Protein–RNA interactions for Protein: Q6IQ49

SDE2, Protein SDE2 homolog, humanhuman

Predictions only

Length 451 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SDE2Q6IQ49 ASB13-201ENST00000357700 2699 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
SDE2Q6IQ49 CACNA1G-201ENST00000352832 7848 ntAPPRIS ALT2 TSL 1 (best) BASIC16.95■□□□□ 0.3
SDE2Q6IQ49 PCNX2-201ENST00000258229 7518 ntAPPRIS P2 TSL 5 BASIC16.95■□□□□ 0.3
SDE2Q6IQ49 ST6GALNAC6-201ENST00000291839 2280 ntAPPRIS P3 TSL 1 (best) BASIC16.95■□□□□ 0.3
SDE2Q6IQ49 PPM1M-202ENST00000323588 2193 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
SDE2Q6IQ49 PRX-202ENST00000324001 4855 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
SDE2Q6IQ49 ELF2-207ENST00000510408 1965 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
SDE2Q6IQ49 SNHG18-201ENST00000508179 1799 ntTSL 2 BASIC16.95■□□□□ 0.3
SDE2Q6IQ49 OVOL1-203ENST00000532448 1774 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
SDE2Q6IQ49 AC016027.1-202ENST00000607927 1699 ntBASIC16.95■□□□□ 0.3
SDE2Q6IQ49 AC118553.2-202ENST00000638792 2729 ntAPPRIS ALT2 TSL 5 BASIC16.95■□□□□ 0.3
SDE2Q6IQ49 HOXB3-205ENST00000470495 4208 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
SDE2Q6IQ49 SLCO6A1-202ENST00000389019 2340 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
SDE2Q6IQ49 AC134043.2-201ENST00000624206 2238 ntBASIC16.95■□□□□ 0.3
SDE2Q6IQ49 LSM1-201ENST00000311351 1147 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
SDE2Q6IQ49 TMEM270-201ENST00000320531 854 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
SDE2Q6IQ49 LINC00313-201ENST00000332440 579 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
SDE2Q6IQ49 ERAS-201ENST00000338270 1266 ntAPPRIS P1 BASIC16.95■□□□□ 0.3
SDE2Q6IQ49 U52111.1-201ENST00000434284 914 ntTSL 3 BASIC16.95■□□□□ 0.3
SDE2Q6IQ49 MSLNL-201ENST00000442466 2109 ntAPPRIS P1 TSL 5 BASIC16.95■□□□□ 0.3
SDE2Q6IQ49 COX20P2-201ENST00000452636 358 ntBASIC16.95■□□□□ 0.3
SDE2Q6IQ49 KRT18P34-201ENST00000488218 1270 ntBASIC16.95■□□□□ 0.3
SDE2Q6IQ49 RNF24-204ENST00000545616 1128 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
SDE2Q6IQ49 AP000842.3-202ENST00000569238 1080 ntBASIC16.95■□□□□ 0.3
SDE2Q6IQ49 AC141424.1-203ENST00000599026 887 ntTSL 5 BASIC16.95■□□□□ 0.3
SDE2Q6IQ49 AC011491.2-201ENST00000599584 447 ntTSL 5 BASIC16.95■□□□□ 0.3
SDE2Q6IQ49 RAB34-224ENST00000636513 888 ntTSL 5 BASIC16.95■□□□□ 0.3
SDE2Q6IQ49 STK24-203ENST00000397517 4578 ntTSL 2 BASIC16.95■□□□□ 0.3
SDE2Q6IQ49 MAST3-201ENST00000262811 5896 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
SDE2Q6IQ49 TNRC18P3-201ENST00000441896 2691 ntBASIC16.95■□□□□ 0.3
SDE2Q6IQ49 KLC2-203ENST00000394066 2591 ntTSL 2 BASIC16.95■□□□□ 0.3
SDE2Q6IQ49 PLK3-201ENST00000372201 2492 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
SDE2Q6IQ49 CCM2-207ENST00000475551 2471 ntAPPRIS ALT2 TSL 2 BASIC16.95■□□□□ 0.3
SDE2Q6IQ49 GTF2H4-201ENST00000259895 1735 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
SDE2Q6IQ49 HLA-DQB1-204ENST00000399084 1734 ntAPPRIS P1 BASIC16.95■□□□□ 0.3
SDE2Q6IQ49 GATA6-201ENST00000269216 3770 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
SDE2Q6IQ49 TJP3-205ENST00000587686 2946 ntAPPRIS ALT2 TSL 1 (best) BASIC16.95■□□□□ 0.3
SDE2Q6IQ49 TSC2-204ENST00000401874 5421 ntAPPRIS ALT2 TSL 1 (best) BASIC16.95■□□□□ 0.3
SDE2Q6IQ49 PPM1D-201ENST00000305921 4778 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
SDE2Q6IQ49 EDC3-202ENST00000426797 2093 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
SDE2Q6IQ49 KDM4B-203ENST00000536461 5027 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
SDE2Q6IQ49 SRF-201ENST00000265354 4202 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
SDE2Q6IQ49 AHRR-201ENST00000316418 5661 ntAPPRIS P3 TSL 1 (best) BASIC16.94■□□□□ 0.3
SDE2Q6IQ49 FOXE1-201ENST00000375123 3462 ntAPPRIS P1 BASIC16.94■□□□□ 0.3
SDE2Q6IQ49 ADARB1-202ENST00000360697 6604 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
SDE2Q6IQ49 CHCHD3-201ENST00000262570 1598 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
SDE2Q6IQ49 AC008677.1-201ENST00000519230 1561 ntBASIC16.94■□□□□ 0.3
SDE2Q6IQ49 TFEB-201ENST00000230323 2354 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
SDE2Q6IQ49 CCNI2-201ENST00000378731 2355 ntAPPRIS P3 TSL 1 (best) BASIC16.94■□□□□ 0.3
SDE2Q6IQ49 HPS3-202ENST00000460120 2745 ntTSL 2 BASIC16.94■□□□□ 0.3
SDE2Q6IQ49 PFN2-201ENST00000239940 2261 ntAPPRIS P3 TSL 1 (best) BASIC16.94■□□□□ 0.3
SDE2Q6IQ49 P2RX6-201ENST00000401443 1834 ntAPPRIS ALT2 TSL 1 (best) BASIC16.94■□□□□ 0.3
SDE2Q6IQ49 CLEC17A-202ENST00000417570 1399 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
SDE2Q6IQ49 TLL1-204ENST00000507499 4818 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
SDE2Q6IQ49 VCX-202ENST00000381059 967 ntAPPRIS P2 TSL 1 (best) BASIC16.94■□□□□ 0.3
SDE2Q6IQ49 SUMO1-201ENST00000392244 831 ntTSL 2 BASIC16.94■□□□□ 0.3
SDE2Q6IQ49 CENPM-205ENST00000404067 905 ntTSL 3 BASIC16.94■□□□□ 0.3
SDE2Q6IQ49 AL035633.1-201ENST00000406139 838 ntBASIC16.94■□□□□ 0.3
SDE2Q6IQ49 SUMO1-209ENST00000409712 761 ntTSL 2 BASIC16.94■□□□□ 0.3
SDE2Q6IQ49 LINC00398-201ENST00000414407 906 ntTSL 2 BASIC16.94■□□□□ 0.3
SDE2Q6IQ49 ZDHHC20-IT1-201ENST00000417513 440 ntTSL 3 BASIC16.94■□□□□ 0.3
SDE2Q6IQ49 SPDYE14P-201ENST00000442619 822 ntBASIC16.94■□□□□ 0.3
SDE2Q6IQ49 PRICKLE2-AS1-203ENST00000476308 623 ntTSL 2 BASIC16.94■□□□□ 0.3
SDE2Q6IQ49 RNASEK-203ENST00000549393 783 ntTSL 3 BASIC16.94■□□□□ 0.3
SDE2Q6IQ49 AC004846.2-201ENST00000556578 777 ntTSL 3 BASIC16.94■□□□□ 0.3
SDE2Q6IQ49 CDC42EP4-209ENST00000630622 240 ntTSL 5 BASIC16.94■□□□□ 0.3
SDE2Q6IQ49 RBBP7-203ENST00000380087 2333 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
SDE2Q6IQ49 PRDM8-203ENST00000504452 3706 ntAPPRIS P1 TSL 5 BASIC16.94■□□□□ 0.3
SDE2Q6IQ49 RPS5-202ENST00000596046 1520 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
SDE2Q6IQ49 TBL2-201ENST00000305632 3161 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
SDE2Q6IQ49 TSC2-222ENST00000568454 5434 ntAPPRIS ALT2 TSL 2 BASIC16.94■□□□□ 0.3
SDE2Q6IQ49 FAM222A-201ENST00000358906 2731 ntAPPRIS P1 TSL 5 BASIC16.94■□□□□ 0.3
SDE2Q6IQ49 KCNMA1-201ENST00000286627 6194 ntAPPRIS P3 TSL 1 (best) BASIC16.94■□□□□ 0.3
SDE2Q6IQ49 CCDC120-206ENST00000603986 2379 ntAPPRIS ALT2 TSL 2 BASIC16.94■□□□□ 0.3
SDE2Q6IQ49 CCDC92-201ENST00000238156 2787 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
SDE2Q6IQ49 NFKB2-201ENST00000189444 3011 ntAPPRIS ALT1 TSL 1 (best) BASIC16.94■□□□□ 0.3
SDE2Q6IQ49 GUCY1A2-201ENST00000282249 3047 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
SDE2Q6IQ49 FAM213B-202ENST00000378425 2665 ntAPPRIS ALT2 TSL 2 BASIC16.93■□□□□ 0.3
SDE2Q6IQ49 RNPS1-202ENST00000320225 2241 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
SDE2Q6IQ49 NOL4-211ENST00000589544 2221 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
SDE2Q6IQ49 SLC30A1-201ENST00000367001 5474 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
SDE2Q6IQ49 ALMS1P1-202ENST00000450720 1601 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
SDE2Q6IQ49 ZNF853-201ENST00000457543 3857 ntAPPRIS P1 TSL 3 BASIC16.93■□□□□ 0.3
SDE2Q6IQ49 SRP19-201ENST00000282999 937 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
SDE2Q6IQ49 ZNF524-201ENST00000301073 1102 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
SDE2Q6IQ49 IFT20-202ENST00000357896 974 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
SDE2Q6IQ49 MIR346-201ENST00000362234 95 ntBASIC16.93■□□□□ 0.3
SDE2Q6IQ49 TNNT3-204ENST00000381558 1258 ntAPPRIS ALT2 TSL 5 BASIC16.93■□□□□ 0.3
SDE2Q6IQ49 AL022316.1-201ENST00000428765 572 ntTSL 4 BASIC16.93■□□□□ 0.3
SDE2Q6IQ49 PLAC9P1-202ENST00000433290 400 ntTSL 2 BASIC16.93■□□□□ 0.3
SDE2Q6IQ49 SLC50A1-209ENST00000484157 886 ntTSL 3 BASIC16.93■□□□□ 0.3
SDE2Q6IQ49 UCHL1-204ENST00000503431 917 ntAPPRIS P1 TSL 3 BASIC16.93■□□□□ 0.3
SDE2Q6IQ49 FBXO4-206ENST00000509134 1284 ntTSL 5 BASIC16.93■□□□□ 0.3
SDE2Q6IQ49 AC069120.2-201ENST00000524091 540 ntBASIC16.93■□□□□ 0.3
SDE2Q6IQ49 GATD1-206ENST00000526325 756 ntTSL 5 BASIC16.93■□□□□ 0.3
SDE2Q6IQ49 FLYWCH2-203ENST00000572006 754 ntAPPRIS ALT2 TSL 2 BASIC16.93■□□□□ 0.3
SDE2Q6IQ49 AC138761.1-201ENST00000584393 385 ntBASIC16.93■□□□□ 0.3
SDE2Q6IQ49 PTPRS-208ENST00000590509 893 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
SDE2Q6IQ49 AL390955.2-201ENST00000603032 514 ntBASIC16.93■□□□□ 0.3
SDE2Q6IQ49 PRSS35-201ENST00000369700 2440 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Retrieved 100 of 98,524 protein–RNA pairs in 33 ms