Protein–RNA interactions for Protein: P52926

HMGA2, High mobility group protein HMGI-C, humanhuman

Predictions only

Length 109 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGA2P52926 AC019205.2-202ENST00000441363 2403 ntTSL 5 BASIC15.28■□□□□ 0.04
HMGA2P52926 ALDOA-201ENST00000338110 2384 ntAPPRIS P2 TSL 1 (best) BASIC15.28■□□□□ 0.04
HMGA2P52926 BFSP2-201ENST00000302334 1558 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
HMGA2P52926 HPS1-202ENST00000338546 1580 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
HMGA2P52926 AC119396.1-201ENST00000576789 1558 ntAPPRIS P1 TSL 5 BASIC15.28■□□□□ 0.04
HMGA2P52926 CTCF-201ENST00000264010 3939 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
HMGA2P52926 KIFC3-206ENST00000541240 3047 ntTSL 2 BASIC15.28■□□□□ 0.04
HMGA2P52926 SNCAIP-202ENST00000261368 3745 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
HMGA2P52926 TPD52L2-203ENST00000348257 2237 ntAPPRIS ALT1 TSL 1 (best) BASIC15.28■□□□□ 0.04
HMGA2P52926 RGR-202ENST00000359452 2247 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
HMGA2P52926 SLC3A2-208ENST00000536981 1486 ntTSL 2 BASIC15.28■□□□□ 0.04
HMGA2P52926 EGFR-203ENST00000344576 2864 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
HMGA2P52926 MXI1-202ENST00000332674 3470 ntAPPRIS P4 TSL 1 (best) BASIC15.28■□□□□ 0.04
HMGA2P52926 SCLT1-208ENST00000506368 2096 ntAPPRIS ALT2 TSL 1 (best) BASIC15.28■□□□□ 0.04
HMGA2P52926 TMEM177-201ENST00000272521 1394 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
HMGA2P52926 PLCB2-201ENST00000260402 4616 ntAPPRIS P3 TSL 2 BASIC15.28■□□□□ 0.04
HMGA2P52926 SF3A2-201ENST00000221494 1963 ntAPPRIS P2 TSL 1 (best) BASIC15.28■□□□□ 0.04
HMGA2P52926 DGCR6-201ENST00000331444 1214 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
HMGA2P52926 PDLIM7-205ENST00000393551 1226 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
HMGA2P52926 COLEC11-207ENST00000404205 1062 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
HMGA2P52926 SBDSP1-202ENST00000423945 618 ntTSL 3 BASIC15.28■□□□□ 0.04
HMGA2P52926 TMPOP1-202ENST00000424642 1267 ntBASIC15.28■□□□□ 0.04
HMGA2P52926 AC099329.3-201ENST00000431549 602 ntAPPRIS P1 TSL 4 BASIC15.28■□□□□ 0.04
HMGA2P52926 KRT16P4-201ENST00000453883 522 ntBASIC15.28■□□□□ 0.04
HMGA2P52926 AC106795.1-205ENST00000512851 1056 ntBASIC15.28■□□□□ 0.04
HMGA2P52926 KBTBD4-203ENST00000525720 980 ntTSL 3 BASIC15.28■□□□□ 0.04
HMGA2P52926 BLOC1S1-204ENST00000549147 1229 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
HMGA2P52926 ZNF549-203ENST00000594943 556 ntTSL 4 BASIC15.28■□□□□ 0.04
HMGA2P52926 TUBB4A-209ENST00000598006 565 ntTSL 2 BASIC15.28■□□□□ 0.04
HMGA2P52926 PGPEP1-209ENST00000604499 769 ntTSL 5 BASIC15.28■□□□□ 0.04
HMGA2P52926 AL591684.3-201ENST00000605187 298 ntBASIC15.28■□□□□ 0.04
HMGA2P52926 DNASE1L2-206ENST00000613572 1260 ntAPPRIS P1 TSL 5 BASIC15.28■□□□□ 0.04
HMGA2P52926 CCHCR1-202ENST00000396263 2490 ntTSL 5 BASIC15.28■□□□□ 0.04
HMGA2P52926 GPAT2-204ENST00000453542 2466 ntTSL 2 BASIC15.28■□□□□ 0.04
HMGA2P52926 ADGRB2-212ENST00000527361 4919 ntAPPRIS ALT2 TSL 1 (best) BASIC15.28■□□□□ 0.04
HMGA2P52926 SDR16C5-201ENST00000303749 1840 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
HMGA2P52926 NSMF-205ENST00000371474 3571 ntAPPRIS ALT1 TSL 1 (best) BASIC15.28■□□□□ 0.04
HMGA2P52926 NSMF-208ENST00000437259 3577 ntAPPRIS ALT1 TSL 5 BASIC15.28■□□□□ 0.04
HMGA2P52926 DHX36-202ENST00000329463 2985 ntAPPRIS ALT2 TSL 1 (best) BASIC15.28■□□□□ 0.04
HMGA2P52926 FSD2-202ENST00000541889 2356 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
HMGA2P52926 HARS-204ENST00000438307 1789 ntTSL 2 BASIC15.28■□□□□ 0.04
HMGA2P52926 RDH10-201ENST00000240285 3949 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
HMGA2P52926 MAP4K3-201ENST00000263881 4362 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
HMGA2P52926 GALNT14-201ENST00000324589 2169 ntTSL 2 BASIC15.28■□□□□ 0.04
HMGA2P52926 PGAP2-205ENST00000396993 1566 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
HMGA2P52926 SERPINB6-207ENST00000612421 1570 ntTSL 2 BASIC15.28■□□□□ 0.04
HMGA2P52926 USP4-201ENST00000265560 3126 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
HMGA2P52926 PLAA-205ENST00000520884 2041 ntTSL 2 BASIC15.27■□□□□ 0.04
HMGA2P52926 HAPLN3-201ENST00000359595 1980 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
HMGA2P52926 RNH1-204ENST00000397614 1864 ntAPPRIS P1 TSL 5 BASIC15.27■□□□□ 0.04
HMGA2P52926 NRXN1-229ENST00000628515 3243 ntTSL 5 BASIC15.27■□□□□ 0.04
HMGA2P52926 LILRA6-201ENST00000245621 1395 ntAPPRIS ALT2 TSL 5 BASIC15.27■□□□□ 0.04
HMGA2P52926 COTL1-201ENST00000262428 1843 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
HMGA2P52926 BIN3-201ENST00000276416 1835 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
HMGA2P52926 NPR3-203ENST00000415167 1753 ntAPPRIS P3 TSL 1 (best) BASIC15.27■□□□□ 0.04
HMGA2P52926 MST1L-201ENST00000442552 2185 ntBASIC15.27■□□□□ 0.04
HMGA2P52926 MRPL43-203ENST00000318364 1010 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
HMGA2P52926 MRPL43-204ENST00000342071 894 ntTSL 5 BASIC15.27■□□□□ 0.04
HMGA2P52926 MEAF6-202ENST00000373073 603 ntTSL 3 BASIC15.27■□□□□ 0.04
HMGA2P52926 MLLT10-205ENST00000377100 1136 ntTSL 2 BASIC15.27■□□□□ 0.04
HMGA2P52926 NDUFA13-201ENST00000428459 576 ntTSL 2 BASIC15.27■□□□□ 0.04
HMGA2P52926 DHRS12-203ENST00000444610 1162 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
HMGA2P52926 AC016999.1-201ENST00000447880 452 ntTSL 3 BASIC15.27■□□□□ 0.04
HMGA2P52926 ELOVL2-AS1-202ENST00000456616 903 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
HMGA2P52926 LINC02447-202ENST00000501888 2146 ntBASIC15.27■□□□□ 0.04
HMGA2P52926 ANKRD29-202ENST00000585908 846 ntTSL 2 BASIC15.27■□□□□ 0.04
HMGA2P52926 AP001269.4-201ENST00000609611 512 ntBASIC15.27■□□□□ 0.04
HMGA2P52926 HIST1H2AK-201ENST00000618958 393 ntAPPRIS P1 BASIC15.27■□□□□ 0.04
HMGA2P52926 SPACA6-213ENST00000637797 1073 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
HMGA2P52926 MFGE8-215ENST00000566497 1689 ntAPPRIS P1 TSL 5 BASIC15.27■□□□□ 0.03
HMGA2P52926 SPATC1-201ENST00000377470 2007 ntAPPRIS P3 TSL 1 (best) BASIC15.27■□□□□ 0.03
HMGA2P52926 GSPT2-201ENST00000340438 2802 ntAPPRIS P1 BASIC15.27■□□□□ 0.03
HMGA2P52926 TMC7-201ENST00000304381 3640 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
HMGA2P52926 CD55-204ENST00000367064 2760 ntAPPRIS P3 TSL 1 (best) BASIC15.27■□□□□ 0.03
HMGA2P52926 GPR89B-201ENST00000314163 1934 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
HMGA2P52926 GPR161-204ENST00000367838 2676 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
HMGA2P52926 PNCK-202ENST00000370142 1525 ntTSL 5 BASIC15.27■□□□□ 0.03
HMGA2P52926 NF1-211ENST00000487476 2265 ntTSL 1 (best) BASIC15.27■□□□□ 0.03
HMGA2P52926 ARL8B-201ENST00000256496 3005 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
HMGA2P52926 CRYZL1-202ENST00000361534 2224 ntTSL 1 (best) BASIC15.27■□□□□ 0.03
HMGA2P52926 CAP2-202ENST00000378990 1812 ntTSL 2 BASIC15.27■□□□□ 0.03
HMGA2P52926 RNF182-206ENST00000537388 3274 ntAPPRIS P1 TSL 2 BASIC15.27■□□□□ 0.03
HMGA2P52926 VIPR2-201ENST00000262178 3944 ntAPPRIS P2 TSL 1 (best) BASIC15.26■□□□□ 0.03
HMGA2P52926 ZDHHC20-202ENST00000382466 5338 ntAPPRIS P3 TSL 1 (best) BASIC15.26■□□□□ 0.03
HMGA2P52926 EIPR1-202ENST00000398659 1795 ntTSL 5 BASIC15.26■□□□□ 0.03
HMGA2P52926 CCDC71L-202ENST00000523505 4232 ntAPPRIS P2 BASIC15.26■□□□□ 0.03
HMGA2P52926 RUNDC3B-203ENST00000394654 2064 ntAPPRIS P4 TSL 2 BASIC15.26■□□□□ 0.03
HMGA2P52926 WDR45-239ENST00000634944 1745 ntAPPRIS P1 TSL 5 BASIC15.26■□□□□ 0.03
HMGA2P52926 SOX30-202ENST00000311371 2716 ntAPPRIS ALT2 TSL 1 (best) BASIC15.26■□□□□ 0.03
HMGA2P52926 HOXA5-201ENST00000222726 1657 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
HMGA2P52926 FES-204ENST00000414248 2327 ntTSL 2 BASIC15.26■□□□□ 0.03
HMGA2P52926 PRKRA-203ENST00000432031 1344 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
HMGA2P52926 ARL15-201ENST00000502271 3248 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
HMGA2P52926 HS6ST2-201ENST00000370833 1938 ntTSL 5 BASIC15.26■□□□□ 0.03
HMGA2P52926 BOLA2B-201ENST00000305321 1012 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
HMGA2P52926 BOLA2-201ENST00000330978 1012 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
HMGA2P52926 EFCAB2-203ENST00000366523 1233 ntAPPRIS P1 TSL 3 BASIC15.26■□□□□ 0.03
HMGA2P52926 SLC2A8-201ENST00000373352 914 ntTSL 2 BASIC15.26■□□□□ 0.03
HMGA2P52926 PCED1CP-201ENST00000419887 785 ntBASIC15.26■□□□□ 0.03
HMGA2P52926 WDR53-204ENST00000433160 887 ntTSL 5 BASIC15.26■□□□□ 0.03
Retrieved 100 of 98,524 protein–RNA pairs in 28.5 ms