Protein–RNA interactions for Protein: Q8N9R6

CDRT4, CMT1A duplicated region transcript 4 protein, humanhuman

Predictions only

Length 151 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDRT4Q8N9R6 AL645728.2-201ENST00000641974 660 ntBASIC15.55■□□□□ 0.08
CDRT4Q8N9R6 PLXNB3-201ENST00000361971 6146 ntAPPRIS P3 TSL 1 (best) BASIC15.55■□□□□ 0.08
CDRT4Q8N9R6 ADGRB2-203ENST00000398538 4675 ntAPPRIS ALT2 TSL 5 BASIC15.55■□□□□ 0.08
CDRT4Q8N9R6 SLC43A3-203ENST00000395124 2617 ntAPPRIS P3 TSL 1 (best) BASIC15.55■□□□□ 0.08
CDRT4Q8N9R6 FAM222B-211ENST00000582266 2613 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
CDRT4Q8N9R6 CYMP-AS1-201ENST00000457402 2351 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
CDRT4Q8N9R6 VIPR2-201ENST00000262178 3944 ntAPPRIS P2 TSL 1 (best) BASIC15.55■□□□□ 0.08
CDRT4Q8N9R6 STC2-201ENST00000265087 5353 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
CDRT4Q8N9R6 PITPNA-202ENST00000539476 3612 ntAPPRIS ALT1 TSL 5 BASIC15.55■□□□□ 0.08
CDRT4Q8N9R6 NBL1-210ENST00000615215 2160 ntAPPRIS ALT2 TSL 1 (best) BASIC15.55■□□□□ 0.08
CDRT4Q8N9R6 SH3BP4-201ENST00000344528 5044 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
CDRT4Q8N9R6 CCDC43-202ENST00000457422 2058 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
CDRT4Q8N9R6 SLC9A3P2-201ENST00000447821 2021 ntBASIC15.55■□□□□ 0.08
CDRT4Q8N9R6 TMEM25-202ENST00000354064 1965 ntTSL 2 BASIC15.55■□□□□ 0.08
CDRT4Q8N9R6 FGFR3-208ENST00000481110 4217 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
CDRT4Q8N9R6 HOXA5-201ENST00000222726 1657 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
CDRT4Q8N9R6 GGT3P-204ENST00000453783 1664 ntBASIC15.54■□□□□ 0.08
CDRT4Q8N9R6 FUT2-201ENST00000391876 1593 ntAPPRIS P1 TSL 2 BASIC15.54■□□□□ 0.08
CDRT4Q8N9R6 BMP3-201ENST00000282701 5734 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
CDRT4Q8N9R6 SLC29A2-202ENST00000357440 2514 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
CDRT4Q8N9R6 SLC29A2-205ENST00000544554 2505 ntAPPRIS P1 TSL 2 BASIC15.54■□□□□ 0.08
CDRT4Q8N9R6 ZMIZ1-201ENST00000334512 7546 ntAPPRIS P1 TSL 5 BASIC15.54■□□□□ 0.08
CDRT4Q8N9R6 STARD3NL-204ENST00000434197 1341 ntTSL 5 BASIC15.54■□□□□ 0.08
CDRT4Q8N9R6 LAMTOR5-201ENST00000256644 868 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
CDRT4Q8N9R6 TSPY2-201ENST00000320701 1161 ntAPPRIS P5 TSL 1 (best) BASIC15.54■□□□□ 0.08
CDRT4Q8N9R6 SERF1B-202ENST00000380751 703 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
CDRT4Q8N9R6 TSPY2-203ENST00000429039 779 ntAPPRIS ALT2 TSL 2 BASIC15.54■□□□□ 0.08
CDRT4Q8N9R6 LAMTOR5-204ENST00000483260 694 ntTSL 2 BASIC15.54■□□□□ 0.08
CDRT4Q8N9R6 POLD4-207ENST00000531239 584 ntTSL 2 BASIC15.54■□□□□ 0.08
CDRT4Q8N9R6 OVCA2-201ENST00000572195 1122 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
CDRT4Q8N9R6 MIEN1-205ENST00000577810 806 ntTSL 3 BASIC15.54■□□□□ 0.08
CDRT4Q8N9R6 LAMTOR5-206ENST00000602318 634 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
CDRT4Q8N9R6 LINC01128-210ENST00000609139 455 ntTSL 3 BASIC15.54■□□□□ 0.08
CDRT4Q8N9R6 SCUBE2-202ENST00000450649 2912 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
CDRT4Q8N9R6 SHTN1-202ENST00000355371 5361 ntAPPRIS ALT1 TSL 2 BASIC15.54■□□□□ 0.08
CDRT4Q8N9R6 ORMDL1-203ENST00000392350 2009 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
CDRT4Q8N9R6 LINC02370-201ENST00000428272 2009 ntTSL 5 BASIC15.54■□□□□ 0.08
CDRT4Q8N9R6 SCAP-201ENST00000265565 4394 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
CDRT4Q8N9R6 ZNF133-204ENST00000396026 2717 ntAPPRIS P3 TSL 3 BASIC15.54■□□□□ 0.08
CDRT4Q8N9R6 EPN2-201ENST00000314728 4871 ntAPPRIS P4 TSL 1 (best) BASIC15.54■□□□□ 0.08
CDRT4Q8N9R6 UBE2R2-201ENST00000263228 4075 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
CDRT4Q8N9R6 CD1E-213ENST00000444681 1820 ntAPPRIS ALT2 TSL 1 (best) BASIC15.54■□□□□ 0.08
CDRT4Q8N9R6 CHRNE-201ENST00000293780 2455 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
CDRT4Q8N9R6 CENPN-202ENST00000305850 2481 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
CDRT4Q8N9R6 SPRYD7-202ENST00000378195 3086 ntTSL 2 BASIC15.54■□□□□ 0.08
CDRT4Q8N9R6 PPA2-201ENST00000341695 1684 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
CDRT4Q8N9R6 AC099508.1-201ENST00000499110 1666 ntTSL 4 BASIC15.54■□□□□ 0.08
CDRT4Q8N9R6 SERPINB6-201ENST00000335686 1604 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
CDRT4Q8N9R6 ITGB1BP1-204ENST00000360635 4859 ntAPPRIS P1 TSL 5 BASIC15.54■□□□□ 0.08
CDRT4Q8N9R6 FAM208B-201ENST00000328090 8626 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
CDRT4Q8N9R6 SLC3A2-203ENST00000377890 2161 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
CDRT4Q8N9R6 AL031731.1-201ENST00000642131 2094 ntBASIC15.53■□□□□ 0.08
CDRT4Q8N9R6 DUSP18-206ENST00000407308 1978 ntAPPRIS P1 TSL 5 BASIC15.53■□□□□ 0.08
CDRT4Q8N9R6 GRAMD1A-202ENST00000411896 2523 ntAPPRIS ALT2 TSL 2 BASIC15.53■□□□□ 0.08
CDRT4Q8N9R6 FUT5-201ENST00000252675 1916 ntAPPRIS P1 BASIC15.53■□□□□ 0.08
CDRT4Q8N9R6 HSPA1A-201ENST00000375651 2483 ntAPPRIS P1 BASIC15.53■□□□□ 0.08
CDRT4Q8N9R6 AC093627.6-201ENST00000478759 1365 ntTSL 5 BASIC15.53■□□□□ 0.08
CDRT4Q8N9R6 LINC00200-201ENST00000425630 2434 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
CDRT4Q8N9R6 SDR16C5-201ENST00000303749 1840 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
CDRT4Q8N9R6 CES4A-206ENST00000540579 1825 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
CDRT4Q8N9R6 NDUFA3-201ENST00000303553 379 ntTSL 2 BASIC15.53■□□□□ 0.08
CDRT4Q8N9R6 SNHG5-201ENST00000369605 1032 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
CDRT4Q8N9R6 HCG4B-203ENST00000450128 991 ntBASIC15.53■□□□□ 0.08
CDRT4Q8N9R6 AL513480.1-201ENST00000451731 511 ntBASIC15.53■□□□□ 0.08
CDRT4Q8N9R6 MTRF1LP2-201ENST00000506027 1122 ntBASIC15.53■□□□□ 0.08
CDRT4Q8N9R6 NR2C2AP-204ENST00000538165 891 ntTSL 2 BASIC15.53■□□□□ 0.08
CDRT4Q8N9R6 AC145285.3-201ENST00000564603 959 ntBASIC15.53■□□□□ 0.08
CDRT4Q8N9R6 ANAPC11-210ENST00000574924 722 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
CDRT4Q8N9R6 DEF8-228ENST00000610455 816 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
CDRT4Q8N9R6 CLEC11A-203ENST00000617718 1128 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
CDRT4Q8N9R6 HOXA11-AS1_5.1-201ENST00000620211 203 ntBASIC15.53■□□□□ 0.08
CDRT4Q8N9R6 IQSEC2-210ENST00000639161 936 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
CDRT4Q8N9R6 C4orf50-202ENST00000531445 6860 ntAPPRIS P5 TSL 5 BASIC15.53■□□□□ 0.08
CDRT4Q8N9R6 PANK2-209ENST00000621507 1763 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
CDRT4Q8N9R6 SSPN-201ENST00000242729 2788 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
CDRT4Q8N9R6 LY6K-205ENST00000522591 2724 ntAPPRIS ALT2 TSL 2 BASIC15.53■□□□□ 0.08
CDRT4Q8N9R6 TMTC2-201ENST00000321196 5681 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
CDRT4Q8N9R6 RAN-212ENST00000543796 2661 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
CDRT4Q8N9R6 KDM5C-204ENST00000375401 6031 ntAPPRIS P3 TSL 1 (best) BASIC15.53■□□□□ 0.08
CDRT4Q8N9R6 CCDC183-201ENST00000338005 1671 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
CDRT4Q8N9R6 KRT35-202ENST00000393989 1670 ntAPPRIS P1 TSL 5 BASIC15.53■□□□□ 0.08
CDRT4Q8N9R6 HDAC8-206ENST00000373571 2133 ntTSL 5 BASIC15.53■□□□□ 0.08
CDRT4Q8N9R6 USHBP1-203ENST00000431146 2136 ntTSL 2 BASIC15.53■□□□□ 0.08
CDRT4Q8N9R6 DNAJA3-202ENST00000355296 2591 ntAPPRIS ALT1 TSL 1 (best) BASIC15.53■□□□□ 0.08
CDRT4Q8N9R6 AL512625.3-203ENST00000445604 1602 ntTSL 5 BASIC15.53■□□□□ 0.08
CDRT4Q8N9R6 SLC25A23-202ENST00000301454 3425 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
CDRT4Q8N9R6 ATP6V1C2-204ENST00000635370 1578 ntTSL 5 BASIC15.53■□□□□ 0.08
CDRT4Q8N9R6 ME2P1-201ENST00000426028 1970 ntBASIC15.53■□□□□ 0.08
CDRT4Q8N9R6 AC009292.1-201ENST00000502156 1986 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
CDRT4Q8N9R6 SMIM10-201ENST00000330288 1536 ntAPPRIS P1 BASIC15.53■□□□□ 0.08
CDRT4Q8N9R6 PCDHB19P-201ENST00000570871 2371 ntBASIC15.53■□□□□ 0.08
CDRT4Q8N9R6 FMNL1-201ENST00000328118 2330 ntTSL 2 BASIC15.52■□□□□ 0.08
CDRT4Q8N9R6 PHF1-202ENST00000374516 2330 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
CDRT4Q8N9R6 NEIL2-204ENST00000455213 2323 ntAPPRIS P1 TSL 5 BASIC15.52■□□□□ 0.08
CDRT4Q8N9R6 CRTC3-202ENST00000420329 5209 ntAPPRIS ALT1 TSL 2 BASIC15.52■□□□□ 0.08
CDRT4Q8N9R6 NAT9-210ENST00000580301 1860 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
CDRT4Q8N9R6 COQ7-201ENST00000321998 2657 ntAPPRIS P3 TSL 1 (best) BASIC15.52■□□□□ 0.08
CDRT4Q8N9R6 PCGF1-201ENST00000233630 1792 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
CDRT4Q8N9R6 CHAD-203ENST00000508540 1789 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
CDRT4Q8N9R6 HMGN1-204ENST00000380749 1383 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
Retrieved 100 of 98,524 protein–RNA pairs in 25.6 ms