Protein–RNA interactions for Protein: P0C0S8

HIST1H2AG, Histone H2A type 1, humanhuman

Predicted RBP Predictions only

Length 130 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HIST1H2AGP0C0S8 BCAS3-204ENST00000585744 2203 ntAPPRIS ALT2 TSL 5 BASIC16.45■□□□□ 0.22
HIST1H2AGP0C0S8 SHTN1-201ENST00000260777 5308 ntAPPRIS ALT2 TSL 2 BASIC16.45■□□□□ 0.22
HIST1H2AGP0C0S8 LRRFIP1-201ENST00000244815 4370 ntAPPRIS P3 TSL 1 (best) BASIC16.45■□□□□ 0.22
HIST1H2AGP0C0S8 PTH2-201ENST00000270631 459 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
HIST1H2AGP0C0S8 MCFD2-205ENST00000409218 648 ntAPPRIS P1 TSL 2 BASIC16.45■□□□□ 0.22
HIST1H2AGP0C0S8 ATP6V0CP3-201ENST00000417255 467 ntBASIC16.45■□□□□ 0.22
HIST1H2AGP0C0S8 ARPC4-203ENST00000433034 926 ntTSL 3 BASIC16.45■□□□□ 0.22
HIST1H2AGP0C0S8 CD99L2-206ENST00000466436 988 ntAPPRIS P4 TSL 1 (best) BASIC16.45■□□□□ 0.22
HIST1H2AGP0C0S8 AC064807.1-201ENST00000518942 816 ntTSL 3 BASIC16.45■□□□□ 0.22
HIST1H2AGP0C0S8 SFTPC-204ENST00000520605 519 ntTSL 3 BASIC16.45■□□□□ 0.22
HIST1H2AGP0C0S8 SFTPC-210ENST00000524255 681 ntTSL 2 BASIC16.45■□□□□ 0.22
HIST1H2AGP0C0S8 TRMT112-202ENST00000535126 704 ntTSL 2 BASIC16.45■□□□□ 0.22
HIST1H2AGP0C0S8 DUSP6-204ENST00000547291 1074 ntTSL 2 BASIC16.45■□□□□ 0.22
HIST1H2AGP0C0S8 AC013565.3-202ENST00000570120 460 ntTSL 2 BASIC16.45■□□□□ 0.22
HIST1H2AGP0C0S8 NAA60-217ENST00000572942 1089 ntTSL 2 BASIC16.45■□□□□ 0.22
HIST1H2AGP0C0S8 AC005412.3-201ENST00000580309 715 ntBASIC16.45■□□□□ 0.22
HIST1H2AGP0C0S8 PGPEP1-209ENST00000604499 769 ntTSL 5 BASIC16.45■□□□□ 0.22
HIST1H2AGP0C0S8 BSG-214ENST00000614867 960 ntTSL 3 BASIC16.45■□□□□ 0.22
HIST1H2AGP0C0S8 AL139011.1-202ENST00000642063 584 ntBASIC16.45■□□□□ 0.22
HIST1H2AGP0C0S8 CHRNG-201ENST00000389492 1398 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
HIST1H2AGP0C0S8 AL353732.1-201ENST00000569618 1459 ntBASIC16.45■□□□□ 0.22
HIST1H2AGP0C0S8 ESR2-205ENST00000358599 1899 ntTSL 2 BASIC16.45■□□□□ 0.22
HIST1H2AGP0C0S8 CHGA-201ENST00000216492 2063 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
HIST1H2AGP0C0S8 NFATC2-205ENST00000609507 2662 ntAPPRIS ALT2 TSL 1 (best) BASIC16.45■□□□□ 0.22
HIST1H2AGP0C0S8 LHX3-203ENST00000619587 2698 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
HIST1H2AGP0C0S8 ADAMTSL5-201ENST00000330475 2857 ntAPPRIS P1 TSL 2 BASIC16.45■□□□□ 0.22
HIST1H2AGP0C0S8 SPOP-201ENST00000347630 2965 ntAPPRIS P1 TSL 5 BASIC16.45■□□□□ 0.22
HIST1H2AGP0C0S8 JRK-209ENST00000612905 9124 ntAPPRIS P4 TSL 2 BASIC16.45■□□□□ 0.22
HIST1H2AGP0C0S8 DCLK2-201ENST00000296550 4265 ntAPPRIS P3 TSL 1 (best) BASIC16.45■□□□□ 0.22
HIST1H2AGP0C0S8 ULK3-201ENST00000440863 2623 ntAPPRIS P3 TSL 2 BASIC16.45■□□□□ 0.22
HIST1H2AGP0C0S8 AC131009.4-201ENST00000624048 1740 ntBASIC16.45■□□□□ 0.22
HIST1H2AGP0C0S8 DDX19B-204ENST00000451014 1608 ntTSL 2 BASIC16.45■□□□□ 0.22
HIST1H2AGP0C0S8 TVP23C-201ENST00000225576 1527 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
HIST1H2AGP0C0S8 C16orf89-202ENST00000472572 1444 ntAPPRIS ALT2 TSL 1 (best) BASIC16.45■□□□□ 0.22
HIST1H2AGP0C0S8 BCAT2-209ENST00000599246 1449 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
HIST1H2AGP0C0S8 LAPTM4B-201ENST00000445593 3173 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
HIST1H2AGP0C0S8 SPG7-201ENST00000268704 3076 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
HIST1H2AGP0C0S8 PEX10-201ENST00000288774 2871 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
HIST1H2AGP0C0S8 DOLPP1-202ENST00000372546 2177 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
HIST1H2AGP0C0S8 TAB1-202ENST00000331454 1660 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
HIST1H2AGP0C0S8 SH2D2A-202ENST00000368199 1658 ntAPPRIS P3 TSL 1 (best) BASIC16.44■□□□□ 0.22
HIST1H2AGP0C0S8 PKD1L2-209ENST00000531391 1488 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
HIST1H2AGP0C0S8 EWSR1-222ENST00000629659 2446 ntTSL 5 BASIC16.44■□□□□ 0.22
HIST1H2AGP0C0S8 GNE-202ENST00000396594 5298 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
HIST1H2AGP0C0S8 TFF3-201ENST00000291525 407 ntAPPRIS ALT2 TSL 5 BASIC16.44■□□□□ 0.22
HIST1H2AGP0C0S8 AQP12A-201ENST00000337801 1084 ntAPPRIS ALT2 TSL 1 (best) BASIC16.44■□□□□ 0.22
HIST1H2AGP0C0S8 SPATA22-202ENST00000355380 1216 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
HIST1H2AGP0C0S8 CD1E-209ENST00000368164 869 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
HIST1H2AGP0C0S8 SLC22A11-203ENST00000377585 2124 ntTSL 2 BASIC16.44■□□□□ 0.22
HIST1H2AGP0C0S8 RAB24-204ENST00000393611 1236 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
HIST1H2AGP0C0S8 AL133410.2-201ENST00000425499 696 ntTSL 5 BASIC16.44■□□□□ 0.22
HIST1H2AGP0C0S8 PQLC2L-205ENST00000461040 563 ntAPPRIS ALT2 TSL 3 BASIC16.44■□□□□ 0.22
HIST1H2AGP0C0S8 MRPL52-208ENST00000553711 586 ntTSL 3 BASIC16.44■□□□□ 0.22
HIST1H2AGP0C0S8 L2HGDH-206ENST00000555610 804 ntTSL 5 BASIC16.44■□□□□ 0.22
HIST1H2AGP0C0S8 GABARAP-204ENST00000571253 837 ntTSL 2 BASIC16.44■□□□□ 0.22
HIST1H2AGP0C0S8 TSPY4-205ENST00000640033 663 ntAPPRIS ALT2 TSL 5 BASIC16.44■□□□□ 0.22
HIST1H2AGP0C0S8 FSCN1-201ENST00000382361 2777 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
HIST1H2AGP0C0S8 SLC25A23-202ENST00000301454 3425 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
HIST1H2AGP0C0S8 NFASC-205ENST00000403080 2462 ntTSL 2 BASIC16.44■□□□□ 0.22
HIST1H2AGP0C0S8 ANKRD26-201ENST00000376087 6591 ntAPPRIS P2 TSL 5 BASIC16.44■□□□□ 0.22
HIST1H2AGP0C0S8 TTC8-216ENST00000614125 2377 ntTSL 5 BASIC16.44■□□□□ 0.22
HIST1H2AGP0C0S8 RNF168-201ENST00000318037 5347 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
HIST1H2AGP0C0S8 NUP50-203ENST00000407019 2059 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
HIST1H2AGP0C0S8 EDN3-202ENST00000337938 2636 ntAPPRIS P4 TSL 1 (best) BASIC16.44■□□□□ 0.22
HIST1H2AGP0C0S8 PHGDH-202ENST00000369409 1882 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
HIST1H2AGP0C0S8 HLA-A-202ENST00000376806 1854 ntBASIC16.44■□□□□ 0.22
HIST1H2AGP0C0S8 AMT-206ENST00000458307 1860 ntTSL 2 BASIC16.44■□□□□ 0.22
HIST1H2AGP0C0S8 WSCD1-210ENST00000574946 5884 ntAPPRIS P1 TSL 2 BASIC16.44■□□□□ 0.22
HIST1H2AGP0C0S8 RGS3-210ENST00000462143 2759 ntTSL 2 BASIC16.43■□□□□ 0.22
HIST1H2AGP0C0S8 PTHLH-202ENST00000395868 1674 ntAPPRIS P3 TSL 1 (best) BASIC16.43■□□□□ 0.22
HIST1H2AGP0C0S8 DCAF12L2-201ENST00000360028 2599 ntAPPRIS P1 BASIC16.43■□□□□ 0.22
HIST1H2AGP0C0S8 KIF26A-201ENST00000315264 6714 ntAPPRIS ALT2 TSL 1 (best) BASIC16.43■□□□□ 0.22
HIST1H2AGP0C0S8 AC006538.1-201ENST00000567905 1585 ntBASIC16.43■□□□□ 0.22
HIST1H2AGP0C0S8 BX276092.9-201ENST00000636797 1563 ntAPPRIS ALT2 TSL 5 BASIC16.43■□□□□ 0.22
HIST1H2AGP0C0S8 ATRNL1-201ENST00000355044 8479 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
HIST1H2AGP0C0S8 TBRG4-202ENST00000361278 1917 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
HIST1H2AGP0C0S8 TOPAZ1-201ENST00000309765 5334 ntAPPRIS P1 TSL 5 BASIC16.43■□□□□ 0.22
HIST1H2AGP0C0S8 ABCB10-201ENST00000344517 3857 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
HIST1H2AGP0C0S8 DGKE-204ENST00000572810 1843 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
HIST1H2AGP0C0S8 GPS1-226ENST00000623691 1839 ntAPPRIS ALT1 TSL 5 BASIC16.43■□□□□ 0.22
HIST1H2AGP0C0S8 ELAVL2-208ENST00000544538 3789 ntAPPRIS P3 TSL 5 BASIC16.43■□□□□ 0.22
HIST1H2AGP0C0S8 CALB2-202ENST00000349553 1373 ntTSL 5 BASIC16.43■□□□□ 0.22
HIST1H2AGP0C0S8 FOXP3-206ENST00000557224 1371 ntTSL 2 BASIC16.43■□□□□ 0.22
HIST1H2AGP0C0S8 FBLIM1-202ENST00000375766 3695 ntAPPRIS P1 TSL 2 BASIC16.43■□□□□ 0.22
HIST1H2AGP0C0S8 LINC00323-202ENST00000441268 2095 ntTSL 2 BASIC16.43■□□□□ 0.22
HIST1H2AGP0C0S8 MCF2L2-201ENST00000328913 4980 ntAPPRIS P2 TSL 5 BASIC16.43■□□□□ 0.22
HIST1H2AGP0C0S8 CCDC74A-202ENST00000409856 1298 ntAPPRIS ALT2 TSL 1 (best) BASIC16.43■□□□□ 0.22
HIST1H2AGP0C0S8 NDUFB2-209ENST00000472695 503 ntTSL 5 BASIC16.43■□□□□ 0.22
HIST1H2AGP0C0S8 SMN1-203ENST00000503079 1219 ntTSL 5 BASIC16.43■□□□□ 0.22
HIST1H2AGP0C0S8 TMEM135-209ENST00000532959 1149 ntTSL 2 BASIC16.43■□□□□ 0.22
HIST1H2AGP0C0S8 RIN3-211ENST00000557762 517 ntTSL 3 BASIC16.43■□□□□ 0.22
HIST1H2AGP0C0S8 AC011247.3-202ENST00000605062 570 ntTSL 4 BASIC16.43■□□□□ 0.22
HIST1H2AGP0C0S8 SLC26A1-205ENST00000622731 1057 ntTSL 5 BASIC16.43■□□□□ 0.22
HIST1H2AGP0C0S8 AC004790.2-201ENST00000623588 572 ntBASIC16.43■□□□□ 0.22
HIST1H2AGP0C0S8 AC244517.11-201ENST00000624192 573 ntTSL 5 BASIC16.43■□□□□ 0.22
HIST1H2AGP0C0S8 AC117500.6-201ENST00000624871 588 ntBASIC16.43■□□□□ 0.22
HIST1H2AGP0C0S8 LIN28B-AS1-205ENST00000637414 879 ntTSL 5 BASIC16.43■□□□□ 0.22
HIST1H2AGP0C0S8 AL118508.1-201ENST00000613502 2345 ntBASIC16.43■□□□□ 0.22
HIST1H2AGP0C0S8 C4A-243ENST00000428956 5460 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
HIST1H2AGP0C0S8 C4B-202ENST00000435363 5460 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Retrieved 100 of 98,524 protein–RNA pairs in 67.7 ms