Protein–RNA interactions for Protein: P55285

CDH6, Cadherin-6, humanhuman

Predictions only

Length 790 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH6P55285 NFATC4-218ENST00000554966 2506 ntAPPRIS ALT2 TSL 1 (best) BASIC17.43■□□□□ 0.38
CDH6P55285 NFATC4-225ENST00000556169 2509 ntAPPRIS ALT2 TSL 1 (best) BASIC17.43■□□□□ 0.38
CDH6P55285 PRKCD-201ENST00000330452 2680 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
CDH6P55285 PTH2-201ENST00000270631 459 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
CDH6P55285 RAB24-204ENST00000393611 1236 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
CDH6P55285 PQLC2L-205ENST00000461040 563 ntAPPRIS ALT2 TSL 3 BASIC17.43■□□□□ 0.38
CDH6P55285 AC021066.1-201ENST00000549788 647 ntTSL 3 BASIC17.43■□□□□ 0.38
CDH6P55285 BSG-214ENST00000614867 960 ntTSL 3 BASIC17.43■□□□□ 0.38
CDH6P55285 AC243547.2-201ENST00000616257 234 ntTSL 3 BASIC17.43■□□□□ 0.38
CDH6P55285 GSR-201ENST00000221130 3119 ntAPPRIS P3 TSL 1 (best) BASIC17.43■□□□□ 0.38
CDH6P55285 B4GALNT4-201ENST00000329962 3444 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
CDH6P55285 STK24-203ENST00000397517 4578 ntTSL 2 BASIC17.43■□□□□ 0.38
CDH6P55285 FNDC5-201ENST00000373471 2732 ntAPPRIS ALT2 TSL 2 BASIC17.43■□□□□ 0.38
CDH6P55285 UCHL5-206ENST00000367455 5327 ntAPPRIS P3 TSL 1 (best) BASIC17.43■□□□□ 0.38
CDH6P55285 WLS-202ENST00000354777 2037 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
CDH6P55285 PCDH8P1-201ENST00000428983 2773 ntBASIC17.43■□□□□ 0.38
CDH6P55285 TSC2-201ENST00000219476 6156 ntAPPRIS P3 TSL 5 BASIC17.43■□□□□ 0.38
CDH6P55285 CNPPD1-201ENST00000360507 2060 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
CDH6P55285 KIFC2-201ENST00000301332 3646 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
CDH6P55285 DYRK1B-205ENST00000597639 1806 ntTSL 5 BASIC17.42■□□□□ 0.38
CDH6P55285 CALB2-202ENST00000349553 1373 ntTSL 5 BASIC17.42■□□□□ 0.38
CDH6P55285 DNAJA3-201ENST00000262375 2763 ntAPPRIS P3 TSL 1 (best) BASIC17.42■□□□□ 0.38
CDH6P55285 AC091980.2-201ENST00000619056 2775 ntAPPRIS P1 BASIC17.42■□□□□ 0.38
CDH6P55285 SLC43A3-203ENST00000395124 2617 ntAPPRIS P3 TSL 1 (best) BASIC17.42■□□□□ 0.38
CDH6P55285 PRDM5-202ENST00000394435 2492 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
CDH6P55285 IKBKE-204ENST00000584998 2487 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
CDH6P55285 PELI2-201ENST00000267460 5909 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
CDH6P55285 TVP23B-202ENST00000476139 2989 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
CDH6P55285 CBX6-202ENST00000407418 6122 ntAPPRIS P3 TSL 1 (best) BASIC17.42■□□□□ 0.38
CDH6P55285 AMOTL2-211ENST00000513145 2653 ntAPPRIS ALT1 TSL 1 (best) BASIC17.42■□□□□ 0.38
CDH6P55285 KCMF1-201ENST00000409785 7568 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
CDH6P55285 MFSD1-202ENST00000392813 2244 ntTSL 2 BASIC17.42■□□□□ 0.38
CDH6P55285 LINC00612-201ENST00000538094 2213 ntTSL 2 BASIC17.42■□□□□ 0.38
CDH6P55285 PDE12-202ENST00000487257 3040 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
CDH6P55285 LCE1F-201ENST00000334371 357 ntAPPRIS P1 BASIC17.42■□□□□ 0.38
CDH6P55285 EXOSC3-202ENST00000396521 768 ntTSL 2 BASIC17.42■□□□□ 0.38
CDH6P55285 RFXANK-203ENST00000407360 1212 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
CDH6P55285 AC009078.2-202ENST00000463353 338 ntBASIC17.42■□□□□ 0.38
CDH6P55285 MRPL52-208ENST00000553711 586 ntTSL 3 BASIC17.42■□□□□ 0.38
CDH6P55285 AC013565.3-202ENST00000570120 460 ntTSL 2 BASIC17.42■□□□□ 0.38
CDH6P55285 AC005412.3-201ENST00000580309 715 ntBASIC17.42■□□□□ 0.38
CDH6P55285 SCN5A-214ENST00000612060 714 ntTSL 5 BASIC17.42■□□□□ 0.38
CDH6P55285 GPX4-212ENST00000616066 924 ntAPPRIS ALT1 TSL 5 BASIC17.42■□□□□ 0.38
CDH6P55285 IZUMO4-213ENST00000620263 947 ntTSL 3 BASIC17.42■□□□□ 0.38
CDH6P55285 AL162311.3-201ENST00000555918 2867 ntTSL 2 BASIC17.42■□□□□ 0.38
CDH6P55285 KLC2-203ENST00000394066 2591 ntTSL 2 BASIC17.42■□□□□ 0.38
CDH6P55285 ZNF408-201ENST00000311764 2442 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
CDH6P55285 F7-201ENST00000346342 2409 ntAPPRIS ALT2 TSL 1 (best) BASIC17.42■□□□□ 0.38
CDH6P55285 FBXL22-202ENST00000534939 2443 ntAPPRIS ALT2 TSL 3 BASIC17.42■□□□□ 0.38
CDH6P55285 CDIP1-207ENST00000564828 1636 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
CDH6P55285 WDR4-201ENST00000330317 1471 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
CDH6P55285 CYP51A1P2-201ENST00000419457 1499 ntBASIC17.42■□□□□ 0.38
CDH6P55285 PC-214ENST00000628663 1470 ntTSL 5 BASIC17.42■□□□□ 0.38
CDH6P55285 SLC4A5-203ENST00000377632 3123 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
CDH6P55285 CD1E-213ENST00000444681 1820 ntAPPRIS ALT2 TSL 1 (best) BASIC17.42■□□□□ 0.38
CDH6P55285 PIGQ-201ENST00000026218 2846 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
CDH6P55285 CD276-213ENST00000561213 2690 ntAPPRIS ALT2 TSL 2 BASIC17.42■□□□□ 0.38
CDH6P55285 CYP46A1-201ENST00000261835 2181 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
CDH6P55285 RSRP1-201ENST00000243189 1502 ntAPPRIS P2 TSL 1 (best) BASIC17.42■□□□□ 0.38
CDH6P55285 ZNF514-202ENST00000411425 2755 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
CDH6P55285 CHFR-203ENST00000432561 2648 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
CDH6P55285 STKLD1-201ENST00000371957 2825 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
CDH6P55285 KRT8P39-201ENST00000396270 1433 ntBASIC17.41■□□□□ 0.38
CDH6P55285 SYTL3-203ENST00000367081 2692 ntAPPRIS P3 TSL 5 BASIC17.41■□□□□ 0.38
CDH6P55285 AC092364.2-201ENST00000596710 2692 ntBASIC17.41■□□□□ 0.38
CDH6P55285 SULT1A2-204ENST00000533150 1991 ntTSL 2 BASIC17.41■□□□□ 0.38
CDH6P55285 ADAM11-203ENST00000535346 2529 ntTSL 2 BASIC17.41■□□□□ 0.38
CDH6P55285 ANKRD35-202ENST00000544626 3093 ntTSL 5 BASIC17.41■□□□□ 0.38
CDH6P55285 PDXDC1-204ENST00000455313 2183 ntTSL 2 BASIC17.41■□□□□ 0.38
CDH6P55285 KCNMA1-201ENST00000286627 6194 ntAPPRIS P3 TSL 1 (best) BASIC17.41■□□□□ 0.38
CDH6P55285 GHSR-201ENST00000241256 1172 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
CDH6P55285 YIF1B-203ENST00000339413 1225 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
CDH6P55285 CD1E-209ENST00000368164 869 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
CDH6P55285 MSANTD3-201ENST00000374885 786 ntTSL 2 BASIC17.41■□□□□ 0.38
CDH6P55285 AC098831.1-202ENST00000438821 336 ntBASIC17.41■□□□□ 0.38
CDH6P55285 RNA5SP419-201ENST00000515908 135 ntBASIC17.41■□□□□ 0.38
CDH6P55285 PENK-208ENST00000523051 772 ntTSL 5 BASIC17.41■□□□□ 0.38
CDH6P55285 SPCS2-207ENST00000530257 612 ntTSL 3 BASIC17.41■□□□□ 0.38
CDH6P55285 FAM181A-205ENST00000557719 1072 ntAPPRIS P1 TSL 2 BASIC17.41■□□□□ 0.38
CDH6P55285 UBE2Q2P1-205ENST00000559871 534 ntTSL 5 BASIC17.41■□□□□ 0.38
CDH6P55285 ZFPM1-203ENST00000562437 502 ntTSL 2 BASIC17.41■□□□□ 0.38
CDH6P55285 PRSS8-206ENST00000568261 1214 ntTSL 2 BASIC17.41■□□□□ 0.38
CDH6P55285 OR7E47P-204ENST00000575924 449 ntBASIC17.41■□□□□ 0.38
CDH6P55285 CYP2A7P1-201ENST00000595391 815 ntBASIC17.41■□□□□ 0.38
CDH6P55285 AL121894.2-201ENST00000602977 491 ntBASIC17.41■□□□□ 0.38
CDH6P55285 MAGIX-204ENST00000614074 778 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
CDH6P55285 C16orf89-203ENST00000474471 1829 ntAPPRIS ALT2 TSL 5 BASIC17.41■□□□□ 0.38
CDH6P55285 DKC1-201ENST00000369550 2577 ntAPPRIS P3 TSL 1 (best) BASIC17.41■□□□□ 0.38
CDH6P55285 AC026412.1-202ENST00000512335 2231 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
CDH6P55285 PRR15-201ENST00000319694 1678 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
CDH6P55285 IGHM-202ENST00000637539 1683 ntAPPRIS P5 BASIC17.41■□□□□ 0.38
CDH6P55285 ARL14EP-201ENST00000282032 2430 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
CDH6P55285 SPAG9-205ENST00000505279 4659 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
CDH6P55285 REPS1-208ENST00000450536 4537 ntAPPRIS ALT1 TSL 1 (best) BASIC17.41■□□□□ 0.38
CDH6P55285 SARS2-201ENST00000221431 2057 ntAPPRIS P2 TSL 1 (best) BASIC17.41■□□□□ 0.38
CDH6P55285 AC006449.5-201ENST00000610658 2098 ntBASIC17.41■□□□□ 0.38
CDH6P55285 LAT2-204ENST00000398475 2453 ntAPPRIS P2 TSL 1 (best) BASIC17.41■□□□□ 0.38
CDH6P55285 PLXND1-201ENST00000324093 7094 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
CDH6P55285 ADRB1-201ENST00000369295 2853 ntAPPRIS P1 BASIC17.41■□□□□ 0.38
CDH6P55285 SLC9A5-201ENST00000299798 3736 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Retrieved 100 of 98,524 protein–RNA pairs in 33.3 ms