Protein–RNA interactions for Protein: P49238

CX3CR1, CX3C chemokine receptor 1, humanhuman

Predictions only

Length 355 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CX3CR1P49238 GTF3C4-201ENST00000372146 9043 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
CX3CR1P49238 AFG3L2-201ENST00000269143 3247 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
CX3CR1P49238 C6orf136-203ENST00000376473 1402 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
CX3CR1P49238 ERVK13-1-203ENST00000564340 1449 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
CX3CR1P49238 PDE4C-201ENST00000262805 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC14.75□□□□□ -0.05
CX3CR1P49238 KCNG3-201ENST00000306078 3824 ntAPPRIS P3 TSL 1 (best) BASIC14.75□□□□□ -0.05
CX3CR1P49238 AC091980.2-201ENST00000619056 2775 ntAPPRIS P1 BASIC14.75□□□□□ -0.05
CX3CR1P49238 C2orf81-206ENST00000640868 2407 ntAPPRIS ALT2 BASIC14.75□□□□□ -0.05
CX3CR1P49238 SIL1-213ENST00000509534 1714 ntTSL 5 BASIC14.75□□□□□ -0.05
CX3CR1P49238 DUS3L-202ENST00000320699 1355 ntAPPRIS ALT2 TSL 1 (best) BASIC14.75□□□□□ -0.05
CX3CR1P49238 HCFC1-201ENST00000310441 8869 ntAPPRIS P2 TSL 1 (best) BASIC14.75□□□□□ -0.05
CX3CR1P49238 ITPR3-201ENST00000374316 9870 ntAPPRIS P1 TSL 5 BASIC14.75□□□□□ -0.05
CX3CR1P49238 NFATC4-201ENST00000250373 4749 ntAPPRIS P3 TSL 1 (best) BASIC14.75□□□□□ -0.05
CX3CR1P49238 PIGT-207ENST00000543458 2037 ntTSL 2 BASIC14.75□□□□□ -0.05
CX3CR1P49238 AKR1C7P-201ENST00000305623 895 ntBASIC14.75□□□□□ -0.05
CX3CR1P49238 STK39-201ENST00000355999 3820 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
CX3CR1P49238 AL355310.2-201ENST00000369843 688 ntTSL 3 BASIC14.75□□□□□ -0.05
CX3CR1P49238 UCHL1-204ENST00000503431 917 ntAPPRIS P1 TSL 3 BASIC14.75□□□□□ -0.05
CX3CR1P49238 TMEM106C-214ENST00000550161 976 ntTSL 3 BASIC14.75□□□□□ -0.05
CX3CR1P49238 DHRS4-205ENST00000558263 1089 ntTSL 5 BASIC14.75□□□□□ -0.05
CX3CR1P49238 DHRS4L2-207ENST00000558753 556 ntTSL 2 BASIC14.75□□□□□ -0.05
CX3CR1P49238 NOL12-207ENST00000611699 903 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
CX3CR1P49238 AC110813.1-201ENST00000507934 2209 ntTSL 2 BASIC14.75□□□□□ -0.05
CX3CR1P49238 BCAS3-204ENST00000585744 2203 ntAPPRIS ALT2 TSL 5 BASIC14.75□□□□□ -0.05
CX3CR1P49238 MCF2L2-201ENST00000328913 4980 ntAPPRIS P2 TSL 5 BASIC14.75□□□□□ -0.05
CX3CR1P49238 NAP1L4-222ENST00000620138 2479 ntTSL 2 BASIC14.75□□□□□ -0.05
CX3CR1P49238 MMP15-201ENST00000219271 4250 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
CX3CR1P49238 TPT1-AS1-215ENST00000522673 1519 ntTSL 5 BASIC14.75□□□□□ -0.05
CX3CR1P49238 USP42-201ENST00000306177 5155 ntAPPRIS P1 TSL 5 BASIC14.75□□□□□ -0.05
CX3CR1P49238 TMEM39B-201ENST00000336294 1813 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
CX3CR1P49238 COL17A1-202ENST00000369733 5488 ntAPPRIS ALT2 TSL 5 BASIC14.75□□□□□ -0.05
CX3CR1P49238 BCRP2-201ENST00000398241 1842 ntTSL 2 BASIC14.75□□□□□ -0.05
CX3CR1P49238 GCK-202ENST00000345378 2421 ntTSL 2 BASIC14.75□□□□□ -0.05
CX3CR1P49238 PI4KAP1-201ENST00000610959 2425 ntTSL 2 BASIC14.75□□□□□ -0.05
CX3CR1P49238 TMC4-209ENST00000617472 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC14.75□□□□□ -0.05
CX3CR1P49238 SREBF1-201ENST00000261646 4178 ntAPPRIS P3 TSL 1 (best) BASIC14.75□□□□□ -0.05
CX3CR1P49238 SIGLEC7-202ENST00000317643 1754 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
CX3CR1P49238 RBPJ-204ENST00000348160 1752 ntAPPRIS ALT1 TSL 1 (best) BASIC14.75□□□□□ -0.05
CX3CR1P49238 GFAP-203ENST00000435360 1779 ntTSL 2 BASIC14.75□□□□□ -0.05
CX3CR1P49238 MAPT-201ENST00000262410 6762 ntAPPRIS P4 TSL 1 (best) BASIC14.75□□□□□ -0.05
CX3CR1P49238 NIPA2-201ENST00000337451 3233 ntAPPRIS P1 TSL 5 BASIC14.75□□□□□ -0.05
CX3CR1P49238 MAN1C1-203ENST00000374332 4641 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
CX3CR1P49238 MAN1C1-208ENST00000611903 4647 ntTSL 5 BASIC14.75□□□□□ -0.05
CX3CR1P49238 SAMM50-201ENST00000350028 1717 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
CX3CR1P49238 PPP2R2B-206ENST00000453001 2569 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
CX3CR1P49238 ANKRD26-201ENST00000376087 6591 ntAPPRIS P2 TSL 5 BASIC14.75□□□□□ -0.05
CX3CR1P49238 ATG5-210ENST00000636437 2261 ntTSL 5 BASIC14.75□□□□□ -0.05
CX3CR1P49238 TBRG4-202ENST00000361278 1917 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
CX3CR1P49238 NFATC4-211ENST00000554344 2955 ntAPPRIS ALT2 TSL 1 (best) BASIC14.74□□□□□ -0.05
CX3CR1P49238 KCNMA1-251ENST00000639090 4319 ntAPPRIS ALT2 TSL 5 BASIC14.74□□□□□ -0.05
CX3CR1P49238 FOXP1-218ENST00000498215 2400 ntAPPRIS P3 TSL 2 BASIC14.74□□□□□ -0.05
CX3CR1P49238 ASAH1-231ENST00000636577 2129 ntTSL 5 BASIC14.74□□□□□ -0.05
CX3CR1P49238 TMC5-202ENST00000381414 4755 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
CX3CR1P49238 ATP6V0E2-201ENST00000421974 2605 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
CX3CR1P49238 ALDH3A1-212ENST00000494157 1572 ntTSL 3 BASIC14.74□□□□□ -0.05
CX3CR1P49238 SH3BP2-207ENST00000503393 9158 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
CX3CR1P49238 CYB5R3-204ENST00000407332 1849 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
CX3CR1P49238 RUNDC3B-203ENST00000394654 2064 ntAPPRIS P4 TSL 2 BASIC14.74□□□□□ -0.05
CX3CR1P49238 WDR45B-201ENST00000392325 2587 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
CX3CR1P49238 RSPH14-201ENST00000216036 1291 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
CX3CR1P49238 PTRHD1-201ENST00000328379 1105 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
CX3CR1P49238 HIST2H3DP1-201ENST00000401004 416 ntBASIC14.74□□□□□ -0.05
CX3CR1P49238 DHRS12-203ENST00000444610 1162 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
CX3CR1P49238 HLA-J-202ENST00000469281 1241 ntBASIC14.74□□□□□ -0.05
CX3CR1P49238 ARTN-206ENST00000472435 402 ntTSL 3 BASIC14.74□□□□□ -0.05
CX3CR1P49238 PLPP5-214ENST00000531823 875 ntTSL 3 BASIC14.74□□□□□ -0.05
CX3CR1P49238 RAD52-211ENST00000536177 1139 ntAPPRIS ALT2 TSL 2 BASIC14.74□□□□□ -0.05
CX3CR1P49238 CMC2-212ENST00000565650 671 ntAPPRIS P1 TSL 2 BASIC14.74□□□□□ -0.05
CX3CR1P49238 AC012313.10-201ENST00000623509 926 ntBASIC14.74□□□□□ -0.05
CX3CR1P49238 CEACAM3-208ENST00000630848 1110 ntAPPRIS ALT2 TSL 5 BASIC14.74□□□□□ -0.05
CX3CR1P49238 GMPPA-204ENST00000373908 1501 ntAPPRIS P1 TSL 5 BASIC14.74□□□□□ -0.05
CX3CR1P49238 PLEKHA8-205ENST00000449726 7835 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
CX3CR1P49238 FRMD5-202ENST00000417257 5011 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
CX3CR1P49238 SEPT8-208ENST00000378721 1723 ntTSL 5 BASIC14.74□□□□□ -0.05
CX3CR1P49238 DVL1-202ENST00000378891 2926 ntAPPRIS P3 TSL 1 (best) BASIC14.74□□□□□ -0.05
CX3CR1P49238 EHD3-201ENST00000322054 4636 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
CX3CR1P49238 PLPPR5-202ENST00000370188 4139 ntAPPRIS ALT1 TSL 1 (best) BASIC14.74□□□□□ -0.05
CX3CR1P49238 BRIX1-201ENST00000336767 1926 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
CX3CR1P49238 C11orf49-204ENST00000395460 1916 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
CX3CR1P49238 SURF4-208ENST00000613129 3148 ntTSL 2 BASIC14.74□□□□□ -0.05
CX3CR1P49238 ZNF707-223ENST00000532205 2865 ntAPPRIS P1 TSL 2 BASIC14.74□□□□□ -0.05
CX3CR1P49238 PTHLH-202ENST00000395868 1674 ntAPPRIS P3 TSL 1 (best) BASIC14.74□□□□□ -0.05
CX3CR1P49238 ZFP1-208ENST00000568079 1426 ntTSL 2 BASIC14.74□□□□□ -0.05
CX3CR1P49238 AC006277.1-201ENST00000624348 1610 ntBASIC14.74□□□□□ -0.05
CX3CR1P49238 TLE3-212ENST00000558201 2766 ntTSL 5 BASIC14.73□□□□□ -0.05
CX3CR1P49238 KIAA0368-201ENST00000259335 7391 ntAPPRIS P2 TSL 1 (best) BASIC14.73□□□□□ -0.05
CX3CR1P49238 SLC29A2-205ENST00000544554 2505 ntAPPRIS P1 TSL 2 BASIC14.73□□□□□ -0.05
CX3CR1P49238 TOP3BP1-201ENST00000420768 1380 ntBASIC14.73□□□□□ -0.05
CX3CR1P49238 HAGH-202ENST00000397356 2984 ntAPPRIS P3 TSL 1 (best) BASIC14.73□□□□□ -0.05
CX3CR1P49238 GCK-209ENST00000616242 2260 ntTSL 5 BASIC14.73□□□□□ -0.05
CX3CR1P49238 FBXO21-201ENST00000330622 2906 ntAPPRIS P3 TSL 1 (best) BASIC14.73□□□□□ -0.05
CX3CR1P49238 KIAA1586-201ENST00000370733 2933 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
CX3CR1P49238 AC006538.1-201ENST00000567905 1585 ntBASIC14.73□□□□□ -0.05
CX3CR1P49238 DPY19L3-206ENST00000587077 2456 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
CX3CR1P49238 NFIC-210ENST00000590282 1558 ntTSL 2 BASIC14.73□□□□□ -0.05
CX3CR1P49238 BX276092.9-201ENST00000636797 1563 ntAPPRIS ALT2 TSL 5 BASIC14.73□□□□□ -0.05
CX3CR1P49238 TRA2A-202ENST00000392502 2229 ntAPPRIS ALT2 TSL 2 BASIC14.73□□□□□ -0.05
CX3CR1P49238 ACSF3-204ENST00000406948 2247 ntAPPRIS P1 TSL 2 BASIC14.73□□□□□ -0.05
CX3CR1P49238 DDX19B-207ENST00000563206 1765 ntTSL 5 BASIC14.73□□□□□ -0.05
CX3CR1P49238 TRAPPC3-209ENST00000616395 1336 ntTSL 3 BASIC14.73□□□□□ -0.05
Retrieved 100 of 98,524 protein–RNA pairs in 27.7 ms