Protein–RNA interactions for Protein: P56159

GFRA1, GDNF family receptor alpha-1, humanhuman

Predictions only

Length 465 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GFRA1P56159 AL139300.1-201ENST00000472726 2505 ntAPPRIS P1 TSL 2 BASIC14.95□□□□□ -0.02
GFRA1P56159 AC010478.1-202ENST00000559112 2367 ntTSL 2 BASIC14.95□□□□□ -0.02
GFRA1P56159 ZFAND6-201ENST00000261749 1814 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
GFRA1P56159 FAM49B-202ENST00000517654 1817 ntAPPRIS P1 TSL 5 BASIC14.95□□□□□ -0.02
GFRA1P56159 DGKE-204ENST00000572810 1843 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
GFRA1P56159 SELENOF-208ENST00000616787 1835 ntAPPRIS ALT1 TSL 5 BASIC14.95□□□□□ -0.02
GFRA1P56159 NSD3-201ENST00000316985 3995 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
GFRA1P56159 DTX2-206ENST00000430490 2623 ntAPPRIS P3 TSL 1 (best) BASIC14.95□□□□□ -0.02
GFRA1P56159 TPM2-201ENST00000329305 1018 ntAPPRIS ALT1 TSL 2 BASIC14.95□□□□□ -0.02
GFRA1P56159 ETNK1-202ENST00000335148 1083 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
GFRA1P56159 AL139400.1-201ENST00000366220 510 ntBASIC14.95□□□□□ -0.02
GFRA1P56159 BLOC1S2-202ENST00000370372 1249 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
GFRA1P56159 LINC00398-201ENST00000414407 906 ntTSL 2 BASIC14.95□□□□□ -0.02
GFRA1P56159 AL137003.1-201ENST00000423260 491 ntTSL 5 BASIC14.95□□□□□ -0.02
GFRA1P56159 LINC02558-202ENST00000436395 298 ntTSL 5 BASIC14.95□□□□□ -0.02
GFRA1P56159 ITPA-203ENST00000455664 729 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
GFRA1P56159 HLA-J-203ENST00000494367 1087 ntBASIC14.95□□□□□ -0.02
GFRA1P56159 IGHV3-62-201ENST00000520057 340 ntBASIC14.95□□□□□ -0.02
GFRA1P56159 AC124067.2-201ENST00000521989 510 ntTSL 2 BASIC14.95□□□□□ -0.02
GFRA1P56159 LINC02055-207ENST00000524346 706 ntTSL 3 BASIC14.95□□□□□ -0.02
GFRA1P56159 AL133467.1-201ENST00000554161 993 ntTSL 2 BASIC14.95□□□□□ -0.02
GFRA1P56159 METTL23-202ENST00000586200 465 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
GFRA1P56159 SSH2-211ENST00000590153 570 ntTSL 4 BASIC14.95□□□□□ -0.02
GFRA1P56159 METTL23-212ENST00000590964 1006 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
GFRA1P56159 CBY1-211ENST00000619293 1118 ntTSL 5 BASIC14.95□□□□□ -0.02
GFRA1P56159 FGFR2-207ENST00000359354 1680 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
GFRA1P56159 TCEA1-208ENST00000521604 2858 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
GFRA1P56159 SLC39A1-211ENST00000621013 2322 ntAPPRIS P1 TSL 2 BASIC14.95□□□□□ -0.02
GFRA1P56159 C9orf62-201ENST00000623103 1924 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
GFRA1P56159 RNF157-201ENST00000269391 4955 ntAPPRIS P3 TSL 1 (best) BASIC14.95□□□□□ -0.02
GFRA1P56159 PCGF1-201ENST00000233630 1792 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
GFRA1P56159 AP005329.2-201ENST00000580139 1771 ntTSL 2 BASIC14.95□□□□□ -0.02
GFRA1P56159 PANK2-209ENST00000621507 1763 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
GFRA1P56159 SPATC1-201ENST00000377470 2007 ntAPPRIS P3 TSL 1 (best) BASIC14.95□□□□□ -0.02
GFRA1P56159 WIZ-201ENST00000263381 5695 ntAPPRIS P2 TSL 2 BASIC14.95□□□□□ -0.02
GFRA1P56159 SERPINB6-201ENST00000335686 1604 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
GFRA1P56159 RGL3-202ENST00000393423 2278 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
GFRA1P56159 ELAC2-202ENST00000395962 2924 ntTSL 2 BASIC14.95□□□□□ -0.02
GFRA1P56159 CRTC3-201ENST00000268184 2537 ntAPPRIS P3 TSL 1 (best) BASIC14.95□□□□□ -0.02
GFRA1P56159 ITGB7-202ENST00000422257 2791 ntAPPRIS P1 TSL 5 BASIC14.95□□□□□ -0.02
GFRA1P56159 CDKN1A-204ENST00000448526 2104 ntAPPRIS P1 TSL 3 BASIC14.95□□□□□ -0.02
GFRA1P56159 AC078925.2-201ENST00000624013 1973 ntBASIC14.94□□□□□ -0.02
GFRA1P56159 TMTC4-203ENST00000376234 3483 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
GFRA1P56159 PDXP-202ENST00000403251 1571 ntTSL 2 BASIC14.94□□□□□ -0.02
GFRA1P56159 CFC1B-202ENST00000619050 1554 ntTSL 5 BASIC14.94□□□□□ -0.02
GFRA1P56159 CYB5R3-204ENST00000407332 1849 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
GFRA1P56159 C17orf62-201ENST00000306645 2093 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
GFRA1P56159 ACOT12-201ENST00000307624 2086 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
GFRA1P56159 AIFM3-201ENST00000399163 2309 ntAPPRIS ALT1 TSL 1 (best) BASIC14.94□□□□□ -0.02
GFRA1P56159 EIF4H-201ENST00000265753 2679 ntAPPRIS P4 TSL 2 BASIC14.94□□□□□ -0.02
GFRA1P56159 FBXL22-202ENST00000534939 2443 ntAPPRIS ALT2 TSL 3 BASIC14.94□□□□□ -0.02
GFRA1P56159 PODNL1-202ENST00000339560 2165 ntAPPRIS P3 TSL 1 (best) BASIC14.94□□□□□ -0.02
GFRA1P56159 SSBP3-205ENST00000417664 1666 ntTSL 5 BASIC14.94□□□□□ -0.02
GFRA1P56159 NARF-206ENST00000457415 1668 ntTSL 5 BASIC14.94□□□□□ -0.02
GFRA1P56159 BCL2L12-202ENST00000246785 1431 ntAPPRIS P3 TSL 1 (best) BASIC14.94□□□□□ -0.02
GFRA1P56159 DAPK1-207ENST00000469640 5899 ntTSL 5 BASIC14.94□□□□□ -0.02
GFRA1P56159 DEF6-201ENST00000316637 2262 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
GFRA1P56159 GPX3-210ENST00000622181 1757 ntAPPRIS ALT1 TSL 5 BASIC14.94□□□□□ -0.02
GFRA1P56159 IQSEC2-202ENST00000396435 6015 ntAPPRIS ALT2 TSL 1 (best) BASIC14.94□□□□□ -0.02
GFRA1P56159 CA4-201ENST00000300900 1154 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
GFRA1P56159 EXT2-202ENST00000358681 2997 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
GFRA1P56159 MIR346-201ENST00000362234 95 ntBASIC14.94□□□□□ -0.02
GFRA1P56159 FBXO44-205ENST00000376768 959 ntTSL 2 BASIC14.94□□□□□ -0.02
GFRA1P56159 TSSC4-202ENST00000380992 992 ntAPPRIS ALT2 TSL 5 BASIC14.94□□□□□ -0.02
GFRA1P56159 NDUFAF3-203ENST00000395458 808 ntTSL 2 BASIC14.94□□□□□ -0.02
GFRA1P56159 CBX7-202ENST00000401405 784 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
GFRA1P56159 CRIP1-203ENST00000409393 677 ntAPPRIS P1 TSL 3 BASIC14.94□□□□□ -0.02
GFRA1P56159 FAM58DP-201ENST00000428076 619 ntBASIC14.94□□□□□ -0.02
GFRA1P56159 AL451069.2-201ENST00000428814 297 ntTSL 3 BASIC14.94□□□□□ -0.02
GFRA1P56159 NDUFAF5-203ENST00000463598 991 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
GFRA1P56159 SLC50A1-209ENST00000484157 886 ntTSL 3 BASIC14.94□□□□□ -0.02
GFRA1P56159 RPS3A-212ENST00000514682 985 ntTSL 5 BASIC14.94□□□□□ -0.02
GFRA1P56159 FXYD6-209ENST00000530956 579 ntAPPRIS P2 TSL 2 BASIC14.94□□□□□ -0.02
GFRA1P56159 TMEM97-205ENST00000583381 578 ntTSL 4 BASIC14.94□□□□□ -0.02
GFRA1P56159 AC027307.2-201ENST00000591252 911 ntBASIC14.94□□□□□ -0.02
GFRA1P56159 DEF8-225ENST00000569453 1852 ntAPPRIS P4 TSL 2 BASIC14.94□□□□□ -0.02
GFRA1P56159 SGPP2-201ENST00000321276 3336 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
GFRA1P56159 ALMS1P1-202ENST00000450720 1601 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
GFRA1P56159 SCLT1-205ENST00000503401 1604 ntAPPRIS ALT2 TSL 3 BASIC14.94□□□□□ -0.02
GFRA1P56159 RNF128-201ENST00000255499 2817 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
GFRA1P56159 PGRMC2-208ENST00000613358 3783 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
GFRA1P56159 GTPBP3-201ENST00000324894 2579 ntAPPRIS ALT2 TSL 1 (best) BASIC14.94□□□□□ -0.02
GFRA1P56159 F11R-202ENST00000368026 4835 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
GFRA1P56159 SDCBP-202ENST00000413219 2086 ntAPPRIS P3 TSL 2 BASIC14.94□□□□□ -0.02
GFRA1P56159 TRPV4-205ENST00000537083 2436 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
GFRA1P56159 SDR16C5-201ENST00000303749 1840 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
GFRA1P56159 NOX4-215ENST00000534731 2156 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
GFRA1P56159 ZFAND6-211ENST00000559157 1559 ntTSL 2 BASIC14.94□□□□□ -0.02
GFRA1P56159 GABRD-218ENST00000640949 1684 ntTSL 5 BASIC14.93□□□□□ -0.02
GFRA1P56159 PDE1C-206ENST00000396193 5109 ntAPPRIS P4 TSL 2 BASIC14.93□□□□□ -0.02
GFRA1P56159 NFASC-205ENST00000403080 2462 ntTSL 2 BASIC14.93□□□□□ -0.02
GFRA1P56159 DKFZP434K028-202ENST00000536405 2466 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
GFRA1P56159 TRA2A-211ENST00000538367 2142 ntAPPRIS ALT2 TSL 2 BASIC14.93□□□□□ -0.02
GFRA1P56159 IL34-202ENST00000429149 1779 ntAPPRIS P2 TSL 5 BASIC14.93□□□□□ -0.02
GFRA1P56159 TPGS2-220ENST00000610723 1426 ntTSL 3 BASIC14.93□□□□□ -0.02
GFRA1P56159 PRKCB-202ENST00000321728 2689 ntAPPRIS ALT1 TSL 1 (best) BASIC14.93□□□□□ -0.02
GFRA1P56159 ZGLP1-202ENST00000403903 2303 ntAPPRIS P2 TSL 1 (best) BASIC14.93□□□□□ -0.02
GFRA1P56159 ARHGAP9-204ENST00000430041 2323 ntAPPRIS ALT2 TSL 1 (best) BASIC14.93□□□□□ -0.02
GFRA1P56159 AC080080.1-201ENST00000625121 2420 ntBASIC14.93□□□□□ -0.02
GFRA1P56159 AC098591.1-201ENST00000381811 1613 ntTSL 2 BASIC14.93□□□□□ -0.02
Retrieved 100 of 98,524 protein–RNA pairs in 30.3 ms