Protein–RNA interactions for Protein: Q86Y39

NDUFA11, NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 11, humanhuman

Predictions only

Length 141 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NDUFA11Q86Y39 MFSD2A-202ENST00000372811 2154 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
NDUFA11Q86Y39 HASPIN-201ENST00000325418 2797 ntAPPRIS P1 BASIC12.98□□□□□ -0.33
NDUFA11Q86Y39 GATB-209ENST00000512306 1519 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
NDUFA11Q86Y39 LINC00094-205ENST00000603928 5722 ntAPPRIS ALT2 TSL 2 BASIC12.98□□□□□ -0.33
NDUFA11Q86Y39 PLEKHG4-205ENST00000450733 4480 ntAPPRIS ALT2 TSL 1 (best) BASIC12.98□□□□□ -0.33
NDUFA11Q86Y39 PYCR3-201ENST00000220966 2678 ntAPPRIS P2 TSL 1 (best) BASIC12.98□□□□□ -0.33
NDUFA11Q86Y39 ARSA-201ENST00000216124 2050 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
NDUFA11Q86Y39 KLK3-201ENST00000326003 1463 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
NDUFA11Q86Y39 FOS-208ENST00000555686 1496 ntTSL 2 BASIC12.98□□□□□ -0.33
NDUFA11Q86Y39 CCNI2-204ENST00000614847 2642 ntAPPRIS ALT2 TSL 1 (best) BASIC12.98□□□□□ -0.33
NDUFA11Q86Y39 SLC44A3-207ENST00000529450 2045 ntTSL 2 BASIC12.98□□□□□ -0.33
NDUFA11Q86Y39 HYAL3-205ENST00000450982 1402 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
NDUFA11Q86Y39 ZBTB10-202ENST00000426744 9878 ntAPPRIS ALT2 TSL 5 BASIC12.98□□□□□ -0.33
NDUFA11Q86Y39 FTCDNL1-204ENST00000622774 1997 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
NDUFA11Q86Y39 DIP2A-204ENST00000457905 3044 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
NDUFA11Q86Y39 CLDN7-203ENST00000538261 1923 ntTSL 5 BASIC12.98□□□□□ -0.33
NDUFA11Q86Y39 DUOXA1-202ENST00000430224 1317 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
NDUFA11Q86Y39 MAGI3-203ENST00000369615 6508 ntAPPRIS P1 TSL 5 BASIC12.98□□□□□ -0.33
NDUFA11Q86Y39 RDH12-201ENST00000267502 1833 ntAPPRIS P1 TSL 5 BASIC12.98□□□□□ -0.33
NDUFA11Q86Y39 GRAMD1B-214ENST00000635736 2814 ntAPPRIS P1 TSL 5 BASIC12.98□□□□□ -0.33
NDUFA11Q86Y39 CABP2-201ENST00000294288 925 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
NDUFA11Q86Y39 SPEM1-201ENST00000323675 982 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
NDUFA11Q86Y39 OSTC-201ENST00000361564 1077 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
NDUFA11Q86Y39 ITGA9-AS1-201ENST00000366441 895 ntTSL 3 BASIC12.98□□□□□ -0.33
NDUFA11Q86Y39 MRPL9-202ENST00000368830 1296 ntAPPRIS P3 TSL 1 (best) BASIC12.98□□□□□ -0.33
NDUFA11Q86Y39 C6orf52-202ENST00000379586 430 ntAPPRIS ALT2 TSL 2 BASIC12.98□□□□□ -0.33
NDUFA11Q86Y39 CXCL1-201ENST00000395761 1097 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
NDUFA11Q86Y39 PRRT3-AS1-201ENST00000431558 614 ntTSL 2 BASIC12.98□□□□□ -0.33
NDUFA11Q86Y39 AL732437.1-201ENST00000442008 595 ntTSL 4 BASIC12.98□□□□□ -0.33
NDUFA11Q86Y39 PRICKLE2-AS1-203ENST00000476308 623 ntTSL 2 BASIC12.98□□□□□ -0.33
NDUFA11Q86Y39 PTHLH-207ENST00000539239 890 ntAPPRIS ALT1 TSL 5 BASIC12.98□□□□□ -0.33
NDUFA11Q86Y39 AC090607.3-202ENST00000558971 383 ntTSL 3 BASIC12.98□□□□□ -0.33
NDUFA11Q86Y39 AC026150.2-201ENST00000564693 1156 ntBASIC12.98□□□□□ -0.33
NDUFA11Q86Y39 TMEM88-202ENST00000574668 510 ntTSL 2 BASIC12.98□□□□□ -0.33
NDUFA11Q86Y39 AC011491.2-201ENST00000599584 447 ntTSL 5 BASIC12.98□□□□□ -0.33
NDUFA11Q86Y39 CKMT1B-215ENST00000627381 1074 ntTSL 5 BASIC12.98□□□□□ -0.33
NDUFA11Q86Y39 CLN3-246ENST00000636228 1224 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
NDUFA11Q86Y39 PIGZ-202ENST00000412723 2701 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
NDUFA11Q86Y39 DCAF17-211ENST00000539783 5623 ntAPPRIS ALT2 TSL 5 BASIC12.98□□□□□ -0.33
NDUFA11Q86Y39 RANBP9-201ENST00000011619 3113 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
NDUFA11Q86Y39 GPAT3-202ENST00000395226 2631 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
NDUFA11Q86Y39 ADIRF-AS1-201ENST00000418273 2627 ntTSL 3 BASIC12.98□□□□□ -0.33
NDUFA11Q86Y39 PARD3-201ENST00000340077 3518 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
NDUFA11Q86Y39 C1orf56-201ENST00000368926 2096 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
NDUFA11Q86Y39 NAA50-201ENST00000240922 6135 ntAPPRIS P3 TSL 1 (best) BASIC12.98□□□□□ -0.33
NDUFA11Q86Y39 CD72-204ENST00000396757 2035 ntAPPRIS P2 TSL 5 BASIC12.98□□□□□ -0.33
NDUFA11Q86Y39 CORO1C-204ENST00000541050 2487 ntAPPRIS P1 TSL 2 BASIC12.98□□□□□ -0.33
NDUFA11Q86Y39 GATA6-201ENST00000269216 3770 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
NDUFA11Q86Y39 AL109955.1-201ENST00000417346 1540 ntTSL 2 BASIC12.98□□□□□ -0.33
NDUFA11Q86Y39 DMKN-201ENST00000339686 1927 ntAPPRIS P3 TSL 1 (best) BASIC12.98□□□□□ -0.33
NDUFA11Q86Y39 RBM17-201ENST00000379888 2755 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
NDUFA11Q86Y39 JKAMP-215ENST00000616435 2338 ntTSL 5 BASIC12.97□□□□□ -0.33
NDUFA11Q86Y39 MCF2L-203ENST00000375604 6445 ntAPPRIS P3 TSL 2 BASIC12.97□□□□□ -0.33
NDUFA11Q86Y39 DVL2-209ENST00000575458 2659 ntAPPRIS ALT2 TSL 2 BASIC12.97□□□□□ -0.33
NDUFA11Q86Y39 CASZ1-202ENST00000377022 7936 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
NDUFA11Q86Y39 AC134043.2-201ENST00000624206 2238 ntBASIC12.97□□□□□ -0.33
NDUFA11Q86Y39 CAPN1-201ENST00000279247 3007 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
NDUFA11Q86Y39 ADAMTS16-201ENST00000274181 4979 ntAPPRIS P1 TSL 2 BASIC12.97□□□□□ -0.33
NDUFA11Q86Y39 ZNF416-201ENST00000196489 2561 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
NDUFA11Q86Y39 MFF-202ENST00000337110 1760 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
NDUFA11Q86Y39 LDOC1-201ENST00000370526 1381 ntAPPRIS P1 BASIC12.97□□□□□ -0.33
NDUFA11Q86Y39 SCLT1-204ENST00000503215 1364 ntAPPRIS ALT2 TSL 1 (best) BASIC12.97□□□□□ -0.33
NDUFA11Q86Y39 CLCN2-204ENST00000434054 2897 ntAPPRIS ALT2 TSL 2 BASIC12.97□□□□□ -0.33
NDUFA11Q86Y39 AXIN1-201ENST00000262320 3643 ntAPPRIS P4 TSL 1 (best) BASIC12.97□□□□□ -0.33
NDUFA11Q86Y39 AL162586.1-201ENST00000439298 2055 ntTSL 2 BASIC12.97□□□□□ -0.33
NDUFA11Q86Y39 COL8A2-202ENST00000397799 4670 ntAPPRIS P1 TSL 5 BASIC12.97□□□□□ -0.33
NDUFA11Q86Y39 CHEK1-202ENST00000427383 1670 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
NDUFA11Q86Y39 TNFAIP1-202ENST00000544907 1656 ntTSL 2 BASIC12.97□□□□□ -0.33
NDUFA11Q86Y39 SLC22A18AS-203ENST00000625099 1659 ntAPPRIS ALT2 TSL 1 (best) BASIC12.97□□□□□ -0.33
NDUFA11Q86Y39 GOLGA2P9-203ENST00000600260 2033 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
NDUFA11Q86Y39 RNF103-201ENST00000237455 3477 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
NDUFA11Q86Y39 CABP5-201ENST00000293255 1257 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
NDUFA11Q86Y39 SFT2D1-201ENST00000361731 1079 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
NDUFA11Q86Y39 HDAC8-202ENST00000373556 704 ntTSL 2 BASIC12.97□□□□□ -0.33
NDUFA11Q86Y39 NQO2-203ENST00000380441 1021 ntTSL 5 BASIC12.97□□□□□ -0.33
NDUFA11Q86Y39 CEP19-201ENST00000399942 1172 ntAPPRIS ALT2 TSL 5 BASIC12.97□□□□□ -0.33
NDUFA11Q86Y39 ZDHHC20-IT1-201ENST00000417513 440 ntTSL 3 BASIC12.97□□□□□ -0.33
NDUFA11Q86Y39 CDK2AP2P3-201ENST00000422476 372 ntBASIC12.97□□□□□ -0.33
NDUFA11Q86Y39 AC026202.2-201ENST00000439325 672 ntTSL 2 BASIC12.97□□□□□ -0.33
NDUFA11Q86Y39 SSNA1-204ENST00000464553 723 ntTSL 2 BASIC12.97□□□□□ -0.33
NDUFA11Q86Y39 TSC22D3-213ENST00000506081 956 ntTSL 5 BASIC12.97□□□□□ -0.33
NDUFA11Q86Y39 SMCO4-204ENST00000527149 472 ntAPPRIS P1 TSL 5 BASIC12.97□□□□□ -0.33
NDUFA11Q86Y39 ZNF667-AS1-204ENST00000588158 921 ntTSL 3 BASIC12.97□□□□□ -0.33
NDUFA11Q86Y39 PTPRS-208ENST00000590509 893 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
NDUFA11Q86Y39 SNHG8-201ENST00000602414 672 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
NDUFA11Q86Y39 SNHG8-205ENST00000602819 470 ntTSL 2 BASIC12.97□□□□□ -0.33
NDUFA11Q86Y39 AL390955.2-201ENST00000603032 514 ntBASIC12.97□□□□□ -0.33
NDUFA11Q86Y39 SBK3-202ENST00000612221 1270 ntAPPRIS P1 TSL 5 BASIC12.97□□□□□ -0.33
NDUFA11Q86Y39 CBR3-AS1-216ENST00000624883 564 ntTSL 3 BASIC12.97□□□□□ -0.33
NDUFA11Q86Y39 AL359644.1-202ENST00000637541 571 ntTSL 3 BASIC12.97□□□□□ -0.33
NDUFA11Q86Y39 TMEM132E-201ENST00000321639 5631 ntAPPRIS ALT2 TSL 5 BASIC12.97□□□□□ -0.33
NDUFA11Q86Y39 GUCD1-203ENST00000404664 1606 ntTSL 2 BASIC12.97□□□□□ -0.33
NDUFA11Q86Y39 GABARAPL1-201ENST00000266458 1957 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
NDUFA11Q86Y39 TMEM143-202ENST00000377431 1960 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
NDUFA11Q86Y39 TJP1-212ENST00000614355 6977 ntAPPRIS ALT2 TSL 5 BASIC12.97□□□□□ -0.33
NDUFA11Q86Y39 ADAMTS16-203ENST00000511368 2682 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
NDUFA11Q86Y39 GABRB3-202ENST00000311550 5781 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
NDUFA11Q86Y39 KDM6A-202ENST00000382899 5789 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
NDUFA11Q86Y39 CBX6-202ENST00000407418 6122 ntAPPRIS P3 TSL 1 (best) BASIC12.97□□□□□ -0.33
NDUFA11Q86Y39 FAM135A-205ENST00000418814 6415 ntTSL 5 BASIC12.97□□□□□ -0.33
Retrieved 100 of 98,524 protein–RNA pairs in 29.5 ms