Protein–RNA interactions for Protein: Q9H270

VPS11, Vacuolar protein sorting-associated protein 11 homolog, humanhuman

Predictions only

Length 941 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS11Q9H270 PRELID3A-203ENST00000587735 1694 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
VPS11Q9H270 DNAJC28-203ENST00000402202 1480 ntAPPRIS P1 TSL 5 BASIC16.89■□□□□ 0.29
VPS11Q9H270 SIGLEC8-202ENST00000340550 1293 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
VPS11Q9H270 IGHV3-47-201ENST00000425060 335 ntBASIC16.89■□□□□ 0.29
VPS11Q9H270 USHBP1-203ENST00000431146 2136 ntTSL 2 BASIC16.89■□□□□ 0.29
VPS11Q9H270 THAP5-204ENST00000438865 868 ntTSL 2 BASIC16.89■□□□□ 0.29
VPS11Q9H270 AC078883.2-201ENST00000441212 558 ntTSL 3 BASIC16.89■□□□□ 0.29
VPS11Q9H270 EIF5A2-203ENST00000474096 570 ntTSL 4 BASIC16.89■□□□□ 0.29
VPS11Q9H270 ANKRD13D-218ENST00000515828 1111 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
VPS11Q9H270 COX5A-204ENST00000567270 579 ntTSL 3 BASIC16.89■□□□□ 0.29
VPS11Q9H270 FAM57A-205ENST00000572018 373 ntTSL 3 BASIC16.89■□□□□ 0.29
VPS11Q9H270 TMEM220-AS1-202ENST00000580899 561 ntTSL 4 BASIC16.89■□□□□ 0.29
VPS11Q9H270 IL11-204ENST00000590625 1028 ntTSL 2 BASIC16.89■□□□□ 0.29
VPS11Q9H270 COPE-211ENST00000600932 1144 ntTSL 5 BASIC16.89■□□□□ 0.29
VPS11Q9H270 AC114341.1-201ENST00000618070 349 ntBASIC16.89■□□□□ 0.29
VPS11Q9H270 CDK1-204ENST00000448257 1948 ntAPPRIS ALT1 TSL 1 (best) BASIC16.89■□□□□ 0.29
VPS11Q9H270 ADAM9-206ENST00000481513 2387 ntTSL 2 BASIC16.89■□□□□ 0.29
VPS11Q9H270 DACT1-202ENST00000395153 3734 ntAPPRIS ALT2 TSL 5 BASIC16.89■□□□□ 0.29
VPS11Q9H270 CTD-3080P12.3-203ENST00000514376 1757 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
VPS11Q9H270 APLNR-203ENST00000611099 1789 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
VPS11Q9H270 KCNK7-203ENST00000394216 1563 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
VPS11Q9H270 KCNC2-209ENST00000550433 2931 ntAPPRIS ALT2 TSL 1 (best) BASIC16.89■□□□□ 0.29
VPS11Q9H270 ACE-202ENST00000290866 4959 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
VPS11Q9H270 PIGF-201ENST00000281382 1372 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
VPS11Q9H270 ZNF418-208ENST00000599852 2501 ntTSL 2 BASIC16.89■□□□□ 0.29
VPS11Q9H270 KCNT1-214ENST00000631073 3948 ntAPPRIS ALT2 TSL 5 BASIC16.89■□□□□ 0.29
VPS11Q9H270 GHRHR-205ENST00000409904 1613 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
VPS11Q9H270 LINC00895-201ENST00000629028 1637 ntBASIC16.88■□□□□ 0.29
VPS11Q9H270 RFWD2-204ENST00000367669 3033 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
VPS11Q9H270 RIMS1-213ENST00000517960 4428 ntTSL 5 BASIC16.88■□□□□ 0.29
VPS11Q9H270 RIMS1-215ENST00000520567 4442 ntTSL 5 BASIC16.88■□□□□ 0.29
VPS11Q9H270 TINF2-208ENST00000558566 1874 ntAPPRIS ALT2 TSL 2 BASIC16.88■□□□□ 0.29
VPS11Q9H270 XXYLT1-205ENST00000437101 2149 ntTSL 2 BASIC16.88■□□□□ 0.29
VPS11Q9H270 CCDC83-201ENST00000280245 2358 ntAPPRIS P3 TSL 2 BASIC16.88■□□□□ 0.29
VPS11Q9H270 AC025165.1-201ENST00000356672 2355 ntTSL 5 BASIC16.88■□□□□ 0.29
VPS11Q9H270 DAGLB-204ENST00000436575 2385 ntTSL 2 BASIC16.88■□□□□ 0.29
VPS11Q9H270 RWDD4-201ENST00000326397 2641 ntAPPRIS P2 TSL 2 BASIC16.88■□□□□ 0.29
VPS11Q9H270 HNRNPRP1-201ENST00000453465 1695 ntBASIC16.88■□□□□ 0.29
VPS11Q9H270 NAF1-201ENST00000274054 1907 ntAPPRIS P3 TSL 1 (best) BASIC16.88■□□□□ 0.29
VPS11Q9H270 CDC14A-202ENST00000361544 2417 ntAPPRIS P4 TSL 1 (best) BASIC16.88■□□□□ 0.29
VPS11Q9H270 CHN1-205ENST00000409900 2447 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
VPS11Q9H270 CBWD1-202ENST00000356521 1706 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
VPS11Q9H270 WDR74-205ENST00000525752 1724 ntTSL 5 BASIC16.88■□□□□ 0.29
VPS11Q9H270 WDR1-202ENST00000382451 2722 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
VPS11Q9H270 ANKRD26P3-201ENST00000454044 2748 ntBASIC16.88■□□□□ 0.29
VPS11Q9H270 STT3B-201ENST00000295770 4248 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
VPS11Q9H270 SLC46A2-201ENST00000374228 2502 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
VPS11Q9H270 SLC39A13-201ENST00000354884 2289 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
VPS11Q9H270 BET1L-202ENST00000332865 533 ntTSL 5 BASIC16.88■□□□□ 0.29
VPS11Q9H270 MRPL20-201ENST00000344843 721 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
VPS11Q9H270 SMIM11A-202ENST00000399295 1074 ntAPPRIS P1 TSL 2 BASIC16.88■□□□□ 0.29
VPS11Q9H270 PCED1CP-201ENST00000419887 785 ntBASIC16.88■□□□□ 0.29
VPS11Q9H270 LINC00982-205ENST00000420957 435 ntBASIC16.88■□□□□ 0.29
VPS11Q9H270 METTL21A-205ENST00000426075 1051 ntAPPRIS P1 TSL 2 BASIC16.88■□□□□ 0.29
VPS11Q9H270 POLR2M-203ENST00000464277 910 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
VPS11Q9H270 S100A2-206ENST00000497140 697 ntTSL 2 BASIC16.88■□□□□ 0.29
VPS11Q9H270 CSRP1-214ENST00000531916 890 ntTSL 5 BASIC16.88■□□□□ 0.29
VPS11Q9H270 DUX4L17-201ENST00000557360 1267 ntBASIC16.88■□□□□ 0.29
VPS11Q9H270 AC092338.2-202ENST00000567158 611 ntTSL 5 BASIC16.88■□□□□ 0.29
VPS11Q9H270 KISS1R-203ENST00000606939 964 ntTSL 5 BASIC16.88■□□□□ 0.29
VPS11Q9H270 SMIM11B-207ENST00000624758 1074 ntAPPRIS P1 TSL 2 BASIC16.88■□□□□ 0.29
VPS11Q9H270 IRF1-202ENST00000405885 2061 ntAPPRIS P1 TSL 5 BASIC16.88■□□□□ 0.29
VPS11Q9H270 AQP3-201ENST00000297991 1849 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
VPS11Q9H270 RUFY2-205ENST00000454950 2613 ntTSL 2 BASIC16.88■□□□□ 0.29
VPS11Q9H270 AC104640.1-201ENST00000562617 2109 ntBASIC16.88■□□□□ 0.29
VPS11Q9H270 MRFAP1-205ENST00000617365 2112 ntTSL 5 BASIC16.88■□□□□ 0.29
VPS11Q9H270 SCP2-213ENST00000528311 1896 ntTSL 2 BASIC16.88■□□□□ 0.29
VPS11Q9H270 MYB-242ENST00000618728 3545 ntTSL 5 BASIC16.88■□□□□ 0.29
VPS11Q9H270 COLGALT2-201ENST00000361927 5177 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
VPS11Q9H270 FAM237A-203ENST00000543490 1376 ntAPPRIS P1 TSL 5 BASIC16.88■□□□□ 0.29
VPS11Q9H270 POTEE-204ENST00000613282 1926 ntTSL 5 BASIC16.88■□□□□ 0.29
VPS11Q9H270 POTEI-202ENST00000615053 1926 ntTSL 5 BASIC16.88■□□□□ 0.29
VPS11Q9H270 MCF2L2-201ENST00000328913 4980 ntAPPRIS P2 TSL 5 BASIC16.88■□□□□ 0.29
VPS11Q9H270 FAM104A-201ENST00000403627 2798 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
VPS11Q9H270 BCAS3-204ENST00000585744 2203 ntAPPRIS ALT2 TSL 5 BASIC16.88■□□□□ 0.29
VPS11Q9H270 FBXO4-201ENST00000281623 1682 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
VPS11Q9H270 FAM189B-202ENST00000361361 3082 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
VPS11Q9H270 CBSL-201ENST00000398168 2514 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
VPS11Q9H270 AC097376.2-201ENST00000608661 2510 ntTSL 5 BASIC16.88■□□□□ 0.29
VPS11Q9H270 DFFA-201ENST00000377036 1403 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
VPS11Q9H270 CLDN6-202ENST00000396925 1739 ntAPPRIS P1 TSL 5 BASIC16.87■□□□□ 0.29
VPS11Q9H270 NOVA2-201ENST00000263257 7803 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
VPS11Q9H270 MAP2K5-201ENST00000178640 2347 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
VPS11Q9H270 SEPT11-203ENST00000502584 2615 ntAPPRIS ALT1 TSL 5 BASIC16.87■□□□□ 0.29
VPS11Q9H270 FOS-208ENST00000555686 1496 ntTSL 2 BASIC16.87■□□□□ 0.29
VPS11Q9H270 RAB3IP-207ENST00000483530 1755 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
VPS11Q9H270 POLR2A-201ENST00000572844 2083 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
VPS11Q9H270 LITAF-201ENST00000339430 2356 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
VPS11Q9H270 HYMAI-201ENST00000635591 3347 ntBASIC16.87■□□□□ 0.29
VPS11Q9H270 TMEM161A-201ENST00000162044 1820 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
VPS11Q9H270 LINC01657-201ENST00000457217 1809 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
VPS11Q9H270 GPS1-228ENST00000624957 1825 ntAPPRIS ALT1 TSL 5 BASIC16.87■□□□□ 0.29
VPS11Q9H270 PRDM1-203ENST00000369096 5164 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
VPS11Q9H270 TVP23C-201ENST00000225576 1527 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
VPS11Q9H270 QRICH1-201ENST00000357496 3083 ntAPPRIS P1 TSL 2 BASIC16.87■□□□□ 0.29
VPS11Q9H270 NFATC4-210ENST00000554050 3057 ntAPPRIS ALT2 TSL 1 (best) BASIC16.87■□□□□ 0.29
VPS11Q9H270 HHATL-205ENST00000441594 1865 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
VPS11Q9H270 BX276092.9-201ENST00000636797 1563 ntAPPRIS ALT2 TSL 5 BASIC16.87■□□□□ 0.29
VPS11Q9H270 BBS5-201ENST00000295240 3475 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
VPS11Q9H270 PLXNC1-201ENST00000258526 7346 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Retrieved 100 of 98,524 protein–RNA pairs in 42 ms