Protein–RNA interactions for Protein: P78395

PRAME, Melanoma antigen preferentially expressed in tumors, humanhuman

Predictions only

Length 509 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRAMEP78395 LINC00895-201ENST00000629028 1637 ntBASIC16.94■□□□□ 0.3
PRAMEP78395 SGO1-201ENST00000263753 2338 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
PRAMEP78395 PRKAR2B-201ENST00000265717 3745 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
PRAMEP78395 SLC10A3-203ENST00000393586 1893 ntTSL 5 BASIC16.94■□□□□ 0.3
PRAMEP78395 ELL-203ENST00000596124 1852 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
PRAMEP78395 CES3-203ENST00000543856 3178 ntTSL 2 BASIC16.94■□□□□ 0.3
PRAMEP78395 SH3BP5-202ENST00000383791 2822 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
PRAMEP78395 RBPJ-204ENST00000348160 1752 ntAPPRIS ALT1 TSL 1 (best) BASIC16.94■□□□□ 0.3
PRAMEP78395 SLC9A7-201ENST00000328306 3838 ntAPPRIS P3 TSL 1 (best) BASIC16.94■□□□□ 0.3
PRAMEP78395 ZNF134-201ENST00000396161 4914 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
PRAMEP78395 SLC29A2-202ENST00000357440 2514 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
PRAMEP78395 BICD1-205ENST00000550207 1328 ntTSL 3 BASIC16.94■□□□□ 0.3
PRAMEP78395 AL162727.3-201ENST00000635661 2787 ntBASIC16.94■□□□□ 0.3
PRAMEP78395 IRF1-202ENST00000405885 2061 ntAPPRIS P1 TSL 5 BASIC16.93■□□□□ 0.3
PRAMEP78395 AC083864.1-201ENST00000381493 1497 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
PRAMEP78395 EPHA8-201ENST00000166244 4943 ntAPPRIS P1 TSL 2 BASIC16.93■□□□□ 0.3
PRAMEP78395 SIL1-213ENST00000509534 1714 ntTSL 5 BASIC16.93■□□□□ 0.3
PRAMEP78395 IL12RB2-205ENST00000541374 3849 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
PRAMEP78395 SURF4-209ENST00000618229 3200 ntTSL 2 BASIC16.93■□□□□ 0.3
PRAMEP78395 SLC39A8-201ENST00000356736 3144 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
PRAMEP78395 ESR2-205ENST00000358599 1899 ntTSL 2 BASIC16.93■□□□□ 0.3
PRAMEP78395 GABRB3-215ENST00000622697 5876 ntTSL 5 BASIC16.93■□□□□ 0.3
PRAMEP78395 PPP1R26-202ENST00000401470 4769 ntAPPRIS P1 TSL 5 BASIC16.93■□□□□ 0.3
PRAMEP78395 TMEM19-201ENST00000266673 5656 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
PRAMEP78395 GPAT2-201ENST00000359548 2761 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
PRAMEP78395 TTC24-201ENST00000368236 2005 ntAPPRIS P1 TSL 5 BASIC16.93■□□□□ 0.3
PRAMEP78395 EYA2-201ENST00000317304 1540 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
PRAMEP78395 HSF5-201ENST00000323777 4094 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
PRAMEP78395 GSTZ1-202ENST00000349555 867 ntTSL 2 BASIC16.93■□□□□ 0.3
PRAMEP78395 RWDD3-202ENST00000370202 1235 ntAPPRIS P1 TSL 3 BASIC16.93■□□□□ 0.3
PRAMEP78395 FAM99B-201ENST00000382166 1067 ntTSL 5 BASIC16.93■□□□□ 0.3
PRAMEP78395 LINC00421-201ENST00000413833 1054 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
PRAMEP78395 KRT18P27-201ENST00000427733 1299 ntBASIC16.93■□□□□ 0.3
PRAMEP78395 FAAHP1-202ENST00000446499 1238 ntBASIC16.93■□□□□ 0.3
PRAMEP78395 GOLGA7-203ENST00000518270 808 ntAPPRIS P1 TSL 5 BASIC16.93■□□□□ 0.3
PRAMEP78395 GGTLC5P-201ENST00000617623 998 ntBASIC16.93■□□□□ 0.3
PRAMEP78395 ATP6AP2-220ENST00000636970 1187 ntAPPRIS ALT2 TSL 5 BASIC16.93■□□□□ 0.3
PRAMEP78395 RDX-201ENST00000343115 4491 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
PRAMEP78395 SYT6-201ENST00000369547 4369 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
PRAMEP78395 DMKN-209ENST00000429837 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC16.93■□□□□ 0.3
PRAMEP78395 PRSS16-201ENST00000230582 2716 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
PRAMEP78395 GPS1-228ENST00000624957 1825 ntAPPRIS ALT1 TSL 5 BASIC16.93■□□□□ 0.3
PRAMEP78395 FOXA1-201ENST00000250448 2862 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
PRAMEP78395 ARHGEF16-202ENST00000378373 2211 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
PRAMEP78395 GOLGA2-213ENST00000610329 2212 ntTSL 2 BASIC16.93■□□□□ 0.3
PRAMEP78395 ZBTB10-203ENST00000430430 10132 ntAPPRIS P3 TSL 5 BASIC16.93■□□□□ 0.3
PRAMEP78395 ZNF57-201ENST00000306908 2003 ntAPPRIS P2 TSL 1 (best) BASIC16.92■□□□□ 0.3
PRAMEP78395 ZNF57-205ENST00000614108 2002 ntAPPRIS ALT2 TSL 5 BASIC16.92■□□□□ 0.3
PRAMEP78395 GIGYF1-201ENST00000275732 6530 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
PRAMEP78395 FOXRED2-203ENST00000397223 2184 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
PRAMEP78395 KPNA2-202ENST00000537025 2456 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
PRAMEP78395 IRF8-203ENST00000563180 1394 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
PRAMEP78395 FAM228B-210ENST00000615575 1357 ntAPPRIS P3 TSL 5 BASIC16.92■□□□□ 0.3
PRAMEP78395 AC002310.6-201ENST00000624451 1377 ntBASIC16.92■□□□□ 0.3
PRAMEP78395 DRC3-201ENST00000313838 2064 ntAPPRIS P1 TSL 5 BASIC16.92■□□□□ 0.3
PRAMEP78395 PICALM-204ENST00000526033 3613 ntAPPRIS ALT1 TSL 1 (best) BASIC16.92■□□□□ 0.3
PRAMEP78395 LGALS12-201ENST00000255684 1667 ntAPPRIS ALT2 TSL 1 (best) BASIC16.92■□□□□ 0.3
PRAMEP78395 C21orf2-201ENST00000325223 1283 ntAPPRIS ALT2 TSL 1 (best) BASIC16.92■□□□□ 0.3
PRAMEP78395 MED22-202ENST00000371999 987 ntTSL 3 BASIC16.92■□□□□ 0.3
PRAMEP78395 LYPLA2-204ENST00000374505 907 ntTSL 3 BASIC16.92■□□□□ 0.3
PRAMEP78395 RMDN1-202ENST00000430676 1106 ntTSL 2 BASIC16.92■□□□□ 0.3
PRAMEP78395 MOBP-208ENST00000441980 830 ntAPPRIS P4 TSL 4 BASIC16.92■□□□□ 0.3
PRAMEP78395 AC079781.3-201ENST00000449110 356 ntBASIC16.92■□□□□ 0.3
PRAMEP78395 AC018712.1-201ENST00000455767 687 ntBASIC16.92■□□□□ 0.3
PRAMEP78395 TCTN1-208ENST00000471804 718 ntTSL 3 BASIC16.92■□□□□ 0.3
PRAMEP78395 ARSK-202ENST00000504763 1088 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
PRAMEP78395 FAU-209ENST00000531743 697 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
PRAMEP78395 ETFA-208ENST00000559602 792 ntTSL 3 BASIC16.92■□□□□ 0.3
PRAMEP78395 AC105339.3-201ENST00000560043 636 ntBASIC16.92■□□□□ 0.3
PRAMEP78395 CMC2-212ENST00000565650 671 ntAPPRIS P1 TSL 2 BASIC16.92■□□□□ 0.3
PRAMEP78395 ARHGEF25-208ENST00000616622 2103 ntTSL 2 BASIC16.92■□□□□ 0.3
PRAMEP78395 TMEM178A-206ENST00000618232 1286 ntTSL 5 BASIC16.92■□□□□ 0.3
PRAMEP78395 FAM238C-204ENST00000640224 1268 ntTSL 5 BASIC16.92■□□□□ 0.3
PRAMEP78395 LY6E-207ENST00000520466 1419 ntAPPRIS P2 TSL 2 BASIC16.92■□□□□ 0.3
PRAMEP78395 ZFAND6-211ENST00000559157 1559 ntTSL 2 BASIC16.92■□□□□ 0.3
PRAMEP78395 HLA-A-202ENST00000376806 1854 ntBASIC16.92■□□□□ 0.3
PRAMEP78395 NKIRAS1-206ENST00000425478 2014 ntAPPRIS P2 TSL 1 (best) BASIC16.92■□□□□ 0.3
PRAMEP78395 ZFP28-201ENST00000301318 4096 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
PRAMEP78395 TRPC3-202ENST00000379645 3548 ntAPPRIS ALT2 TSL 1 (best) BASIC16.92■□□□□ 0.3
PRAMEP78395 LINC00323-202ENST00000441268 2095 ntTSL 2 BASIC16.92■□□□□ 0.3
PRAMEP78395 TNK2-AS1-201ENST00000458180 2096 ntTSL 2 BASIC16.92■□□□□ 0.3
PRAMEP78395 PCNX3-201ENST00000355703 7105 ntAPPRIS P1 TSL 5 BASIC16.92■□□□□ 0.3
PRAMEP78395 TOM1-204ENST00000411850 2390 ntAPPRIS ALT1 TSL 1 (best) BASIC16.92■□□□□ 0.3
PRAMEP78395 YTHDF3-212ENST00000621413 2370 ntTSL 5 BASIC16.92■□□□□ 0.3
PRAMEP78395 ZNF503-201ENST00000372524 3347 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
PRAMEP78395 SENP1-204ENST00000549518 2260 ntAPPRIS P2 TSL 1 (best) BASIC16.91■□□□□ 0.3
PRAMEP78395 ABHD18-203ENST00000444616 2129 ntAPPRIS P1 TSL 5 BASIC16.91■□□□□ 0.3
PRAMEP78395 PDE4DIP-201ENST00000313431 5676 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
PRAMEP78395 SYBU-230ENST00000532779 2765 ntAPPRIS ALT2 TSL 2 BASIC16.91■□□□□ 0.3
PRAMEP78395 ZNF18-204ENST00000580306 2330 ntAPPRIS P3 TSL 2 BASIC16.91■□□□□ 0.3
PRAMEP78395 GYG1-201ENST00000296048 1890 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
PRAMEP78395 NOVA2-201ENST00000263257 7803 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
PRAMEP78395 NFIC-210ENST00000590282 1558 ntTSL 2 BASIC16.91■□□□□ 0.3
PRAMEP78395 AC006460.2-201ENST00000638173 4744 ntTSL 5 BASIC16.91■□□□□ 0.3
PRAMEP78395 WDR81-204ENST00000419248 3315 ntTSL 2 BASIC16.91■□□□□ 0.3
PRAMEP78395 SLC4A3-204ENST00000373760 4134 ntAPPRIS P1 TSL 5 BASIC16.91■□□□□ 0.3
PRAMEP78395 PPIB-201ENST00000300026 1081 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
PRAMEP78395 VAMP5-201ENST00000306384 689 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
PRAMEP78395 PDLIM4-202ENST00000379018 1006 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
PRAMEP78395 AC073621.1-201ENST00000392730 636 ntBASIC16.91■□□□□ 0.3
Retrieved 100 of 98,524 protein–RNA pairs in 68.9 ms