Protein–RNA interactions for Protein: Q9BU40

CHRDL1, Chordin-like protein 1, humanhuman

Predictions only

Length 450 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHRDL1Q9BU40 ANKRD13D-218ENST00000515828 1111 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
CHRDL1Q9BU40 IL12RB2-205ENST00000541374 3849 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
CHRDL1Q9BU40 MCRIP1-206ENST00000573478 1123 ntTSL 2 BASIC13.38□□□□□ -0.27
CHRDL1Q9BU40 MIR3652-201ENST00000579335 131 ntBASIC13.38□□□□□ -0.27
CHRDL1Q9BU40 IGHV3OR16-7-201ENST00000604106 360 ntBASIC13.38□□□□□ -0.27
CHRDL1Q9BU40 REXO2-220ENST00000611665 1158 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
CHRDL1Q9BU40 HACE1-201ENST00000262903 4576 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
CHRDL1Q9BU40 AL513523.2-202ENST00000427283 2040 ntBASIC13.38□□□□□ -0.27
CHRDL1Q9BU40 LRP8-207ENST00000465675 2670 ntTSL 2 BASIC13.38□□□□□ -0.27
CHRDL1Q9BU40 PSD-201ENST00000020673 4183 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
CHRDL1Q9BU40 THAP8-201ENST00000292894 1825 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
CHRDL1Q9BU40 OR2I1P-209ENST00000641730 5365 ntBASIC13.38□□□□□ -0.27
CHRDL1Q9BU40 PHYH-202ENST00000396913 1732 ntTSL 5 BASIC13.38□□□□□ -0.27
CHRDL1Q9BU40 UBE3B-202ENST00000342494 5722 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
CHRDL1Q9BU40 GCLC-213ENST00000616923 3694 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
CHRDL1Q9BU40 TNFRSF14-AS1-205ENST00000449660 1629 ntTSL 2 BASIC13.38□□□□□ -0.27
CHRDL1Q9BU40 TRIM7-201ENST00000274773 2840 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
CHRDL1Q9BU40 FAM86DP-207ENST00000497543 2152 ntTSL 2 BASIC13.38□□□□□ -0.27
CHRDL1Q9BU40 P2RY6-204ENST00000393592 1515 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
CHRDL1Q9BU40 PCIF1-201ENST00000372409 2747 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
CHRDL1Q9BU40 NCAPH2-203ENST00000395701 2077 ntTSL 2 BASIC13.38□□□□□ -0.27
CHRDL1Q9BU40 MMRN2-201ENST00000372027 4375 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
CHRDL1Q9BU40 FAM222B-211ENST00000582266 2613 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
CHRDL1Q9BU40 FNDC1-201ENST00000297267 6552 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
CHRDL1Q9BU40 KXD1-201ENST00000222307 1426 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
CHRDL1Q9BU40 CABP4-202ENST00000438189 1426 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
CHRDL1Q9BU40 CRB3-203ENST00000598494 1443 ntAPPRIS ALT2 TSL 2 BASIC13.38□□□□□ -0.27
CHRDL1Q9BU40 ARHGAP33-201ENST00000007510 2545 ntAPPRIS ALT2 TSL 5 BASIC13.38□□□□□ -0.27
CHRDL1Q9BU40 SSFA2-205ENST00000431877 5150 ntAPPRIS ALT2 TSL 1 (best) BASIC13.38□□□□□ -0.27
CHRDL1Q9BU40 NDFIP2-201ENST00000218652 4625 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
CHRDL1Q9BU40 HLF-201ENST00000226067 5547 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
CHRDL1Q9BU40 FMNL1-201ENST00000328118 2330 ntTSL 2 BASIC13.38□□□□□ -0.27
CHRDL1Q9BU40 AC026412.1-202ENST00000512335 2231 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
CHRDL1Q9BU40 CDKN1A-204ENST00000448526 2104 ntAPPRIS P1 TSL 3 BASIC13.37□□□□□ -0.27
CHRDL1Q9BU40 NKAIN1-201ENST00000373736 2589 ntAPPRIS P1 TSL 2 BASIC13.37□□□□□ -0.27
CHRDL1Q9BU40 COQ8B-201ENST00000243583 2041 ntAPPRIS ALT2 TSL 1 (best) BASIC13.37□□□□□ -0.27
CHRDL1Q9BU40 PM20D2-201ENST00000275072 4708 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
CHRDL1Q9BU40 INO80-201ENST00000361937 6439 ntAPPRIS P1 TSL 5 BASIC13.37□□□□□ -0.27
CHRDL1Q9BU40 SPATA6-204ENST00000396199 4964 ntTSL 2 BASIC13.37□□□□□ -0.27
CHRDL1Q9BU40 UBE3D-203ENST00000369747 1917 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
CHRDL1Q9BU40 SLC43A2-201ENST00000301335 8136 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
CHRDL1Q9BU40 MAIP1-202ENST00000392290 1386 ntAPPRIS P2 TSL 1 (best) BASIC13.37□□□□□ -0.27
CHRDL1Q9BU40 THAP3-201ENST00000054650 1366 ntAPPRIS ALT2 TSL 1 (best) BASIC13.37□□□□□ -0.27
CHRDL1Q9BU40 C16orf70-208ENST00000569600 1353 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
CHRDL1Q9BU40 HYMAI-201ENST00000635591 3347 ntBASIC13.37□□□□□ -0.27
CHRDL1Q9BU40 REEP1-208ENST00000538924 1702 ntTSL 5 BASIC13.37□□□□□ -0.27
CHRDL1Q9BU40 EPB41-205ENST00000373797 2402 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
CHRDL1Q9BU40 FOXP1-218ENST00000498215 2400 ntAPPRIS P3 TSL 2 BASIC13.37□□□□□ -0.27
CHRDL1Q9BU40 DNAJA3-201ENST00000262375 2763 ntAPPRIS P3 TSL 1 (best) BASIC13.37□□□□□ -0.27
CHRDL1Q9BU40 TRMT44-201ENST00000389737 2799 ntAPPRIS P2 TSL 5 BASIC13.37□□□□□ -0.27
CHRDL1Q9BU40 ID2-202ENST00000331129 623 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
CHRDL1Q9BU40 NEURL2-201ENST00000372518 1278 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
CHRDL1Q9BU40 NCBP2-AS1-201ENST00000447775 562 ntTSL 5 BASIC13.37□□□□□ -0.27
CHRDL1Q9BU40 SIGLEC30P-201ENST00000455569 941 ntBASIC13.37□□□□□ -0.27
CHRDL1Q9BU40 NMU-205ENST00000511469 756 ntTSL 3 BASIC13.37□□□□□ -0.27
CHRDL1Q9BU40 AC004080.2-201ENST00000523331 556 ntTSL 4 BASIC13.37□□□□□ -0.27
CHRDL1Q9BU40 FGFR1OP2-206ENST00000546072 956 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
CHRDL1Q9BU40 TUBA1A-203ENST00000546918 984 ntTSL 3 BASIC13.37□□□□□ -0.27
CHRDL1Q9BU40 ABCD4-228ENST00000557588 763 ntTSL 3 BASIC13.37□□□□□ -0.27
CHRDL1Q9BU40 AP001269.4-201ENST00000609611 512 ntBASIC13.37□□□□□ -0.27
CHRDL1Q9BU40 GHRHR-201ENST00000326139 1602 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
CHRDL1Q9BU40 SULT1A2-204ENST00000533150 1991 ntTSL 2 BASIC13.37□□□□□ -0.27
CHRDL1Q9BU40 C20orf166-AS1-201ENST00000412495 2302 ntTSL 2 BASIC13.37□□□□□ -0.27
CHRDL1Q9BU40 DBNL-213ENST00000452943 1513 ntTSL 2 BASIC13.37□□□□□ -0.27
CHRDL1Q9BU40 HPCAL1-206ENST00000613496 1547 ntAPPRIS P1 TSL 3 BASIC13.37□□□□□ -0.27
CHRDL1Q9BU40 HPN-202ENST00000392226 1783 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
CHRDL1Q9BU40 USP3-AS1-201ENST00000558831 1784 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
CHRDL1Q9BU40 TIMP3-201ENST00000266085 4603 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
CHRDL1Q9BU40 CYP11A1-201ENST00000268053 1934 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
CHRDL1Q9BU40 FGD5-206ENST00000543601 5768 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
CHRDL1Q9BU40 GPR161-202ENST00000367835 2400 ntAPPRIS P1 TSL 2 BASIC13.37□□□□□ -0.27
CHRDL1Q9BU40 LRRC59-201ENST00000225972 2910 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
CHRDL1Q9BU40 APAF1-201ENST00000333991 4539 ntTSL 5 BASIC13.36□□□□□ -0.27
CHRDL1Q9BU40 DNMT3A-205ENST00000402667 2300 ntAPPRIS ALT1 TSL 5 BASIC13.36□□□□□ -0.27
CHRDL1Q9BU40 VPS13B-201ENST00000355155 2822 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
CHRDL1Q9BU40 ASPH-211ENST00000518068 2744 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
CHRDL1Q9BU40 NKIRAS1-208ENST00000443659 2391 ntAPPRIS P2 TSL 5 BASIC13.36□□□□□ -0.27
CHRDL1Q9BU40 RUNX1T1-251ENST00000615601 7372 ntAPPRIS ALT1 TSL 5 BASIC13.36□□□□□ -0.27
CHRDL1Q9BU40 SLC5A2-201ENST00000330498 2271 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
CHRDL1Q9BU40 AC092068.3-201ENST00000587894 2016 ntBASIC13.36□□□□□ -0.27
CHRDL1Q9BU40 AC005915.1-201ENST00000624912 2018 ntBASIC13.36□□□□□ -0.27
CHRDL1Q9BU40 EHD2-202ENST00000538399 1766 ntTSL 2 BASIC13.36□□□□□ -0.27
CHRDL1Q9BU40 GPER1-204ENST00000401670 1542 ntAPPRIS P1 TSL 2 BASIC13.36□□□□□ -0.27
CHRDL1Q9BU40 ADD1-205ENST00000398125 4079 ntTSL 5 BASIC13.36□□□□□ -0.27
CHRDL1Q9BU40 BLOC1S5-202ENST00000397457 2684 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
CHRDL1Q9BU40 FTMT-201ENST00000321339 879 ntAPPRIS P1 BASIC13.36□□□□□ -0.27
CHRDL1Q9BU40 IGLL1-202ENST00000330377 901 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
CHRDL1Q9BU40 SIGLEC8-202ENST00000340550 1293 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
CHRDL1Q9BU40 FOXD3-AS1-201ENST00000418244 941 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
CHRDL1Q9BU40 DECR2-202ENST00000424398 1012 ntTSL 5 BASIC13.36□□□□□ -0.27
CHRDL1Q9BU40 CCDC61-202ENST00000594087 1017 ntAPPRIS ALT2 TSL 5 BASIC13.36□□□□□ -0.27
CHRDL1Q9BU40 COPE-211ENST00000600932 1144 ntTSL 5 BASIC13.36□□□□□ -0.27
CHRDL1Q9BU40 LCE1C-202ENST00000607093 644 ntAPPRIS P2 BASIC13.36□□□□□ -0.27
CHRDL1Q9BU40 AP000547.2-201ENST00000609641 661 ntTSL 5 BASIC13.36□□□□□ -0.27
CHRDL1Q9BU40 AL732292.2-201ENST00000609649 430 ntBASIC13.36□□□□□ -0.27
CHRDL1Q9BU40 GPX4-210ENST00000611653 793 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
CHRDL1Q9BU40 MED16-213ENST00000616387 1078 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
CHRDL1Q9BU40 TRIM39-201ENST00000376656 3338 ntAPPRIS P4 TSL 2 BASIC13.36□□□□□ -0.27
CHRDL1Q9BU40 CDKN2B-AS1-208ENST00000580576 2175 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
CHRDL1Q9BU40 GBGT1-204ENST00000372043 1935 ntTSL 2 BASIC13.36□□□□□ -0.27
Retrieved 100 of 98,524 protein–RNA pairs in 45.2 ms