Protein–RNA interactions for Protein: Q8IZC6

COL27A1, Collagen alpha-1(XXVII) chain, humanhuman

Predicted RBP Predictions only

Length 1,860 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL27A1Q8IZC6 TGIF2-C20orf24-201ENST00000558530 918 ntAPPRIS P1 TSL 3 BASIC15.49■□□□□ 0.07
COL27A1Q8IZC6 AC004477.1-202ENST00000584428 539 ntTSL 2 BASIC15.49■□□□□ 0.07
COL27A1Q8IZC6 AC020765.3-201ENST00000613051 740 ntBASIC15.49■□□□□ 0.07
COL27A1Q8IZC6 UBQLN4-201ENST00000368309 3576 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
COL27A1Q8IZC6 ZNF385A-202ENST00000352268 2076 ntTSL 2 BASIC15.49■□□□□ 0.07
COL27A1Q8IZC6 RDH13-223ENST00000610356 1931 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
COL27A1Q8IZC6 AGAP6-201ENST00000374056 2703 ntAPPRIS ALT2 TSL 1 (best) BASIC15.49■□□□□ 0.07
COL27A1Q8IZC6 FGFR4-203ENST00000393648 2733 ntAPPRIS ALT2 TSL 2 BASIC15.49■□□□□ 0.07
COL27A1Q8IZC6 COQ6-201ENST00000334571 2118 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
COL27A1Q8IZC6 CCDC183-201ENST00000338005 1671 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
COL27A1Q8IZC6 CORO6-210ENST00000580212 2345 ntTSL 5 BASIC15.49■□□□□ 0.07
COL27A1Q8IZC6 MBD1-207ENST00000398488 1512 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
COL27A1Q8IZC6 HAS3-205ENST00000569188 2170 ntAPPRIS P1 TSL 2 BASIC15.49■□□□□ 0.07
COL27A1Q8IZC6 IFFO1-204ENST00000396840 2677 ntAPPRIS ALT1 TSL 5 BASIC15.49■□□□□ 0.07
COL27A1Q8IZC6 CXCL6-201ENST00000226317 1718 ntAPPRIS P2 TSL 1 (best) BASIC15.49■□□□□ 0.07
COL27A1Q8IZC6 CPT2-208ENST00000636891 2746 ntTSL 5 BASIC15.49■□□□□ 0.07
COL27A1Q8IZC6 CPT2-210ENST00000637252 2739 ntTSL 5 BASIC15.49■□□□□ 0.07
COL27A1Q8IZC6 EPS8L2-205ENST00000526198 2289 ntAPPRIS ALT2 TSL 1 (best) BASIC15.48■□□□□ 0.07
COL27A1Q8IZC6 NDUFS8-201ENST00000313468 791 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
COL27A1Q8IZC6 RPLP2-201ENST00000321153 781 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
COL27A1Q8IZC6 STEAP3-204ENST00000409811 2103 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
COL27A1Q8IZC6 AC087499.6-201ENST00000411576 835 ntBASIC15.48■□□□□ 0.07
COL27A1Q8IZC6 AZGP1P1-201ENST00000411909 902 ntBASIC15.48■□□□□ 0.07
COL27A1Q8IZC6 RHOA-206ENST00000454011 889 ntTSL 2 BASIC15.48■□□□□ 0.07
COL27A1Q8IZC6 MPZL1-209ENST00000474859 630 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
COL27A1Q8IZC6 AC103957.2-201ENST00000521218 510 ntTSL 2 BASIC15.48■□□□□ 0.07
COL27A1Q8IZC6 AC233702.7-201ENST00000536958 924 ntTSL 5 BASIC15.48■□□□□ 0.07
COL27A1Q8IZC6 ATXN2-AS-201ENST00000547021 485 ntTSL 2 BASIC15.48■□□□□ 0.07
COL27A1Q8IZC6 AC105339.1-202ENST00000559535 1283 ntTSL 5 BASIC15.48■□□□□ 0.07
COL27A1Q8IZC6 NAA38-206ENST00000576384 424 ntTSL 2 BASIC15.48■□□□□ 0.07
COL27A1Q8IZC6 SMIM22-202ENST00000586440 549 ntAPPRIS P4 TSL 1 (best) BASIC15.48■□□□□ 0.07
COL27A1Q8IZC6 AC010319.3-201ENST00000597028 470 ntBASIC15.48■□□□□ 0.07
COL27A1Q8IZC6 SKOR2-202ENST00000425639 3899 ntAPPRIS ALT2 TSL 5 BASIC15.48■□□□□ 0.07
COL27A1Q8IZC6 NFIX-209ENST00000587760 1487 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
COL27A1Q8IZC6 TBC1D10A-203ENST00000403362 1833 ntAPPRIS ALT2 TSL 5 BASIC15.48■□□□□ 0.07
COL27A1Q8IZC6 CYB5R3-204ENST00000407332 1849 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
COL27A1Q8IZC6 ATP5S-201ENST00000245448 1671 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
COL27A1Q8IZC6 TGIF1-205ENST00000401449 1670 ntTSL 2 BASIC15.48■□□□□ 0.07
COL27A1Q8IZC6 ACTR3-208ENST00000535589 1530 ntTSL 2 BASIC15.48■□□□□ 0.07
COL27A1Q8IZC6 PON2-201ENST00000222572 1745 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
COL27A1Q8IZC6 RGS7-203ENST00000366564 2295 ntAPPRIS ALT2 TSL 1 (best) BASIC15.48■□□□□ 0.07
COL27A1Q8IZC6 GSDMD-206ENST00000526406 2496 ntAPPRIS P2 TSL 2 BASIC15.48■□□□□ 0.07
COL27A1Q8IZC6 CYP4F24P-201ENST00000586049 1580 ntBASIC15.48■□□□□ 0.07
COL27A1Q8IZC6 AL603756.1-201ENST00000606511 2163 ntBASIC15.48■□□□□ 0.07
COL27A1Q8IZC6 SCARF1-202ENST00000348987 2619 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
COL27A1Q8IZC6 SPAG7-201ENST00000206020 1058 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
COL27A1Q8IZC6 H1FOO-201ENST00000324382 1067 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
COL27A1Q8IZC6 PRAP1-201ENST00000433452 971 ntAPPRIS P3 TSL 1 (best) BASIC15.48■□□□□ 0.07
COL27A1Q8IZC6 Z94721.1-201ENST00000444102 385 ntTSL 5 BASIC15.48■□□□□ 0.07
COL27A1Q8IZC6 AC091729.1-201ENST00000449721 869 ntTSL 3 BASIC15.48■□□□□ 0.07
COL27A1Q8IZC6 AC084864.1-201ENST00000496217 305 ntTSL 3 BASIC15.48■□□□□ 0.07
COL27A1Q8IZC6 IL32-215ENST00000529550 772 ntAPPRIS P4 TSL 3 BASIC15.48■□□□□ 0.07
COL27A1Q8IZC6 RAB43P1-201ENST00000561790 589 ntBASIC15.48■□□□□ 0.07
COL27A1Q8IZC6 ORC6-206ENST00000568364 888 ntTSL 5 BASIC15.48■□□□□ 0.07
COL27A1Q8IZC6 IFNL3-202ENST00000613087 734 ntAPPRIS ALT2 TSL 1 (best) BASIC15.48■□□□□ 0.07
COL27A1Q8IZC6 PIMREG-201ENST00000250056 1473 ntAPPRIS ALT2 TSL 1 (best) BASIC15.48■□□□□ 0.07
COL27A1Q8IZC6 CLK3P2-201ENST00000427566 1453 ntBASIC15.48■□□□□ 0.07
COL27A1Q8IZC6 CD300LG-206ENST00000588884 1459 ntAPPRIS ALT2 TSL 2 BASIC15.48■□□□□ 0.07
COL27A1Q8IZC6 DOCK7-203ENST00000404627 2678 ntTSL 2 BASIC15.48■□□□□ 0.07
COL27A1Q8IZC6 INPP5J-213ENST00000620191 2306 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
COL27A1Q8IZC6 URAHP-202ENST00000409873 1349 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
COL27A1Q8IZC6 TMPRSS9-205ENST00000613480 2568 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
COL27A1Q8IZC6 RDH13-202ENST00000396247 1987 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
COL27A1Q8IZC6 NDRG2-204ENST00000360463 2047 ntAPPRIS ALT1 TSL 1 (best) BASIC15.47■□□□□ 0.07
COL27A1Q8IZC6 AL591845.1-201ENST00000373137 1838 ntTSL 2 BASIC15.47■□□□□ 0.07
COL27A1Q8IZC6 GNA11-201ENST00000078429 4147 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
COL27A1Q8IZC6 AC011474.1-201ENST00000582581 2582 ntTSL 2 BASIC15.47■□□□□ 0.07
COL27A1Q8IZC6 KCNMA1-283ENST00000640523 5425 ntAPPRIS ALT2 TSL 5 BASIC15.47■□□□□ 0.07
COL27A1Q8IZC6 TMEM64-203ENST00000458549 4997 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
COL27A1Q8IZC6 BUD31-201ENST00000222969 1035 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
COL27A1Q8IZC6 LCE5A-201ENST00000334269 819 ntAPPRIS P1 TSL 3 BASIC15.47■□□□□ 0.07
COL27A1Q8IZC6 BMP7-AS1-201ENST00000445956 436 ntTSL 2 BASIC15.47■□□□□ 0.07
COL27A1Q8IZC6 KRT223P-202ENST00000449164 1292 ntBASIC15.47■□□□□ 0.07
COL27A1Q8IZC6 NME2-206ENST00000513177 692 ntAPPRIS P1 TSL 2 BASIC15.47■□□□□ 0.07
COL27A1Q8IZC6 AP001005.4-201ENST00000572530 387 ntTSL 3 BASIC15.47■□□□□ 0.07
COL27A1Q8IZC6 MRNIP-225ENST00000610475 810 ntTSL 5 BASIC15.47■□□□□ 0.07
COL27A1Q8IZC6 TVP23C-201ENST00000225576 1527 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
COL27A1Q8IZC6 PNPO-201ENST00000225573 2256 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
COL27A1Q8IZC6 CABP7-201ENST00000216144 3259 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
COL27A1Q8IZC6 AJUBA-202ENST00000361265 2569 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
COL27A1Q8IZC6 ZCWPW1-202ENST00000398027 2356 ntAPPRIS P3 TSL 1 (best) BASIC15.47■□□□□ 0.07
COL27A1Q8IZC6 ZBTB11-202ENST00000461821 2115 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
COL27A1Q8IZC6 NOL4L-210ENST00000616976 1376 ntTSL 5 BASIC15.47■□□□□ 0.07
COL27A1Q8IZC6 TBX4-201ENST00000240335 2470 ntAPPRIS P3 TSL 1 (best) BASIC15.47■□□□□ 0.07
COL27A1Q8IZC6 ACSF2-201ENST00000300441 2235 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
COL27A1Q8IZC6 CR392000.2-201ENST00000640235 1994 ntTSL 2 BASIC15.47■□□□□ 0.07
COL27A1Q8IZC6 TRIM46-209ENST00000543729 1703 ntTSL 5 BASIC15.47■□□□□ 0.07
COL27A1Q8IZC6 RPH3A-203ENST00000543106 2581 ntAPPRIS ALT2 TSL 2 BASIC15.46■□□□□ 0.07
COL27A1Q8IZC6 MYCLP2-201ENST00000449268 967 ntBASIC15.46■□□□□ 0.07
COL27A1Q8IZC6 CHMP2B-205ENST00000494980 1175 ntTSL 3 BASIC15.46■□□□□ 0.07
COL27A1Q8IZC6 CNOT8-210ENST00000519404 945 ntTSL 2 BASIC15.46■□□□□ 0.07
COL27A1Q8IZC6 CNOT8-214ENST00000520671 923 ntTSL 2 BASIC15.46■□□□□ 0.07
COL27A1Q8IZC6 CNOT8-218ENST00000521583 1151 ntTSL 1 (best) BASIC15.46■□□□□ 0.07
COL27A1Q8IZC6 LINC01975-201ENST00000571890 549 ntTSL 4 BASIC15.46■□□□□ 0.07
COL27A1Q8IZC6 MIR4321-201ENST00000592276 80 ntBASIC15.46■□□□□ 0.07
COL27A1Q8IZC6 KLK3-204ENST00000593997 1035 ntTSL 1 (best) BASIC15.46■□□□□ 0.07
COL27A1Q8IZC6 AC093726.1-201ENST00000608064 963 ntBASIC15.46■□□□□ 0.07
COL27A1Q8IZC6 MALAT1-211ENST00000617791 394 ntTSL 5 BASIC15.46■□□□□ 0.07
COL27A1Q8IZC6 AANAT-201ENST00000250615 1913 ntTSL 1 (best) BASIC15.46■□□□□ 0.07
COL27A1Q8IZC6 PTGES3-201ENST00000262033 1920 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
Retrieved 100 of 98,524 protein–RNA pairs in 73.2 ms