Protein–RNA interactions for Protein: Q96LX7

CCDC17, Coiled-coil domain-containing protein 17, humanhuman

Predictions only

Length 622 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC17Q96LX7 LIPE-AS1-201ENST00000457234 1501 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
CCDC17Q96LX7 ACYP2-203ENST00000406041 1913 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
CCDC17Q96LX7 CCDC130-204ENST00000586600 1922 ntAPPRIS P1 TSL 5 BASIC19.41■□□□□ 0.7
CCDC17Q96LX7 TRAF3IP1-201ENST00000373327 4279 ntAPPRIS P3 TSL 1 (best) BASIC19.41■□□□□ 0.7
CCDC17Q96LX7 PHC1-212ENST00000543824 4292 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
CCDC17Q96LX7 RASL10B-201ENST00000603017 3205 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
CCDC17Q96LX7 ECHDC1-214ENST00000474289 2443 ntAPPRIS P3 TSL 5 BASIC19.41■□□□□ 0.7
CCDC17Q96LX7 ANKRD6-202ENST00000369408 5258 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
CCDC17Q96LX7 RAB17-204ENST00000409822 1077 ntTSL 5 BASIC19.41■□□□□ 0.7
CCDC17Q96LX7 PTPRVP-202ENST00000490575 953 ntTSL 5 BASIC19.41■□□□□ 0.7
CCDC17Q96LX7 LINC01336-202ENST00000506086 479 ntTSL 5 BASIC19.41■□□□□ 0.7
CCDC17Q96LX7 AC093214.1-201ENST00000511688 1107 ntBASIC19.41■□□□□ 0.7
CCDC17Q96LX7 AC106897.1-201ENST00000512874 394 ntTSL 2 BASIC19.41■□□□□ 0.7
CCDC17Q96LX7 AC069120.2-201ENST00000524091 540 ntBASIC19.41■□□□□ 0.7
CCDC17Q96LX7 AP001107.2-202ENST00000528650 480 ntTSL 3 BASIC19.41■□□□□ 0.7
CCDC17Q96LX7 ZNF667-AS1-204ENST00000588158 921 ntTSL 3 BASIC19.41■□□□□ 0.7
CCDC17Q96LX7 ZNF550-208ENST00000601415 515 ntTSL 4 BASIC19.41■□□□□ 0.7
CCDC17Q96LX7 CNNM3-201ENST00000305510 3447 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
CCDC17Q96LX7 TBX6-203ENST00000553607 2162 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
CCDC17Q96LX7 AP001094.4-201ENST00000579008 2176 ntBASIC19.41■□□□□ 0.7
CCDC17Q96LX7 ABCF3-203ENST00000429586 2624 ntAPPRIS P2 TSL 1 (best) BASIC19.41■□□□□ 0.7
CCDC17Q96LX7 FO538757.1-201ENST00000623083 1397 ntBASIC19.41■□□□□ 0.7
CCDC17Q96LX7 ZNF668-201ENST00000300849 2762 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
CCDC17Q96LX7 TMC6-203ENST00000392467 2833 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
CCDC17Q96LX7 FHL2-201ENST00000322142 1462 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
CCDC17Q96LX7 PRODH-202ENST00000334029 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC19.41■□□□□ 0.7
CCDC17Q96LX7 TMEM25-202ENST00000354064 1965 ntTSL 2 BASIC19.41■□□□□ 0.7
CCDC17Q96LX7 CEP83-AS1-201ENST00000623122 2482 ntBASIC19.41■□□□□ 0.7
CCDC17Q96LX7 SLC43A1-201ENST00000278426 2598 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
CCDC17Q96LX7 PODXL-202ENST00000378555 2105 ntAPPRIS P3 TSL 1 (best) BASIC19.4■□□□□ 0.7
CCDC17Q96LX7 ZFYVE19-203ENST00000355341 2775 ntAPPRIS P3 TSL 1 (best) BASIC19.4■□□□□ 0.7
CCDC17Q96LX7 LMBR1L-204ENST00000547382 2235 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
CCDC17Q96LX7 TMED3-203ENST00000536821 2265 ntTSL 2 BASIC19.4■□□□□ 0.7
CCDC17Q96LX7 KAT7-213ENST00000510819 1769 ntTSL 2 BASIC19.4■□□□□ 0.7
CCDC17Q96LX7 SQOR-208ENST00000568606 1792 ntAPPRIS P1 TSL 5 BASIC19.4■□□□□ 0.7
CCDC17Q96LX7 CDK16-223ENST00000622098 2968 ntTSL 2 BASIC19.4■□□□□ 0.7
CCDC17Q96LX7 ZNF618-203ENST00000374126 3018 ntAPPRIS ALT2 TSL 1 (best) BASIC19.4■□□□□ 0.7
CCDC17Q96LX7 DMRTA2-201ENST00000404795 3137 ntAPPRIS P1 TSL 5 BASIC19.4■□□□□ 0.7
CCDC17Q96LX7 FLVCR1-AS1-201ENST00000356684 2525 ntTSL 2 BASIC19.4■□□□□ 0.7
CCDC17Q96LX7 MRPL2-201ENST00000230413 899 ntTSL 2 BASIC19.4■□□□□ 0.7
CCDC17Q96LX7 OSTC-201ENST00000361564 1077 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
CCDC17Q96LX7 HDAC8-202ENST00000373556 704 ntTSL 2 BASIC19.4■□□□□ 0.7
CCDC17Q96LX7 WDR53-203ENST00000429115 683 ntTSL 2 BASIC19.4■□□□□ 0.7
CCDC17Q96LX7 AC131009.1-201ENST00000539078 426 ntTSL 5 BASIC19.4■□□□□ 0.7
CCDC17Q96LX7 LMO7-AS1-202ENST00000568735 467 ntTSL 3 BASIC19.4■□□□□ 0.7
CCDC17Q96LX7 TIMM13-202ENST00000591871 631 ntTSL 5 BASIC19.4■□□□□ 0.7
CCDC17Q96LX7 AC007967.4-201ENST00000614700 386 ntBASIC19.4■□□□□ 0.7
CCDC17Q96LX7 AJ011932.1-201ENST00000621707 465 ntBASIC19.4■□□□□ 0.7
CCDC17Q96LX7 ERLIN1-203ENST00000421367 5792 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
CCDC17Q96LX7 PACRGL-202ENST00000360916 2073 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
CCDC17Q96LX7 TES-201ENST00000358204 2782 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
CCDC17Q96LX7 EXTL3-201ENST00000220562 6483 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
CCDC17Q96LX7 GJA3-201ENST00000241125 5211 ntAPPRIS P1 TSL 3 BASIC19.4■□□□□ 0.7
CCDC17Q96LX7 UNC5B-201ENST00000335350 6841 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
CCDC17Q96LX7 ALDH3B1-204ENST00000614849 2280 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
CCDC17Q96LX7 AC006538.1-201ENST00000567905 1585 ntBASIC19.4■□□□□ 0.7
CCDC17Q96LX7 B3GNT8-201ENST00000321702 1874 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.7
CCDC17Q96LX7 RASL11B-201ENST00000248706 1995 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.7
CCDC17Q96LX7 SHOX-201ENST00000334060 1951 ntTSL 5 BASIC19.39■□□□□ 0.7
CCDC17Q96LX7 PIGX-202ENST00000392391 3057 ntAPPRIS ALT2 TSL 1 (best) BASIC19.39■□□□□ 0.69
CCDC17Q96LX7 DEF6-201ENST00000316637 2262 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
CCDC17Q96LX7 FKBP2-201ENST00000309366 657 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
CCDC17Q96LX7 TMEM37-202ENST00000409826 794 ntTSL 3 BASIC19.39■□□□□ 0.69
CCDC17Q96LX7 TREML5P-201ENST00000421694 576 ntBASIC19.39■□□□□ 0.69
CCDC17Q96LX7 LINC01983-203ENST00000444346 519 ntTSL 2 BASIC19.39■□□□□ 0.69
CCDC17Q96LX7 SNX21-206ENST00000462307 1043 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
CCDC17Q96LX7 TMEM161B-AS1-202ENST00000501715 1101 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
CCDC17Q96LX7 AP002748.3-201ENST00000527092 828 ntTSL 3 BASIC19.39■□□□□ 0.69
CCDC17Q96LX7 AC008750.1-201ENST00000532473 492 ntTSL 3 BASIC19.39■□□□□ 0.69
CCDC17Q96LX7 MRPL34-202ENST00000594999 555 ntAPPRIS P2 TSL 2 BASIC19.39■□□□□ 0.69
CCDC17Q96LX7 FAHD2B-202ENST00000414820 1388 ntAPPRIS P1 TSL 5 BASIC19.39■□□□□ 0.69
CCDC17Q96LX7 SYVN1-201ENST00000294256 3048 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
CCDC17Q96LX7 GOLGA2P2Y-202ENST00000423852 1506 ntBASIC19.39■□□□□ 0.69
CCDC17Q96LX7 AC105202.1-204ENST00000502167 1781 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
CCDC17Q96LX7 GPAA1P2-202ENST00000606848 1787 ntBASIC19.39■□□□□ 0.69
CCDC17Q96LX7 BIN3-201ENST00000276416 1835 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
CCDC17Q96LX7 ADSL-202ENST00000342312 1808 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
CCDC17Q96LX7 RUNX2-202ENST00000371432 5487 ntAPPRIS ALT2 TSL 5 BASIC19.39■□□□□ 0.69
CCDC17Q96LX7 TINF2-208ENST00000558566 1874 ntAPPRIS ALT2 TSL 2 BASIC19.39■□□□□ 0.69
CCDC17Q96LX7 PTPN20-203ENST00000374342 1929 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
CCDC17Q96LX7 CTSB-232ENST00000534510 1989 ntAPPRIS P1 TSL 5 BASIC19.39■□□□□ 0.69
CCDC17Q96LX7 PTPRO-209ENST00000543886 2070 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
CCDC17Q96LX7 TP73-AS1-203ENST00000423764 2875 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
CCDC17Q96LX7 IL27RA-201ENST00000263379 2962 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
CCDC17Q96LX7 LETM2-201ENST00000297720 1693 ntTSL 2 BASIC19.38■□□□□ 0.69
CCDC17Q96LX7 DDT-201ENST00000350608 671 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
CCDC17Q96LX7 HIST1H4J-201ENST00000355057 373 ntAPPRIS P1 BASIC19.38■□□□□ 0.69
CCDC17Q96LX7 AVPR1B-201ENST00000367126 2237 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
CCDC17Q96LX7 SORCS3-202ENST00000369701 5757 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
CCDC17Q96LX7 HIST1H2AC-202ENST00000377791 1654 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
CCDC17Q96LX7 MRPL28-202ENST00000389675 865 ntAPPRIS P1 TSL 3 BASIC19.38■□□□□ 0.69
CCDC17Q96LX7 AKT1S1-207ENST00000391835 3075 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
CCDC17Q96LX7 BAX-206ENST00000415969 540 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
CCDC17Q96LX7 AC124057.1-201ENST00000433035 404 ntTSL 5 BASIC19.38■□□□□ 0.69
CCDC17Q96LX7 PAEP-208ENST00000479141 990 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
CCDC17Q96LX7 AC097493.3-201ENST00000509725 367 ntBASIC19.38■□□□□ 0.69
CCDC17Q96LX7 CHID1-215ENST00000528581 1431 ntTSL 2 BASIC19.38■□□□□ 0.69
CCDC17Q96LX7 PACS1-209ENST00000529757 1688 ntAPPRIS ALT2 TSL 1 (best) BASIC19.38■□□□□ 0.69
CCDC17Q96LX7 AC004771.3-201ENST00000574260 551 ntTSL 4 BASIC19.38■□□□□ 0.69
CCDC17Q96LX7 DM1-AS-201ENST00000586251 483 ntTSL 2 BASIC19.38■□□□□ 0.69
Retrieved 100 of 98,524 protein–RNA pairs in 47.2 ms