Protein–RNA interactions for Protein: P25391

LAMA1, Laminin subunit alpha-1, humanhuman

Predictions only

Length 3,075 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LAMA1P25391 PTGES3-202ENST00000414274 1547 ntTSL 2 BASIC16.15■□□□□ 0.18
LAMA1P25391 LCN15-201ENST00000316144 762 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
LAMA1P25391 AC022210.1-201ENST00000449856 793 ntBASIC16.15■□□□□ 0.18
LAMA1P25391 AC044860.1-202ENST00000559481 777 ntBASIC16.15■□□□□ 0.18
LAMA1P25391 RN7SL828P-201ENST00000607615 303 ntBASIC16.15■□□□□ 0.18
LAMA1P25391 MIR8072-201ENST00000614241 80 ntBASIC16.15■□□□□ 0.18
LAMA1P25391 SYNE2-228ENST00000639659 1290 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
LAMA1P25391 TRIM46-209ENST00000543729 1703 ntTSL 5 BASIC16.15■□□□□ 0.18
LAMA1P25391 TRIP10-201ENST00000313244 2153 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
LAMA1P25391 B4GALNT2-201ENST00000300404 1906 ntAPPRIS P3 TSL 1 (best) BASIC16.15■□□□□ 0.18
LAMA1P25391 GOLGA2P9-201ENST00000596977 1937 ntBASIC16.15■□□□□ 0.18
LAMA1P25391 CCDC144A-210ENST00000456009 2306 ntTSL 5 BASIC16.15■□□□□ 0.18
LAMA1P25391 GTF2IP4-202ENST00000544802 3609 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
LAMA1P25391 MOAP1-202ENST00000556883 2529 ntAPPRIS P1 TSL 2 BASIC16.15■□□□□ 0.18
LAMA1P25391 ACOX3-203ENST00000503233 2253 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
LAMA1P25391 KCNQ2-209ENST00000625514 2925 ntTSL 5 BASIC16.15■□□□□ 0.18
LAMA1P25391 ERLEC1-201ENST00000185150 2433 ntAPPRIS P3 TSL 1 (best) BASIC16.15■□□□□ 0.18
LAMA1P25391 REPS1-202ENST00000367663 2607 ntAPPRIS ALT1 TSL 5 BASIC16.15■□□□□ 0.18
LAMA1P25391 C21orf58-203ENST00000397680 2624 ntAPPRIS ALT2 TSL 2 BASIC16.15■□□□□ 0.18
LAMA1P25391 RHBDF1P1-201ENST00000427504 1941 ntBASIC16.15■□□□□ 0.18
LAMA1P25391 CDKN1A-202ENST00000373711 793 ntAPPRIS P1 TSL 5 BASIC16.15■□□□□ 0.18
LAMA1P25391 TMEM176A-202ENST00000461345 635 ntAPPRIS ALT2 TSL 5 BASIC16.15■□□□□ 0.18
LAMA1P25391 RNF216P1-213ENST00000494947 946 ntTSL 2 BASIC16.15■□□□□ 0.18
LAMA1P25391 AC011476.2-201ENST00000585492 1271 ntTSL 2 BASIC16.15■□□□□ 0.18
LAMA1P25391 AL355974.2-201ENST00000614099 556 ntTSL 4 BASIC16.15■□□□□ 0.18
LAMA1P25391 AL355974.2-202ENST00000617298 936 ntTSL 3 BASIC16.15■□□□□ 0.18
LAMA1P25391 VAC14-201ENST00000261776 3099 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
LAMA1P25391 KIAA0907-201ENST00000368319 1155 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
LAMA1P25391 HRAS-202ENST00000397594 1099 ntTSL 2 BASIC16.15■□□□□ 0.18
LAMA1P25391 SFTPC-202ENST00000437090 773 ntTSL 3 BASIC16.15■□□□□ 0.18
LAMA1P25391 AC005342.2-201ENST00000544163 315 ntTSL 3 BASIC16.15■□□□□ 0.18
LAMA1P25391 RUVBL1-201ENST00000322623 1761 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
LAMA1P25391 RBCK1-202ENST00000356286 2774 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
LAMA1P25391 TRAPPC12-201ENST00000324266 2508 ntAPPRIS P2 TSL 1 (best) BASIC16.14■□□□□ 0.18
LAMA1P25391 HLA-B-249ENST00000412585 1547 ntAPPRIS P1 BASIC16.14■□□□□ 0.17
LAMA1P25391 DTX2-206ENST00000430490 2623 ntAPPRIS P3 TSL 1 (best) BASIC16.14■□□□□ 0.17
LAMA1P25391 LRRC20-203ENST00000358141 2924 ntTSL 2 BASIC16.14■□□□□ 0.17
LAMA1P25391 FOLH1-203ENST00000343844 2258 ntTSL 2 BASIC16.14■□□□□ 0.17
LAMA1P25391 CHTOP-205ENST00000403433 1923 ntAPPRIS ALT2 TSL 5 BASIC16.14■□□□□ 0.17
LAMA1P25391 ZDHHC4-205ENST00000396713 1552 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
LAMA1P25391 Z82214.2-201ENST00000420269 531 ntTSL 4 BASIC16.14■□□□□ 0.17
LAMA1P25391 STARD13-205ENST00000439831 945 ntTSL 2 BASIC16.14■□□□□ 0.17
LAMA1P25391 TRIM50-202ENST00000453152 1599 ntAPPRIS P1 TSL 2 BASIC16.14■□□□□ 0.17
LAMA1P25391 AC008808.1-201ENST00000508923 432 ntTSL 3 BASIC16.14■□□□□ 0.17
LAMA1P25391 GZMH-203ENST00000557220 520 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
LAMA1P25391 CHRM2-201ENST00000320658 1694 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
LAMA1P25391 AC116353.5-201ENST00000638148 1699 ntBASIC16.14■□□□□ 0.17
LAMA1P25391 SCP2-201ENST00000371509 1889 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
LAMA1P25391 NFIC-203ENST00000443272 1716 ntAPPRIS P1 TSL 2 BASIC16.14■□□□□ 0.17
LAMA1P25391 WNT7B-203ENST00000410058 714 ntTSL 3 BASIC16.14■□□□□ 0.17
LAMA1P25391 SERF1A-205ENST00000507348 663 ntTSL 2 BASIC16.14■□□□□ 0.17
LAMA1P25391 AC093004.1-201ENST00000508850 424 ntBASIC16.14■□□□□ 0.17
LAMA1P25391 AL161781.2-201ENST00000509911 739 ntTSL 2 BASIC16.14■□□□□ 0.17
LAMA1P25391 LINC00461-203ENST00000504246 2300 ntTSL 2 BASIC16.14■□□□□ 0.17
LAMA1P25391 KRT8P44-201ENST00000441609 1350 ntBASIC16.14■□□□□ 0.17
LAMA1P25391 AL035456.1-201ENST00000456064 1369 ntBASIC16.14■□□□□ 0.17
LAMA1P25391 BCL2L2-PABPN1-203ENST00000557008 1366 ntAPPRIS P1 TSL 5 BASIC16.14■□□□□ 0.17
LAMA1P25391 OTUD5-204ENST00000428668 1493 ntTSL 2 BASIC16.14■□□□□ 0.17
LAMA1P25391 CDIP1-206ENST00000563507 1463 ntTSL 2 BASIC16.14■□□□□ 0.17
LAMA1P25391 KLHL22-201ENST00000328879 2616 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
LAMA1P25391 NSFL1C-202ENST00000353088 2611 ntTSL 2 BASIC16.14■□□□□ 0.17
LAMA1P25391 WT1-201ENST00000332351 3122 ntAPPRIS ALT2 TSL 1 (best) BASIC16.14■□□□□ 0.17
LAMA1P25391 GFOD2-203ENST00000602377 1991 ntTSL 4 BASIC16.14■□□□□ 0.17
LAMA1P25391 CTSB-202ENST00000353047 3875 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
LAMA1P25391 DDX42-216ENST00000583590 4148 ntAPPRIS P1 TSL 5 BASIC16.14■□□□□ 0.17
LAMA1P25391 FMR1-201ENST00000218200 4333 ntAPPRIS ALT2 TSL 1 (best) BASIC16.13■□□□□ 0.17
LAMA1P25391 LINC00595-204ENST00000434974 2692 ntTSL 2 BASIC16.13■□□□□ 0.17
LAMA1P25391 USH1C-205ENST00000527020 2159 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
LAMA1P25391 ACOT9-201ENST00000336430 1675 ntAPPRIS P3 TSL 1 (best) BASIC16.13■□□□□ 0.17
LAMA1P25391 C5orf30-201ENST00000319933 3049 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
LAMA1P25391 SEMA3B-204ENST00000433753 2755 ntAPPRIS ALT1 TSL 1 (best) BASIC16.13■□□□□ 0.17
LAMA1P25391 RGS7-203ENST00000366564 2295 ntAPPRIS ALT2 TSL 1 (best) BASIC16.13■□□□□ 0.17
LAMA1P25391 UBXN11-205ENST00000374221 1792 ntAPPRIS P4 TSL 2 BASIC16.13■□□□□ 0.17
LAMA1P25391 STRN4-201ENST00000263280 3210 ntAPPRIS P3 TSL 1 (best) BASIC16.13■□□□□ 0.17
LAMA1P25391 AC124067.4-202ENST00000522471 397 ntTSL 3 BASIC16.13■□□□□ 0.17
LAMA1P25391 LINC02298-201ENST00000546968 965 ntTSL 5 BASIC16.13■□□□□ 0.17
LAMA1P25391 KLK15-204ENST00000598239 855 ntAPPRIS P3 TSL 1 (best) BASIC16.13■□□□□ 0.17
LAMA1P25391 CREB3L2-208ENST00000620715 1053 ntTSL 5 BASIC16.13■□□□□ 0.17
LAMA1P25391 LINC01451-201ENST00000623792 534 ntBASIC16.13■□□□□ 0.17
LAMA1P25391 FAM222A-201ENST00000358906 2731 ntAPPRIS P1 TSL 5 BASIC16.13■□□□□ 0.17
LAMA1P25391 TOP3BP1-201ENST00000420768 1380 ntBASIC16.13■□□□□ 0.17
LAMA1P25391 EIF4A3-201ENST00000269349 1734 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
LAMA1P25391 PHGDH-208ENST00000641023 2096 ntAPPRIS P1 BASIC16.13■□□□□ 0.17
LAMA1P25391 IFFO1-211ENST00000615885 2775 ntTSL 5 BASIC16.13■□□□□ 0.17
LAMA1P25391 SLC39A13-213ENST00000533076 1805 ntTSL 2 BASIC16.13■□□□□ 0.17
LAMA1P25391 NOC2LP1-202ENST00000452600 2235 ntBASIC16.13■□□□□ 0.17
LAMA1P25391 B3GNT8-201ENST00000321702 1874 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
LAMA1P25391 C2orf40-201ENST00000238044 789 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
LAMA1P25391 RALY-AS1-203ENST00000440595 660 ntTSL 3 BASIC16.13■□□□□ 0.17
LAMA1P25391 AC234783.1-201ENST00000441761 496 ntBASIC16.13■□□□□ 0.17
LAMA1P25391 GALT-202ENST00000450095 1280 ntTSL 2 BASIC16.13■□□□□ 0.17
LAMA1P25391 CROCCP4-201ENST00000457096 498 ntBASIC16.13■□□□□ 0.17
LAMA1P25391 AC008770.3-202ENST00000591944 567 ntTSL 4 BASIC16.13■□□□□ 0.17
LAMA1P25391 SRD5A3P1-201ENST00000603021 949 ntBASIC16.13■□□□□ 0.17
LAMA1P25391 PLK3-201ENST00000372201 2492 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
LAMA1P25391 TTC24-201ENST00000368236 2005 ntAPPRIS P1 TSL 5 BASIC16.13■□□□□ 0.17
LAMA1P25391 AL645728.1-201ENST00000366221 2101 ntBASIC16.13■□□□□ 0.17
LAMA1P25391 EGFEM1P-202ENST00000431685 1563 ntBASIC16.13■□□□□ 0.17
LAMA1P25391 TMEM155-201ENST00000337677 2313 ntAPPRIS P2 TSL 1 (best) BASIC16.13■□□□□ 0.17
LAMA1P25391 CASP16P-202ENST00000575497 2161 ntTSL 2 BASIC16.13■□□□□ 0.17
Retrieved 100 of 98,524 protein–RNA pairs in 95.8 ms