Protein–RNA interactions for Protein: Q6DN03

HIST2H2BC, Putative histone H2B type 2-C, humanhuman

Predictions only

Length 193 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HIST2H2BCQ6DN03 KCNK7-201ENST00000340313 1298 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
HIST2H2BCQ6DN03 TPD52L1-202ENST00000368388 2147 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
HIST2H2BCQ6DN03 WDR53-204ENST00000433160 887 ntTSL 5 BASIC14.16□□□□□ -0.14
HIST2H2BCQ6DN03 AL136361.1-201ENST00000435429 506 ntTSL 3 BASIC14.16□□□□□ -0.14
HIST2H2BCQ6DN03 LINC01088-201ENST00000437737 973 ntTSL 5 BASIC14.16□□□□□ -0.14
HIST2H2BCQ6DN03 AC106786.1-201ENST00000442777 792 ntTSL 3 BASIC14.16□□□□□ -0.14
HIST2H2BCQ6DN03 AC098859.1-201ENST00000502915 1238 ntBASIC14.16□□□□□ -0.14
HIST2H2BCQ6DN03 AC008011.2-201ENST00000538113 792 ntTSL 3 BASIC14.16□□□□□ -0.14
HIST2H2BCQ6DN03 NPBWR2-201ENST00000369768 1352 ntAPPRIS P1 BASIC14.16□□□□□ -0.14
HIST2H2BCQ6DN03 AP003392.4-202ENST00000526453 1359 ntTSL 2 BASIC14.16□□□□□ -0.14
HIST2H2BCQ6DN03 C18orf25-204ENST00000615553 2329 ntTSL 5 BASIC14.16□□□□□ -0.14
HIST2H2BCQ6DN03 CRYM-201ENST00000219599 1471 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
HIST2H2BCQ6DN03 KRT8P19-201ENST00000551916 1455 ntBASIC14.16□□□□□ -0.14
HIST2H2BCQ6DN03 PDLIM7-203ENST00000359895 1567 ntAPPRIS ALT2 TSL 1 (best) BASIC14.16□□□□□ -0.14
HIST2H2BCQ6DN03 CDH22-201ENST00000372262 3661 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
HIST2H2BCQ6DN03 HCN4-201ENST00000261917 7228 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
HIST2H2BCQ6DN03 SCYL1-202ENST00000279270 1659 ntTSL 5 BASIC14.16□□□□□ -0.14
HIST2H2BCQ6DN03 MARCH2-208ENST00000602117 1667 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
HIST2H2BCQ6DN03 TRIM63-201ENST00000374272 1770 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
HIST2H2BCQ6DN03 COL13A1-201ENST00000354547 3027 ntAPPRIS ALT2 TSL 5 BASIC14.16□□□□□ -0.14
HIST2H2BCQ6DN03 CDO1-201ENST00000250535 1860 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
HIST2H2BCQ6DN03 KDELC1-201ENST00000376004 2060 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
HIST2H2BCQ6DN03 SLC6A9-201ENST00000357730 2168 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
HIST2H2BCQ6DN03 TMEM8B-204ENST00000439587 2150 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
HIST2H2BCQ6DN03 AC116562.4-201ENST00000641316 2276 ntBASIC14.16□□□□□ -0.14
HIST2H2BCQ6DN03 LTBP3-202ENST00000322147 4046 ntAPPRIS P3 TSL 1 (best) BASIC14.16□□□□□ -0.14
HIST2H2BCQ6DN03 BMP1-202ENST00000306385 4229 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
HIST2H2BCQ6DN03 PON1-201ENST00000222381 2568 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
HIST2H2BCQ6DN03 HIC1-202ENST00000399849 3156 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
HIST2H2BCQ6DN03 KCNH2-202ENST00000330883 3267 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
HIST2H2BCQ6DN03 PRRG2-201ENST00000246794 1404 ntAPPRIS P1 TSL 2 BASIC14.15□□□□□ -0.14
HIST2H2BCQ6DN03 CLDN7-201ENST00000360325 1542 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
HIST2H2BCQ6DN03 CROCCP3-202ENST00000420820 1947 ntBASIC14.15□□□□□ -0.14
HIST2H2BCQ6DN03 SLC38A10-201ENST00000288439 2708 ntAPPRIS P3 TSL 1 (best) BASIC14.15□□□□□ -0.14
HIST2H2BCQ6DN03 P3H4-201ENST00000355468 2791 ntAPPRIS P2 TSL 2 BASIC14.15□□□□□ -0.14
HIST2H2BCQ6DN03 MZF1-203ENST00000594234 2385 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
HIST2H2BCQ6DN03 PITPNM2-AS1-201ENST00000506255 2191 ntTSL 2 BASIC14.15□□□□□ -0.14
HIST2H2BCQ6DN03 C17orf100-201ENST00000542475 1756 ntAPPRIS P1 BASIC14.15□□□□□ -0.14
HIST2H2BCQ6DN03 SMAD4-201ENST00000342988 8769 ntAPPRIS P1 TSL 5 BASIC14.15□□□□□ -0.14
HIST2H2BCQ6DN03 TFRC-202ENST00000392396 5032 ntAPPRIS P3 TSL 1 (best) BASIC14.15□□□□□ -0.14
HIST2H2BCQ6DN03 ZCCHC17-205ENST00000615916 1652 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
HIST2H2BCQ6DN03 ZNF890P-201ENST00000422060 1352 ntTSL 2 BASIC14.15□□□□□ -0.14
HIST2H2BCQ6DN03 KRTAP19-7-201ENST00000334849 440 ntAPPRIS P1 BASIC14.15□□□□□ -0.14
HIST2H2BCQ6DN03 MRPL55-215ENST00000366742 630 ntAPPRIS P1 TSL 2 BASIC14.15□□□□□ -0.14
HIST2H2BCQ6DN03 RNF183-202ENST00000416588 849 ntAPPRIS P1 TSL 3 BASIC14.15□□□□□ -0.14
HIST2H2BCQ6DN03 AL157392.3-216ENST00000437446 462 ntTSL 3 BASIC14.15□□□□□ -0.14
HIST2H2BCQ6DN03 AC129492.3-201ENST00000498285 460 ntAPPRIS P1 TSL 4 BASIC14.15□□□□□ -0.14
HIST2H2BCQ6DN03 ACRV1-202ENST00000527795 782 ntAPPRIS ALT2 TSL 2 BASIC14.15□□□□□ -0.14
HIST2H2BCQ6DN03 AC009163.1-201ENST00000530512 573 ntTSL 4 BASIC14.15□□□□□ -0.14
HIST2H2BCQ6DN03 AC087612.1-201ENST00000560238 658 ntTSL 5 BASIC14.15□□□□□ -0.14
HIST2H2BCQ6DN03 AC009133.1-202ENST00000563806 494 ntTSL 3 BASIC14.15□□□□□ -0.14
HIST2H2BCQ6DN03 NAA38-207ENST00000576861 556 ntTSL 3 BASIC14.15□□□□□ -0.14
HIST2H2BCQ6DN03 AC022903.1-201ENST00000579327 469 ntTSL 2 BASIC14.15□□□□□ -0.14
HIST2H2BCQ6DN03 AC244669.2-201ENST00000612320 853 ntBASIC14.15□□□□□ -0.14
HIST2H2BCQ6DN03 SHCBP1L-201ENST00000367547 2317 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
HIST2H2BCQ6DN03 CLASRP-203ENST00000391953 1941 ntTSL 2 BASIC14.15□□□□□ -0.14
HIST2H2BCQ6DN03 LRRC27-214ENST00000625755 1738 ntAPPRIS ALT2 TSL 1 (best) BASIC14.15□□□□□ -0.14
HIST2H2BCQ6DN03 PHKG2-201ENST00000328273 1536 ntAPPRIS ALT1 TSL 5 BASIC14.15□□□□□ -0.14
HIST2H2BCQ6DN03 MBD1-207ENST00000398488 1512 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
HIST2H2BCQ6DN03 HLA-B-249ENST00000412585 1547 ntAPPRIS P1 BASIC14.15□□□□□ -0.14
HIST2H2BCQ6DN03 NETO1-207ENST00000583169 2357 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
HIST2H2BCQ6DN03 AC006504.5-203ENST00000590628 1335 ntTSL 1 (best) BASIC14.15□□□□□ -0.15
HIST2H2BCQ6DN03 NUDT4-202ENST00000415493 4839 ntAPPRIS ALT1 TSL 1 (best) BASIC14.15□□□□□ -0.15
HIST2H2BCQ6DN03 EPHA10-201ENST00000319637 2050 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
HIST2H2BCQ6DN03 HDAC2-201ENST00000368632 2084 ntTSL 2 BASIC14.14□□□□□ -0.15
HIST2H2BCQ6DN03 PSTPIP1-203ENST00000558012 1896 ntAPPRIS P2 TSL 1 (best) BASIC14.14□□□□□ -0.15
HIST2H2BCQ6DN03 C10orf107-201ENST00000330194 1685 ntAPPRIS P2 TSL 1 (best) BASIC14.14□□□□□ -0.15
HIST2H2BCQ6DN03 GTF2H4-202ENST00000376316 1673 ntAPPRIS P1 TSL 5 BASIC14.14□□□□□ -0.15
HIST2H2BCQ6DN03 ZCCHC24-202ENST00000372336 4933 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
HIST2H2BCQ6DN03 PPP1R9B-202ENST00000612501 4167 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
HIST2H2BCQ6DN03 NBL1-212ENST00000621723 2133 ntAPPRIS P3 TSL 2 BASIC14.14□□□□□ -0.15
HIST2H2BCQ6DN03 EID3-201ENST00000527879 1467 ntAPPRIS P1 BASIC14.14□□□□□ -0.15
HIST2H2BCQ6DN03 AGAP3-202ENST00000397238 3225 ntAPPRIS P2 TSL 1 (best) BASIC14.14□□□□□ -0.15
HIST2H2BCQ6DN03 HOXC11-201ENST00000243082 2039 ntTSL 3 BASIC14.14□□□□□ -0.15
HIST2H2BCQ6DN03 SOD2-206ENST00000452684 2045 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
HIST2H2BCQ6DN03 KRT8P12-202ENST00000472924 1397 ntBASIC14.14□□□□□ -0.15
HIST2H2BCQ6DN03 SH3BGR-201ENST00000333634 1251 ntAPPRIS P2 TSL 1 (best) BASIC14.14□□□□□ -0.15
HIST2H2BCQ6DN03 SLC25A26-201ENST00000336733 1023 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
HIST2H2BCQ6DN03 RGS10-202ENST00000369103 804 ntAPPRIS P3 TSL 1 (best) BASIC14.14□□□□□ -0.15
HIST2H2BCQ6DN03 C9orf24-203ENST00000379126 496 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
HIST2H2BCQ6DN03 GZMB-202ENST00000382540 816 ntTSL 5 BASIC14.14□□□□□ -0.15
HIST2H2BCQ6DN03 CAMKMT-203ENST00000403853 1114 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
HIST2H2BCQ6DN03 C6orf47-AS1-203ENST00000422049 673 ntTSL 2 BASIC14.14□□□□□ -0.15
HIST2H2BCQ6DN03 AC053503.1-201ENST00000429882 519 ntTSL 3 BASIC14.14□□□□□ -0.15
HIST2H2BCQ6DN03 FNTAP2-201ENST00000430308 634 ntBASIC14.14□□□□□ -0.15
HIST2H2BCQ6DN03 BANF1-202ENST00000445560 946 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
HIST2H2BCQ6DN03 ARTN-209ENST00000479128 471 ntTSL 3 BASIC14.14□□□□□ -0.15
HIST2H2BCQ6DN03 OARD1-212ENST00000482515 832 ntTSL 2 BASIC14.14□□□□□ -0.15
HIST2H2BCQ6DN03 FTH1P14-201ENST00000482930 551 ntBASIC14.14□□□□□ -0.15
HIST2H2BCQ6DN03 HOXC-AS3-201ENST00000509870 544 ntTSL 4 BASIC14.14□□□□□ -0.15
HIST2H2BCQ6DN03 CCKBR-202ENST00000525014 792 ntTSL 4 BASIC14.14□□□□□ -0.15
HIST2H2BCQ6DN03 LINC02299-201ENST00000556669 430 ntTSL 5 BASIC14.14□□□□□ -0.15
HIST2H2BCQ6DN03 AC138028.3-201ENST00000561699 213 ntTSL 3 BASIC14.14□□□□□ -0.15
HIST2H2BCQ6DN03 HAUS2-207ENST00000568846 709 ntTSL 3 BASIC14.14□□□□□ -0.15
HIST2H2BCQ6DN03 AC110285.1-205ENST00000572301 559 ntTSL 3 BASIC14.14□□□□□ -0.15
HIST2H2BCQ6DN03 MIR4492-201ENST00000581627 80 ntBASIC14.14□□□□□ -0.15
HIST2H2BCQ6DN03 CROCCP3-204ENST00000590118 574 ntTSL 4 BASIC14.14□□□□□ -0.15
HIST2H2BCQ6DN03 KCNMA1-278ENST00000640141 5705 ntAPPRIS ALT2 TSL 5 BASIC14.14□□□□□ -0.15
HIST2H2BCQ6DN03 SIL1-213ENST00000509534 1714 ntTSL 5 BASIC14.14□□□□□ -0.15
HIST2H2BCQ6DN03 ACP2-206ENST00000529444 1719 ntTSL 2 BASIC14.14□□□□□ -0.15
Retrieved 100 of 98,524 protein–RNA pairs in 47.6 ms