Protein–RNA interactions for Protein: Q8IW19

APLF, Aprataxin and PNK-like factor, humanhuman

Predicted RBP Predictions only

Length 511 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APLFQ8IW19 AC021087.4-201ENST00000563761 564 ntBASIC16.69■□□□□ 0.26
APLFQ8IW19 SAP130-203ENST00000357702 4173 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
APLFQ8IW19 PPIL2-212ENST00000626352 2625 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
APLFQ8IW19 SLC44A1-203ENST00000374724 3088 ntAPPRIS ALT1 TSL 5 BASIC16.69■□□□□ 0.26
APLFQ8IW19 SYTL3-202ENST00000360448 2504 ntAPPRIS ALT1 TSL 5 BASIC16.69■□□□□ 0.26
APLFQ8IW19 ABCB10-201ENST00000344517 3857 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
APLFQ8IW19 INPP5K-201ENST00000320345 2880 ntTSL 5 BASIC16.69■□□□□ 0.26
APLFQ8IW19 MSI2-201ENST00000284073 6364 ntAPPRIS P4 TSL 1 (best) BASIC16.69■□□□□ 0.26
APLFQ8IW19 BAG5-202ENST00000337322 1960 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
APLFQ8IW19 ADARB2-203ENST00000381312 8421 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
APLFQ8IW19 CRAT-201ENST00000318080 2763 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
APLFQ8IW19 AC010931.2-202ENST00000514871 2566 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
APLFQ8IW19 RNF121-203ENST00000393713 2132 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
APLFQ8IW19 STKLD1-201ENST00000371957 2825 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
APLFQ8IW19 PTPN21-208ENST00000556564 6166 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
APLFQ8IW19 PDLIM7-202ENST00000355841 1689 ntAPPRIS P4 TSL 1 (best) BASIC16.69■□□□□ 0.26
APLFQ8IW19 HCRTR1-203ENST00000403528 2003 ntAPPRIS P1 TSL 5 BASIC16.69■□□□□ 0.26
APLFQ8IW19 FAM156B-207ENST00000616419 2032 ntAPPRIS P2 TSL 2 BASIC16.69■□□□□ 0.26
APLFQ8IW19 FAM156A-212ENST00000617970 2032 ntAPPRIS P2 TSL 2 BASIC16.69■□□□□ 0.26
APLFQ8IW19 RPS19-206ENST00000598742 2359 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
APLFQ8IW19 SLC6A8-201ENST00000253122 3763 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
APLFQ8IW19 CAP1-205ENST00000372802 2964 ntAPPRIS ALT1 TSL 5 BASIC16.68■□□□□ 0.26
APLFQ8IW19 CRAMP1-202ENST00000397412 7772 ntAPPRIS P1 TSL 5 BASIC16.68■□□□□ 0.26
APLFQ8IW19 APAF1-201ENST00000333991 4539 ntTSL 5 BASIC16.68■□□□□ 0.26
APLFQ8IW19 HNRNPA1-202ENST00000340913 1842 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
APLFQ8IW19 AC133561.2-201ENST00000380145 1802 ntTSL 2 BASIC16.68■□□□□ 0.26
APLFQ8IW19 DHRS7B-206ENST00000579303 1479 ntAPPRIS ALT1 TSL 5 BASIC16.68■□□□□ 0.26
APLFQ8IW19 WDR18-204ENST00000587001 1465 ntTSL 5 BASIC16.68■□□□□ 0.26
APLFQ8IW19 TLE3-212ENST00000558201 2766 ntTSL 5 BASIC16.68■□□□□ 0.26
APLFQ8IW19 GCGR-201ENST00000400723 2051 ntAPPRIS P2 TSL 1 (best) BASIC16.68■□□□□ 0.26
APLFQ8IW19 CACNA1G-202ENST00000354983 8138 ntAPPRIS ALT2 TSL 5 BASIC16.68■□□□□ 0.26
APLFQ8IW19 ZFAND5-204ENST00000376960 2686 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
APLFQ8IW19 RAPGEFL1-212ENST00000620260 3855 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
APLFQ8IW19 EWSR1-202ENST00000332035 1989 ntAPPRIS ALT2 TSL 2 BASIC16.68■□□□□ 0.26
APLFQ8IW19 TCTN1-229ENST00000614115 1965 ntTSL 5 BASIC16.68■□□□□ 0.26
APLFQ8IW19 EHHADH-203ENST00000456310 2577 ntTSL 2 BASIC16.68■□□□□ 0.26
APLFQ8IW19 CSF1-204ENST00000369802 2484 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
APLFQ8IW19 ISCA2-201ENST00000298818 851 ntTSL 5 BASIC16.68■□□□□ 0.26
APLFQ8IW19 GAR1-202ENST00000394631 1011 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
APLFQ8IW19 YWHAZ-204ENST00000395953 994 ntAPPRIS P1 TSL 5 BASIC16.68■□□□□ 0.26
APLFQ8IW19 TSNARE1-204ENST00000519651 2110 ntAPPRIS ALT2 TSL 1 (best) BASIC16.68■□□□□ 0.26
APLFQ8IW19 MTUS2-205ENST00000542829 1165 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
APLFQ8IW19 BLOC1S1-204ENST00000549147 1229 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
APLFQ8IW19 AL049869.3-201ENST00000554918 558 ntTSL 3 BASIC16.68■□□□□ 0.26
APLFQ8IW19 NUBP2-214ENST00000568706 913 ntTSL 2 BASIC16.68■□□□□ 0.26
APLFQ8IW19 ANAPC11-210ENST00000574924 722 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
APLFQ8IW19 IQSEC2-210ENST00000639161 936 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
APLFQ8IW19 LRRC57-202ENST00000397130 2384 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
APLFQ8IW19 AC126755.2-202ENST00000427999 1547 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
APLFQ8IW19 SYNGAP1-202ENST00000418600 5828 ntTSL 5 BASIC16.68■□□□□ 0.26
APLFQ8IW19 MCF2L2-201ENST00000328913 4980 ntAPPRIS P2 TSL 5 BASIC16.68■□□□□ 0.26
APLFQ8IW19 RHOBTB2-206ENST00000522948 4959 ntAPPRIS ALT2 TSL 5 BASIC16.68■□□□□ 0.26
APLFQ8IW19 ETFA-203ENST00000557943 2287 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
APLFQ8IW19 TGFBR2-202ENST00000359013 4605 ntAPPRIS ALT2 TSL 1 (best) BASIC16.68■□□□□ 0.26
APLFQ8IW19 KXD1-201ENST00000222307 1426 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
APLFQ8IW19 WDTC1-202ENST00000361771 4275 ntAPPRIS P3 TSL 1 (best) BASIC16.68■□□□□ 0.26
APLFQ8IW19 HOXA-AS3-205ENST00000524304 2063 ntTSL 2 BASIC16.68■□□□□ 0.26
APLFQ8IW19 KLK5-201ENST00000336334 1563 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
APLFQ8IW19 C8orf46-215ENST00000522977 1347 ntTSL 2 BASIC16.68■□□□□ 0.26
APLFQ8IW19 AC006019.1-201ENST00000425591 2470 ntTSL 2 BASIC16.68■□□□□ 0.26
APLFQ8IW19 MASTL-203ENST00000375946 3623 ntAPPRIS P3 TSL 1 (best) BASIC16.68■□□□□ 0.26
APLFQ8IW19 PITPNC1-203ENST00000580974 6182 ntAPPRIS ALT2 TSL 1 (best) BASIC16.68■□□□□ 0.26
APLFQ8IW19 KCNE3-201ENST00000310128 3143 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
APLFQ8IW19 RTEL1-TNFRSF6B-202ENST00000482936 4931 ntAPPRIS P5 TSL 2 BASIC16.67■□□□□ 0.26
APLFQ8IW19 MRI1-202ENST00000319545 3027 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
APLFQ8IW19 EXO5-202ENST00000358527 1892 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
APLFQ8IW19 FGFR3-208ENST00000481110 4217 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
APLFQ8IW19 SLC22A23-210ENST00000490273 2043 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
APLFQ8IW19 SYT15-201ENST00000374321 1369 ntAPPRIS P4 TSL 2 BASIC16.67■□□□□ 0.26
APLFQ8IW19 LENG8-209ENST00000616932 2825 ntAPPRIS ALT2 TSL 5 BASIC16.67■□□□□ 0.26
APLFQ8IW19 SH3BP2-207ENST00000503393 9158 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
APLFQ8IW19 NBEA-201ENST00000310336 10794 ntAPPRIS ALT1 TSL 1 (best) BASIC16.67■□□□□ 0.26
APLFQ8IW19 NBEA-208ENST00000629018 10791 ntAPPRIS ALT1 TSL 5 BASIC16.67■□□□□ 0.26
APLFQ8IW19 HTD2-201ENST00000461393 1508 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
APLFQ8IW19 GGT6-204ENST00000574154 2482 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
APLFQ8IW19 CTSG-201ENST00000216336 886 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
APLFQ8IW19 FUOM-202ENST00000368551 628 ntTSL 3 BASIC16.67■□□□□ 0.26
APLFQ8IW19 MSANTD3-201ENST00000374885 786 ntTSL 2 BASIC16.67■□□□□ 0.26
APLFQ8IW19 FAM220CP-201ENST00000395253 831 ntBASIC16.67■□□□□ 0.26
APLFQ8IW19 CTNS-203ENST00000399306 803 ntTSL 3 BASIC16.67■□□□□ 0.26
APLFQ8IW19 KRT18P65-201ENST00000439811 1286 ntBASIC16.67■□□□□ 0.26
APLFQ8IW19 KRT73-AS1-202ENST00000551089 563 ntTSL 4 BASIC16.67■□□□□ 0.26
APLFQ8IW19 LINC01956-202ENST00000584273 612 ntTSL 3 BASIC16.67■□□□□ 0.26
APLFQ8IW19 MED16-213ENST00000616387 1078 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
APLFQ8IW19 RAB34-226ENST00000636772 1180 ntTSL 5 BASIC16.67■□□□□ 0.26
APLFQ8IW19 ABCB6-201ENST00000265316 3016 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
APLFQ8IW19 Z99756.1-201ENST00000458463 1951 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
APLFQ8IW19 NBL1-213ENST00000622566 2109 ntAPPRIS P3 TSL 4 BASIC16.67■□□□□ 0.26
APLFQ8IW19 NTRK3-203ENST00000357724 2980 ntTSL 5 BASIC16.67■□□□□ 0.26
APLFQ8IW19 SEPT11-209ENST00000510515 1886 ntTSL 2 BASIC16.67■□□□□ 0.26
APLFQ8IW19 B3GNT3-202ENST00000595387 1349 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
APLFQ8IW19 PRRT2-216ENST00000637403 2033 ntTSL 5 BASIC16.67■□□□□ 0.26
APLFQ8IW19 SP7-203ENST00000537210 1472 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
APLFQ8IW19 RAP2C-201ENST00000342983 3896 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
APLFQ8IW19 CES3-203ENST00000543856 3178 ntTSL 2 BASIC16.67■□□□□ 0.26
APLFQ8IW19 HLA-J-201ENST00000462773 1622 ntBASIC16.67■□□□□ 0.26
APLFQ8IW19 CGB7-202ENST00000596965 1949 ntAPPRIS P1 TSL 2 BASIC16.66■□□□□ 0.26
APLFQ8IW19 SLC12A5-201ENST00000243964 6061 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
APLFQ8IW19 AIFM2-201ENST00000307864 3243 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
APLFQ8IW19 STK24-203ENST00000397517 4578 ntTSL 2 BASIC16.66■□□□□ 0.26
Retrieved 100 of 98,524 protein–RNA pairs in 50.3 ms