Protein–RNA interactions for Protein: Q8TDI0

CHD5, Chromodomain-helicase-DNA-binding protein 5, humanhuman

Predictions only

Length 1,954 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHD5Q8TDI0 SDCBP2-202ENST00000360779 1519 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
CHD5Q8TDI0 PLTP-204ENST00000420868 1420 ntTSL 2 BASIC16.79■□□□□ 0.28
CHD5Q8TDI0 YAP1-211ENST00000629586 1365 ntTSL 5 BASIC16.79■□□□□ 0.28
CHD5Q8TDI0 AL135791.1-201ENST00000429214 826 ntTSL 5 BASIC16.78■□□□□ 0.28
CHD5Q8TDI0 AL671277.1-201ENST00000429656 993 ntBASIC16.78■□□□□ 0.28
CHD5Q8TDI0 AP001471.1-201ENST00000454245 672 ntTSL 3 BASIC16.78■□□□□ 0.28
CHD5Q8TDI0 NDUFB2-202ENST00000460088 420 ntTSL 3 BASIC16.78■□□□□ 0.28
CHD5Q8TDI0 KRT8P23-201ENST00000560090 1207 ntBASIC16.78■□□□□ 0.28
CHD5Q8TDI0 PARD3-201ENST00000340077 3518 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
CHD5Q8TDI0 SRRM2-201ENST00000301740 9353 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
CHD5Q8TDI0 P4HA2-201ENST00000166534 2230 ntAPPRIS P3 TSL 1 (best) BASIC16.78■□□□□ 0.28
CHD5Q8TDI0 RNF157-202ENST00000319945 2937 ntAPPRIS ALT2 TSL 2 BASIC16.78■□□□□ 0.28
CHD5Q8TDI0 GPS1-202ENST00000320548 1949 ntTSL 2 BASIC16.78■□□□□ 0.28
CHD5Q8TDI0 ZNF623-201ENST00000458270 2733 ntAPPRIS ALT2 TSL 1 (best) BASIC16.78■□□□□ 0.28
CHD5Q8TDI0 EIF2B4-212ENST00000622434 1771 ntTSL 5 BASIC16.78■□□□□ 0.28
CHD5Q8TDI0 ZSWIM4-201ENST00000254323 4339 ntAPPRIS P1 TSL 2 BASIC16.78■□□□□ 0.28
CHD5Q8TDI0 C1orf43-201ENST00000350592 1610 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
CHD5Q8TDI0 ALMS1P1-202ENST00000450720 1601 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
CHD5Q8TDI0 YTHDF3-215ENST00000621957 2387 ntAPPRIS ALT1 TSL 5 BASIC16.78■□□□□ 0.28
CHD5Q8TDI0 HMBS-209ENST00000537841 1559 ntTSL 5 BASIC16.78■□□□□ 0.28
CHD5Q8TDI0 AP3S2-216ENST00000617003 1561 ntBASIC16.78■□□□□ 0.28
CHD5Q8TDI0 IGFBP3-203ENST00000381086 2322 ntTSL 2 BASIC16.78■□□□□ 0.28
CHD5Q8TDI0 SPOP-201ENST00000347630 2965 ntAPPRIS P1 TSL 5 BASIC16.78■□□□□ 0.28
CHD5Q8TDI0 CDC25B-204ENST00000379598 2990 ntTSL 2 BASIC16.78■□□□□ 0.28
CHD5Q8TDI0 MFNG-201ENST00000356998 2088 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
CHD5Q8TDI0 AC105339.1-201ENST00000440089 1362 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
CHD5Q8TDI0 ETNK1-202ENST00000335148 1083 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
CHD5Q8TDI0 NKIRAS1-204ENST00000416026 795 ntAPPRIS P2 TSL 3 BASIC16.78■□□□□ 0.28
CHD5Q8TDI0 NDUFAF5-203ENST00000463598 991 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
CHD5Q8TDI0 KAT2A-201ENST00000225916 3109 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
CHD5Q8TDI0 SRPX-201ENST00000378533 1874 ntAPPRIS P3 TSL 1 (best) BASIC16.78■□□□□ 0.28
CHD5Q8TDI0 CES4A-206ENST00000540579 1825 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
CHD5Q8TDI0 ADAM8-205ENST00000485491 2441 ntTSL 2 BASIC16.78■□□□□ 0.28
CHD5Q8TDI0 CARNS1-202ENST00000445895 3971 ntAPPRIS P1 TSL 5 BASIC16.78■□□□□ 0.28
CHD5Q8TDI0 GOLGA2P3Y-201ENST00000416946 1653 ntBASIC16.78■□□□□ 0.28
CHD5Q8TDI0 SCAMP4-201ENST00000316097 2684 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
CHD5Q8TDI0 TNFAIP2-201ENST00000333007 4175 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
CHD5Q8TDI0 NUP50-203ENST00000407019 2059 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
CHD5Q8TDI0 DCAF12L2-201ENST00000360028 2599 ntAPPRIS P1 BASIC16.78■□□□□ 0.28
CHD5Q8TDI0 LIPE-AS1-201ENST00000457234 1501 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
CHD5Q8TDI0 CD1E-212ENST00000368167 1458 ntAPPRIS P4 TSL 1 (best) BASIC16.77■□□□□ 0.28
CHD5Q8TDI0 PIKFYVE-204ENST00000407449 1898 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
CHD5Q8TDI0 ROPN1L-201ENST00000274134 1066 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
CHD5Q8TDI0 VCX-202ENST00000381059 967 ntAPPRIS P2 TSL 1 (best) BASIC16.77■□□□□ 0.28
CHD5Q8TDI0 HMGN1P19-201ENST00000436976 333 ntBASIC16.77■□□□□ 0.28
CHD5Q8TDI0 AC007364.1-201ENST00000449714 1022 ntTSL 2 BASIC16.77■□□□□ 0.28
CHD5Q8TDI0 MLF1-210ENST00000484955 1247 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
CHD5Q8TDI0 GATD1-206ENST00000526325 756 ntTSL 5 BASIC16.77■□□□□ 0.28
CHD5Q8TDI0 Z97055.2-201ENST00000563715 859 ntTSL 3 BASIC16.77■□□□□ 0.28
CHD5Q8TDI0 AL365330.1-201ENST00000607459 531 ntBASIC16.77■□□□□ 0.28
CHD5Q8TDI0 PHOSPHO2-207ENST00000616524 1253 ntAPPRIS P1 TSL 3 BASIC16.77■□□□□ 0.28
CHD5Q8TDI0 TAF1B-201ENST00000263663 2387 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
CHD5Q8TDI0 SARDH-205ENST00000422262 2367 ntTSL 5 BASIC16.77■□□□□ 0.28
CHD5Q8TDI0 BMP4-201ENST00000245451 1917 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
CHD5Q8TDI0 ALOX12P2-203ENST00000570921 1945 ntBASIC16.77■□□□□ 0.28
CHD5Q8TDI0 GPER1-206ENST00000617001 1900 ntTSL 5 BASIC16.77■□□□□ 0.28
CHD5Q8TDI0 TBRG4-203ENST00000395655 2225 ntTSL 2 BASIC16.77■□□□□ 0.28
CHD5Q8TDI0 FHL2-201ENST00000322142 1462 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
CHD5Q8TDI0 FBXL12-206ENST00000588922 1843 ntTSL 2 BASIC16.77■□□□□ 0.27
CHD5Q8TDI0 FDX1-201ENST00000260270 3206 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
CHD5Q8TDI0 HEPN1-201ENST00000408930 1434 ntAPPRIS P1 BASIC16.77■□□□□ 0.27
CHD5Q8TDI0 AC005052.1-201ENST00000625181 2492 ntBASIC16.77■□□□□ 0.27
CHD5Q8TDI0 FAM120AOS-201ENST00000375412 2771 ntAPPRIS P3 TSL 1 (best) BASIC16.77■□□□□ 0.27
CHD5Q8TDI0 F7-201ENST00000346342 2409 ntAPPRIS ALT2 TSL 1 (best) BASIC16.77■□□□□ 0.27
CHD5Q8TDI0 REL-202ENST00000394479 2398 ntAPPRIS ALT2 TSL 1 (best) BASIC16.77■□□□□ 0.27
CHD5Q8TDI0 RAI14-201ENST00000265109 5092 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
CHD5Q8TDI0 N4BP2L1-210ENST00000613078 2032 ntTSL 5 BASIC16.77■□□□□ 0.27
CHD5Q8TDI0 HNRNPD-201ENST00000313899 3033 ntAPPRIS P4 TSL 1 (best) BASIC16.77■□□□□ 0.27
CHD5Q8TDI0 SNED1-202ENST00000342631 1930 ntTSL 1 (best) BASIC16.77■□□□□ 0.27
CHD5Q8TDI0 ITGB2-204ENST00000397846 422 ntTSL 2 BASIC16.77■□□□□ 0.27
CHD5Q8TDI0 SPDYE14P-201ENST00000442619 822 ntBASIC16.77■□□□□ 0.27
CHD5Q8TDI0 LAMTOR4-206ENST00000473459 720 ntTSL 2 BASIC16.77■□□□□ 0.27
CHD5Q8TDI0 RAB7A-204ENST00000483906 533 ntTSL 3 BASIC16.77■□□□□ 0.27
CHD5Q8TDI0 PTPRVP-202ENST00000490575 953 ntTSL 5 BASIC16.77■□□□□ 0.27
CHD5Q8TDI0 AC024230.1-201ENST00000511431 889 ntTSL 3 BASIC16.77■□□□□ 0.27
CHD5Q8TDI0 UBE2Q2L-201ENST00000558195 498 ntAPPRIS P1 TSL 2 BASIC16.77■□□□□ 0.27
CHD5Q8TDI0 QPRT-203ENST00000562473 579 ntTSL 3 BASIC16.77■□□□□ 0.27
CHD5Q8TDI0 NDUFAB1-205ENST00000570319 885 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
CHD5Q8TDI0 AC007192.2-201ENST00000600364 463 ntTSL 5 BASIC16.77■□□□□ 0.27
CHD5Q8TDI0 Z92544.3-201ENST00000624747 417 ntBASIC16.77■□□□□ 0.27
CHD5Q8TDI0 DYNC1I1-212ENST00000630942 2249 ntTSL 2 BASIC16.77■□□□□ 0.27
CHD5Q8TDI0 PI16-201ENST00000373674 2190 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
CHD5Q8TDI0 SENP6-202ENST00000370010 4644 ntAPPRIS P3 TSL 1 (best) BASIC16.76■□□□□ 0.27
CHD5Q8TDI0 SLC52A1-202ENST00000424747 2412 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
CHD5Q8TDI0 LDLRAP1-201ENST00000374338 2940 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
CHD5Q8TDI0 WDR45-201ENST00000322995 1444 ntTSL 5 BASIC16.76■□□□□ 0.27
CHD5Q8TDI0 PROSER2-201ENST00000277570 3333 ntAPPRIS P2 TSL 1 (best) BASIC16.76■□□□□ 0.27
CHD5Q8TDI0 CHAT-201ENST00000337653 2458 ntAPPRIS P4 TSL 1 (best) BASIC16.76■□□□□ 0.27
CHD5Q8TDI0 CYP46A1-201ENST00000261835 2181 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
CHD5Q8TDI0 PCK2-205ENST00000558096 2433 ntTSL 2 BASIC16.76■□□□□ 0.27
CHD5Q8TDI0 RCAN3-210ENST00000618490 2386 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
CHD5Q8TDI0 RAB37-208ENST00000402449 1560 ntAPPRIS P3 TSL 2 BASIC16.76■□□□□ 0.27
CHD5Q8TDI0 LINC00313-201ENST00000332440 579 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
CHD5Q8TDI0 NKAIN2-201ENST00000368416 1106 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
CHD5Q8TDI0 AC078942.1-201ENST00000448698 589 ntTSL 4 BASIC16.76■□□□□ 0.27
CHD5Q8TDI0 SLC25A36-204ENST00000453248 1040 ntTSL 2 BASIC16.76■□□□□ 0.27
CHD5Q8TDI0 AGGF1-204ENST00000506806 1142 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
CHD5Q8TDI0 HNRNPDL-206ENST00000602300 1291 ntAPPRIS ALT2 TSL 1 (best) BASIC16.76■□□□□ 0.27
CHD5Q8TDI0 UXT-AS1-201ENST00000590504 1525 ntBASIC16.76■□□□□ 0.27
CHD5Q8TDI0 IRAK1-204ENST00000393687 2049 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
Retrieved 100 of 98,524 protein–RNA pairs in 39 ms