Protein–RNA interactions for Protein: P49959

MRE11, Double-strand break repair protein MRE11, humanhuman

Predictions only

Length 708 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MRE11P49959 COPS3-212ENST00000539941 1699 ntTSL 2 BASIC19.58■□□□□ 0.72
MRE11P49959 GIGYF1-201ENST00000275732 6530 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
MRE11P49959 SCP2-213ENST00000528311 1896 ntTSL 2 BASIC19.58■□□□□ 0.72
MRE11P49959 TSC2-202ENST00000350773 5532 ntAPPRIS ALT2 TSL 1 (best) BASIC19.58■□□□□ 0.72
MRE11P49959 GALNT16-202ENST00000448469 2270 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
MRE11P49959 P2RY6-209ENST00000540342 1611 ntAPPRIS P1 TSL 2 BASIC19.58■□□□□ 0.72
MRE11P49959 LINGO1-201ENST00000355300 3055 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
MRE11P49959 RB1CC1-201ENST00000025008 6635 ntAPPRIS P3 TSL 1 (best) BASIC19.57■□□□□ 0.72
MRE11P49959 AC087164.1-202ENST00000583062 2158 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
MRE11P49959 HLA-A-201ENST00000376802 1334 ntBASIC19.57■□□□□ 0.72
MRE11P49959 HAGHL-203ENST00000389703 1347 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
MRE11P49959 SLC6A11-201ENST00000254488 4296 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
MRE11P49959 TBX4-201ENST00000240335 2470 ntAPPRIS P3 TSL 1 (best) BASIC19.57■□□□□ 0.72
MRE11P49959 SNX31-201ENST00000311812 2457 ntAPPRIS P1 TSL 2 BASIC19.57■□□□□ 0.72
MRE11P49959 SSBP3-205ENST00000417664 1666 ntTSL 5 BASIC19.57■□□□□ 0.72
MRE11P49959 KLHL7-201ENST00000322275 969 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
MRE11P49959 PTPMT1-201ENST00000326656 928 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
MRE11P49959 HSD11B1L-205ENST00000422535 730 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
MRE11P49959 DMKN-215ENST00000451297 1111 ntAPPRIS ALT2 TSL 1 (best) BASIC19.57■□□□□ 0.72
MRE11P49959 GXYLT1P6-201ENST00000456472 1187 ntBASIC19.57■□□□□ 0.72
MRE11P49959 PLXND1-205ENST00000504689 546 ntTSL 3 BASIC19.57■□□□□ 0.72
MRE11P49959 ZNF706-206ENST00000519744 785 ntTSL 3 BASIC19.57■□□□□ 0.72
MRE11P49959 LINC02237-202ENST00000521904 477 ntTSL 3 BASIC19.57■□□□□ 0.72
MRE11P49959 BORCS8-206ENST00000585679 801 ntTSL 3 BASIC19.57■□□□□ 0.72
MRE11P49959 LINC01711-201ENST00000598340 967 ntBASIC19.57■□□□□ 0.72
MRE11P49959 NXNL2-205ENST00000618633 739 ntTSL 5 BASIC19.57■□□□□ 0.72
MRE11P49959 HYMAI.1-201ENST00000620949 238 ntBASIC19.57■□□□□ 0.72
MRE11P49959 TUBA1C-201ENST00000301072 3001 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
MRE11P49959 LIMK2-203ENST00000340552 2789 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
MRE11P49959 SEPT6-209ENST00000489216 1617 ntAPPRIS ALT1 TSL 1 (best) BASIC19.57■□□□□ 0.72
MRE11P49959 AIFM2-202ENST00000373248 2570 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
MRE11P49959 ABHD11-205ENST00000437775 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC19.57■□□□□ 0.72
MRE11P49959 AC092338.2-201ENST00000568827 1415 ntBASIC19.57■□□□□ 0.72
MRE11P49959 SLC35A2-217ENST00000635589 1424 ntTSL 2 BASIC19.57■□□□□ 0.72
MRE11P49959 LGALS3BP-218ENST00000591778 1961 ntTSL 2 BASIC19.57■□□□□ 0.72
MRE11P49959 LINC01136-203ENST00000457348 2539 ntTSL 2 BASIC19.57■□□□□ 0.72
MRE11P49959 AC027312.1-201ENST00000523591 1571 ntTSL 5 BASIC19.57■□□□□ 0.72
MRE11P49959 MOV10L1-201ENST00000262794 3960 ntAPPRIS P3 TSL 1 (best) BASIC19.57■□□□□ 0.72
MRE11P49959 PAXBP1-202ENST00000331923 3995 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
MRE11P49959 SPOP-201ENST00000347630 2965 ntAPPRIS P1 TSL 5 BASIC19.56■□□□□ 0.72
MRE11P49959 TCAF2P1-201ENST00000291129 2421 ntBASIC19.56■□□□□ 0.72
MRE11P49959 LRRFIP1-201ENST00000244815 4370 ntAPPRIS P3 TSL 1 (best) BASIC19.56■□□□□ 0.72
MRE11P49959 HLA-A-204ENST00000396634 1868 ntAPPRIS P1 BASIC19.56■□□□□ 0.72
MRE11P49959 NFATC4-231ENST00000557451 5613 ntAPPRIS ALT2 TSL 1 (best) BASIC19.56■□□□□ 0.72
MRE11P49959 TMEM25-206ENST00000442938 2228 ntTSL 2 BASIC19.56■□□□□ 0.72
MRE11P49959 ABHD10-201ENST00000273359 2590 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
MRE11P49959 CDH1-202ENST00000422392 2567 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
MRE11P49959 MEX3A-202ENST00000532414 6124 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
MRE11P49959 PDS5A-201ENST00000303538 7176 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
MRE11P49959 RBBP8-201ENST00000327155 3288 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
MRE11P49959 NTMT1-203ENST00000372483 1315 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
MRE11P49959 RNF170-205ENST00000526349 1338 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
MRE11P49959 AL009178.2-201ENST00000597278 2719 ntBASIC19.56■□□□□ 0.72
MRE11P49959 AGTPBP1-201ENST00000337006 4473 ntTSL 5 BASIC19.56■□□□□ 0.72
MRE11P49959 CLDN4-201ENST00000340958 1831 ntAPPRIS P1 BASIC19.56■□□□□ 0.72
MRE11P49959 LTK-204ENST00000561619 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC19.56■□□□□ 0.72
MRE11P49959 OGFOD2-222ENST00000545317 1481 ntTSL 2 BASIC19.56■□□□□ 0.72
MRE11P49959 KLHDC8B-201ENST00000332780 1959 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
MRE11P49959 HSPA12B-201ENST00000254963 3151 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
MRE11P49959 GRAMD4-203ENST00000408031 2834 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
MRE11P49959 VTN-201ENST00000226218 2149 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
MRE11P49959 ALKBH6-201ENST00000252984 955 ntAPPRIS ALT2 TSL 1 (best) BASIC19.56■□□□□ 0.72
MRE11P49959 ZFAND2A-201ENST00000316495 860 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
MRE11P49959 ZFAND2A-203ENST00000401903 968 ntTSL 3 BASIC19.56■□□□□ 0.72
MRE11P49959 STEAP3-204ENST00000409811 2103 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
MRE11P49959 ST6GALNAC4P1-201ENST00000435385 499 ntBASIC19.56■□□□□ 0.72
MRE11P49959 MFAP1P1-201ENST00000442257 1255 ntBASIC19.56■□□□□ 0.72
MRE11P49959 VCX3B-203ENST00000444481 812 ntAPPRIS ALT2 TSL 5 BASIC19.56■□□□□ 0.72
MRE11P49959 AC002116.1-201ENST00000473572 1130 ntTSL 2 BASIC19.56■□□□□ 0.72
MRE11P49959 KCNMA1-219ENST00000480683 2963 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
MRE11P49959 AC008825.1-201ENST00000504398 452 ntTSL 3 BASIC19.56■□□□□ 0.72
MRE11P49959 AC139887.2-202ENST00000507446 534 ntTSL 4 BASIC19.56■□□□□ 0.72
MRE11P49959 DYNLL1-204ENST00000548214 616 ntTSL 2 BASIC19.56■□□□□ 0.72
MRE11P49959 AC104758.1-202ENST00000568184 602 ntTSL 3 BASIC19.56■□□□□ 0.72
MRE11P49959 CALM3-211ENST00000598871 561 ntTSL 4 BASIC19.56■□□□□ 0.72
MRE11P49959 VCX3A-203ENST00000612369 812 ntAPPRIS ALT2 TSL 5 BASIC19.56■□□□□ 0.72
MRE11P49959 SALL3-206ENST00000616649 2958 ntTSL 5 BASIC19.56■□□□□ 0.72
MRE11P49959 GPSM1-205ENST00000440944 3633 ntAPPRIS P2 TSL 5 BASIC19.56■□□□□ 0.72
MRE11P49959 AIFM1-201ENST00000287295 2260 ntAPPRIS P4 TSL 1 (best) BASIC19.56■□□□□ 0.72
MRE11P49959 MCTP2-205ENST00000543482 1422 ntTSL 2 BASIC19.56■□□□□ 0.72
MRE11P49959 HNRNPUL1-220ENST00000602130 2932 ntAPPRIS ALT2 TSL 1 (best) BASIC19.56■□□□□ 0.72
MRE11P49959 FCER2-205ENST00000597921 1560 ntAPPRIS P2 TSL 1 (best) BASIC19.56■□□□□ 0.72
MRE11P49959 SPATA20-201ENST00000006658 2719 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
MRE11P49959 RAB40B-206ENST00000571995 3859 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
MRE11P49959 ACBD5-201ENST00000375888 1747 ntAPPRIS ALT2 TSL 5 BASIC19.56■□□□□ 0.72
MRE11P49959 FASTKD5-201ENST00000380266 2874 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
MRE11P49959 CACNB3-202ENST00000536187 1872 ntTSL 2 BASIC19.56■□□□□ 0.72
MRE11P49959 GTPBP8-203ENST00000383678 1360 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
MRE11P49959 C19orf48-201ENST00000345523 1503 ntAPPRIS P1 TSL 2 BASIC19.56■□□□□ 0.72
MRE11P49959 HOXA3-202ENST00000396352 3263 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
MRE11P49959 DAP3-214ENST00000471642 1671 ntTSL 5 BASIC19.56■□□□□ 0.72
MRE11P49959 AMT-250ENST00000637682 1823 ntTSL 5 BASIC19.55■□□□□ 0.72
MRE11P49959 UNC13A-205ENST00000551649 6052 ntAPPRIS ALT2 TSL 5 BASIC19.55■□□□□ 0.72
MRE11P49959 SPCS2-201ENST00000263672 2708 ntAPPRIS P2 TSL 1 (best) BASIC19.55■□□□□ 0.72
MRE11P49959 OSGIN2-202ENST00000451899 4266 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
MRE11P49959 SIGLEC7-201ENST00000305628 1469 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
MRE11P49959 NEO1-206ENST00000558964 4441 ntAPPRIS ALT2 TSL 1 (best) BASIC19.55■□□□□ 0.72
MRE11P49959 NRN1-201ENST00000244766 1624 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
MRE11P49959 JPT1-203ENST00000409753 1605 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
MRE11P49959 HOXD3-202ENST00000410016 2384 ntAPPRIS P1 TSL 5 BASIC19.55■□□□□ 0.72
Retrieved 100 of 98,524 protein–RNA pairs in 51.8 ms