Protein–RNA interactions for Protein: Q96GM5

SMARCD1, SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily D member 1, humanhuman

Predictions only

Length 515 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCD1Q96GM5 SSBP3-205ENST00000417664 1666 ntTSL 5 BASIC17.56■□□□□ 0.4
SMARCD1Q96GM5 ROPN1L-201ENST00000274134 1066 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
SMARCD1Q96GM5 H2AFZ-201ENST00000296417 979 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
SMARCD1Q96GM5 PRORY-201ENST00000382764 878 ntAPPRIS P1 TSL 5 BASIC17.56■□□□□ 0.4
SMARCD1Q96GM5 CXCL1-201ENST00000395761 1097 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
SMARCD1Q96GM5 AL109613.1-202ENST00000427243 639 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
SMARCD1Q96GM5 AC069503.2-201ENST00000546333 576 ntAPPRIS P1 TSL 5 BASIC17.56■□□□□ 0.4
SMARCD1Q96GM5 RNF34-208ENST00000555076 593 ntTSL 3 BASIC17.56■□□□□ 0.4
SMARCD1Q96GM5 METTL23-202ENST00000586200 465 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
SMARCD1Q96GM5 AC024592.3-202ENST00000586349 506 ntTSL 2 BASIC17.56■□□□□ 0.4
SMARCD1Q96GM5 SEC11C-205ENST00000588875 718 ntTSL 2 BASIC17.56■□□□□ 0.4
SMARCD1Q96GM5 METTL23-212ENST00000590964 1006 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
SMARCD1Q96GM5 AC078925.2-201ENST00000624013 1973 ntBASIC17.56■□□□□ 0.4
SMARCD1Q96GM5 TNIP1-208ENST00000520931 2680 ntAPPRIS ALT2 TSL 1 (best) BASIC17.56■□□□□ 0.4
SMARCD1Q96GM5 ZFAND6-211ENST00000559157 1559 ntTSL 2 BASIC17.56■□□□□ 0.4
SMARCD1Q96GM5 NEURL1B-201ENST00000369800 6424 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
SMARCD1Q96GM5 KRT8-201ENST00000293308 1882 ntAPPRIS P1 TSL 5 BASIC17.56■□□□□ 0.4
SMARCD1Q96GM5 PKP3-201ENST00000331563 2809 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
SMARCD1Q96GM5 NFASC-205ENST00000403080 2462 ntTSL 2 BASIC17.56■□□□□ 0.4
SMARCD1Q96GM5 RBM4-204ENST00000408993 1763 ntAPPRIS P1 TSL 5 BASIC17.56■□□□□ 0.4
SMARCD1Q96GM5 PLCB2-201ENST00000260402 4616 ntAPPRIS P3 TSL 2 BASIC17.56■□□□□ 0.4
SMARCD1Q96GM5 NEK3-206ENST00000611833 2345 ntAPPRIS ALT2 TSL 5 BASIC17.55■□□□□ 0.4
SMARCD1Q96GM5 SYNE3-202ENST00000553340 2615 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
SMARCD1Q96GM5 NLRP6-203ENST00000534750 2936 ntAPPRIS ALT2 TSL 2 BASIC17.55■□□□□ 0.4
SMARCD1Q96GM5 SEPT2-245ENST00000616972 3446 ntTSL 2 BASIC17.55■□□□□ 0.4
SMARCD1Q96GM5 PTPA-223ENST00000452489 2526 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
SMARCD1Q96GM5 OPCML-202ENST00000374778 1302 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
SMARCD1Q96GM5 TMEM225B-202ENST00000431679 1314 ntAPPRIS P1 TSL 5 BASIC17.55■□□□□ 0.4
SMARCD1Q96GM5 SPAST-202ENST00000345662 5116 ntAPPRIS ALT1 TSL 1 (best) BASIC17.55■□□□□ 0.4
SMARCD1Q96GM5 FICD-204ENST00000552695 3347 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
SMARCD1Q96GM5 CERCAM-213ENST00000612334 1554 ntAPPRIS ALT2 TSL 5 BASIC17.55■□□□□ 0.4
SMARCD1Q96GM5 ELF3-201ENST00000359651 4994 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
SMARCD1Q96GM5 MPV17L-201ENST00000287594 5820 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
SMARCD1Q96GM5 CD37-201ENST00000323906 1265 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
SMARCD1Q96GM5 ITLN1-201ENST00000326245 1183 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
SMARCD1Q96GM5 LGMN-202ENST00000393218 2115 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
SMARCD1Q96GM5 CBX7-202ENST00000401405 784 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
SMARCD1Q96GM5 IL32-206ENST00000440815 920 ntAPPRIS P4 TSL 2 BASIC17.55■□□□□ 0.4
SMARCD1Q96GM5 AL592309.1-201ENST00000443127 649 ntBASIC17.55■□□□□ 0.4
SMARCD1Q96GM5 IL32-207ENST00000444393 892 ntAPPRIS P4 TSL 2 BASIC17.55■□□□□ 0.4
SMARCD1Q96GM5 RPS27L-204ENST00000455271 923 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
SMARCD1Q96GM5 AC009163.2-201ENST00000460606 2125 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
SMARCD1Q96GM5 CCDC112-205ENST00000506442 2145 ntAPPRIS ALT2 TSL 2 BASIC17.55■□□□□ 0.4
SMARCD1Q96GM5 SERF1A-207ENST00000512649 846 ntTSL 2 BASIC17.55■□□□□ 0.4
SMARCD1Q96GM5 AC019257.1-202ENST00000521498 445 ntTSL 5 BASIC17.55■□□□□ 0.4
SMARCD1Q96GM5 IL32-219ENST00000531965 746 ntAPPRIS ALT2 TSL 1 (best) BASIC17.55■□□□□ 0.4
SMARCD1Q96GM5 IL32-223ENST00000534507 1112 ntAPPRIS ALT2 TSL 2 BASIC17.55■□□□□ 0.4
SMARCD1Q96GM5 IL32-226ENST00000548476 1014 ntAPPRIS ALT2 TSL 2 BASIC17.55■□□□□ 0.4
SMARCD1Q96GM5 IL32-227ENST00000548652 812 ntAPPRIS ALT2 TSL 3 BASIC17.55■□□□□ 0.4
SMARCD1Q96GM5 TMEM97-205ENST00000583381 578 ntTSL 4 BASIC17.55■□□□□ 0.4
SMARCD1Q96GM5 METTL23-203ENST00000586738 1059 ntTSL 5 BASIC17.55■□□□□ 0.4
SMARCD1Q96GM5 METTL23-205ENST00000588302 925 ntTSL 5 BASIC17.55■□□□□ 0.4
SMARCD1Q96GM5 AC027612.4-201ENST00000605371 583 ntBASIC17.55■□□□□ 0.4
SMARCD1Q96GM5 CU104787.1-201ENST00000624155 288 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
SMARCD1Q96GM5 TMEM138-201ENST00000278826 1848 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
SMARCD1Q96GM5 NQO2-201ENST00000338130 1515 ntAPPRIS P1 TSL 2 BASIC17.55■□□□□ 0.4
SMARCD1Q96GM5 SDCBP2-202ENST00000360779 1519 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
SMARCD1Q96GM5 MAGEA4-206ENST00000393921 1727 ntAPPRIS P1 TSL 5 BASIC17.55■□□□□ 0.4
SMARCD1Q96GM5 CACNA1B-205ENST00000371363 9758 ntAPPRIS ALT2 TSL 5 BASIC17.55■□□□□ 0.4
SMARCD1Q96GM5 MFSD2A-201ENST00000372809 2173 ntTSL 2 BASIC17.55■□□□□ 0.4
SMARCD1Q96GM5 PARP15-202ENST00000464300 2156 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
SMARCD1Q96GM5 RNF216P1-203ENST00000404404 2427 ntBASIC17.55■□□□□ 0.4
SMARCD1Q96GM5 CACNA1A-215ENST00000635727 7536 ntAPPRIS ALT2 TSL 5 BASIC17.55■□□□□ 0.4
SMARCD1Q96GM5 AXIN1-201ENST00000262320 3643 ntAPPRIS P4 TSL 1 (best) BASIC17.54■□□□□ 0.4
SMARCD1Q96GM5 CSRNP1-201ENST00000273153 3148 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
SMARCD1Q96GM5 APH1A-202ENST00000360244 2353 ntAPPRIS ALT1 TSL 1 (best) BASIC17.54■□□□□ 0.4
SMARCD1Q96GM5 ACSM2A-213ENST00000575690 2322 ntAPPRIS P1 TSL 2 BASIC17.54■□□□□ 0.4
SMARCD1Q96GM5 C17orf62-201ENST00000306645 2093 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
SMARCD1Q96GM5 MIB2-201ENST00000355826 3290 ntAPPRIS ALT2 TSL 1 (best) BASIC17.54■□□□□ 0.4
SMARCD1Q96GM5 GNRHR2-201ENST00000312753 1599 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
SMARCD1Q96GM5 HOXA10-202ENST00000396344 1570 ntAPPRIS ALT1 TSL 1 (best) BASIC17.54■□□□□ 0.4
SMARCD1Q96GM5 MAP3K8-207ENST00000542547 2782 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
SMARCD1Q96GM5 ING5-201ENST00000313552 5196 ntAPPRIS P3 TSL 1 (best) BASIC17.54■□□□□ 0.4
SMARCD1Q96GM5 OPRK1-205ENST00000612786 5196 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
SMARCD1Q96GM5 SLC7A2-205ENST00000522656 2274 ntAPPRIS ALT1 TSL 1 (best) BASIC17.54■□□□□ 0.4
SMARCD1Q96GM5 KLHDC7B-201ENST00000395676 2991 ntAPPRIS P1 BASIC17.54■□□□□ 0.4
SMARCD1Q96GM5 ATP10A-201ENST00000356865 6680 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
SMARCD1Q96GM5 LPAR5-202ENST00000431922 2695 ntAPPRIS P1 TSL 2 BASIC17.54■□□□□ 0.4
SMARCD1Q96GM5 CRELD1-201ENST00000326434 1994 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
SMARCD1Q96GM5 ADAMTS4-201ENST00000367995 1961 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
SMARCD1Q96GM5 PCBP3-204ENST00000400309 1986 ntAPPRIS ALT2 TSL 5 BASIC17.54■□□□□ 0.4
SMARCD1Q96GM5 DPM2-202ENST00000373110 738 ntTSL 2 BASIC17.54■□□□□ 0.4
SMARCD1Q96GM5 CTRC-202ENST00000375949 898 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
SMARCD1Q96GM5 SPCS2P4-201ENST00000436160 681 ntBASIC17.54■□□□□ 0.4
SMARCD1Q96GM5 PP7080-203ENST00000510604 859 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
SMARCD1Q96GM5 IGHV3-62-201ENST00000520057 340 ntBASIC17.54■□□□□ 0.4
SMARCD1Q96GM5 GALNT9-208ENST00000541995 1001 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
SMARCD1Q96GM5 TVP23B-206ENST00000574226 1080 ntAPPRIS ALT1 TSL 1 (best) BASIC17.54■□□□□ 0.4
SMARCD1Q96GM5 CIRBP-204ENST00000585630 870 ntAPPRIS P3 TSL 3 BASIC17.54■□□□□ 0.4
SMARCD1Q96GM5 FHAD1-205ENST00000375997 1459 ntTSL 3 BASIC17.54■□□□□ 0.4
SMARCD1Q96GM5 ATG2A-203ENST00000421419 1481 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
SMARCD1Q96GM5 RNF222-201ENST00000344001 2786 ntAPPRIS P1 BASIC17.54■□□□□ 0.4
SMARCD1Q96GM5 AC022211.2-201ENST00000585075 2527 ntBASIC17.54■□□□□ 0.4
SMARCD1Q96GM5 DEF6-201ENST00000316637 2262 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
SMARCD1Q96GM5 SERPINB6-201ENST00000335686 1604 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
SMARCD1Q96GM5 SLC35G1-202ENST00000427197 2402 ntAPPRIS ALT2 TSL 1 (best) BASIC17.53■□□□□ 0.4
SMARCD1Q96GM5 PDXP-202ENST00000403251 1571 ntTSL 2 BASIC17.53■□□□□ 0.4
SMARCD1Q96GM5 SIRT1-201ENST00000212015 4094 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
SMARCD1Q96GM5 VPS51-201ENST00000279281 2714 ntAPPRIS P2 TSL 1 (best) BASIC17.53■□□□□ 0.4
SMARCD1Q96GM5 MAP4K2-202ENST00000377350 2931 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
Retrieved 100 of 98,524 protein–RNA pairs in 47.6 ms