Protein–RNA interactions for Protein: O94822

LTN1, E3 ubiquitin-protein ligase listerin, humanhuman

Predictions only

Length 1,766 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LTN1O94822 CPT2-208ENST00000636891 2746 ntTSL 5 BASIC21.84■■□□□ 1.09
LTN1O94822 CPT2-210ENST00000637252 2739 ntTSL 5 BASIC21.84■■□□□ 1.09
LTN1O94822 ZNF131-206ENST00000505606 3209 ntAPPRIS P1 TSL 5 BASIC21.84■■□□□ 1.09
LTN1O94822 ZNF500-202ENST00000545009 2440 ntTSL 2 BASIC21.84■■□□□ 1.09
LTN1O94822 NCAPH2-202ENST00000395698 1388 ntTSL 1 (best) BASIC21.84■■□□□ 1.09
LTN1O94822 ALOX15B-205ENST00000573359 1809 ntTSL 1 (best) BASIC21.84■■□□□ 1.09
LTN1O94822 NGLY1-207ENST00000428257 2534 ntTSL 1 (best) BASIC21.84■■□□□ 1.09
LTN1O94822 SLC18B1-202ENST00000367918 472 ntTSL 5 BASIC21.84■■□□□ 1.09
LTN1O94822 ZDHHC12-201ENST00000372663 1129 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
LTN1O94822 AL133456.1-201ENST00000415655 577 ntTSL 4 BASIC21.84■■□□□ 1.09
LTN1O94822 RAD18-204ENST00000418463 563 ntTSL 4 BASIC21.84■■□□□ 1.09
LTN1O94822 RAD18-205ENST00000421052 582 ntTSL 3 BASIC21.84■■□□□ 1.09
LTN1O94822 AC105940.2-201ENST00000421055 380 ntTSL 3 BASIC21.84■■□□□ 1.09
LTN1O94822 DOC2GP-202ENST00000514950 1163 ntBASIC21.84■■□□□ 1.09
LTN1O94822 NDUFS7-218ENST00000618074 688 ntTSL 5 BASIC21.84■■□□□ 1.09
LTN1O94822 NDUFS7-219ENST00000620479 754 ntTSL 5 BASIC21.84■■□□□ 1.09
LTN1O94822 ACSS3-201ENST00000261206 2666 ntAPPRIS ALT1 TSL 1 (best) BASIC21.84■■□□□ 1.09
LTN1O94822 BCAS3-204ENST00000585744 2203 ntAPPRIS ALT2 TSL 5 BASIC21.84■■□□□ 1.09
LTN1O94822 RABEPK-206ENST00000628863 1537 ntTSL 5 BASIC21.84■■□□□ 1.09
LTN1O94822 NFASC-205ENST00000403080 2462 ntTSL 2 BASIC21.84■■□□□ 1.09
LTN1O94822 PNPO-201ENST00000225573 2256 ntTSL 1 (best) BASIC21.84■■□□□ 1.09
LTN1O94822 AL583722.1-201ENST00000540171 1307 ntTSL 1 (best) BASIC21.84■■□□□ 1.09
LTN1O94822 PLEKHA8P1-201ENST00000256692 1839 ntTSL 1 (best) BASIC21.83■■□□□ 1.09
LTN1O94822 CT62-201ENST00000449977 1825 ntAPPRIS P2 TSL 1 (best) BASIC21.83■■□□□ 1.09
LTN1O94822 GSKIP-201ENST00000438650 2140 ntAPPRIS P1 TSL 2 BASIC21.83■■□□□ 1.09
LTN1O94822 REPIN1-203ENST00000444957 2969 ntAPPRIS P3 TSL 1 (best) BASIC21.83■■□□□ 1.09
LTN1O94822 RAB40C-203ENST00000535977 2717 ntAPPRIS P1 TSL 5 BASIC21.83■■□□□ 1.09
LTN1O94822 GABARAPL1-205ENST00000539170 1700 ntTSL 3 BASIC21.83■■□□□ 1.09
LTN1O94822 TONSL-203ENST00000613741 1713 ntTSL 5 BASIC21.83■■□□□ 1.09
LTN1O94822 CCDC28A-201ENST00000332797 1496 ntTSL 1 (best) BASIC21.83■■□□□ 1.09
LTN1O94822 ABCB9-207ENST00000442833 2587 ntTSL 1 (best) BASIC21.83■■□□□ 1.09
LTN1O94822 CORO6-210ENST00000580212 2345 ntTSL 5 BASIC21.83■■□□□ 1.09
LTN1O94822 IFNL3-201ENST00000413851 656 ntAPPRIS P2 TSL 1 (best) BASIC21.83■■□□□ 1.09
LTN1O94822 ZSCAN2-213ENST00000541040 965 ntTSL 1 (best) BASIC21.83■■□□□ 1.09
LTN1O94822 APOC4-201ENST00000591600 348 ntTSL 3 BASIC21.83■■□□□ 1.09
LTN1O94822 DUSP14-204ENST00000613659 1559 ntAPPRIS P1 TSL 2 BASIC21.83■■□□□ 1.09
LTN1O94822 GALE-216ENST00000617979 1566 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.09
LTN1O94822 BPIFB4-201ENST00000375483 2159 ntAPPRIS P1 TSL 5 BASIC21.83■■□□□ 1.08
LTN1O94822 PTGES3-201ENST00000262033 1920 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.08
LTN1O94822 CALM3-212ENST00000599839 1355 ntTSL 1 (best) BASIC21.83■■□□□ 1.08
LTN1O94822 STRN3-202ENST00000357479 2799 ntAPPRIS P1 TSL 5 BASIC21.83■■□□□ 1.08
LTN1O94822 PIF1-201ENST00000268043 2687 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
LTN1O94822 HRCT1-201ENST00000354323 950 ntAPPRIS P1 BASIC21.82■■□□□ 1.08
LTN1O94822 CD81-207ENST00000481687 890 ntTSL 2 BASIC21.82■■□□□ 1.08
LTN1O94822 AL359881.2-201ENST00000602973 570 ntBASIC21.82■■□□□ 1.08
LTN1O94822 AC244517.11-204ENST00000624424 760 ntTSL 5 BASIC21.82■■□□□ 1.08
LTN1O94822 MTHFD2L-203ENST00000395759 2354 ntAPPRIS P2 TSL 5 BASIC21.82■■□□□ 1.08
LTN1O94822 AL391256.1-201ENST00000443260 1855 ntBASIC21.82■■□□□ 1.08
LTN1O94822 GFY-201ENST00000576655 1876 ntAPPRIS P1 TSL 5 BASIC21.82■■□□□ 1.08
LTN1O94822 AC139713.2-201ENST00000641328 2723 ntBASIC21.82■■□□□ 1.08
LTN1O94822 MIER1-204ENST00000371012 2420 ntTSL 2 BASIC21.82■■□□□ 1.08
LTN1O94822 ZMAT3-203ENST00000432729 2944 ntAPPRIS ALT1 TSL 2 BASIC21.82■■□□□ 1.08
LTN1O94822 TESMIN-201ENST00000255087 2579 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
LTN1O94822 AL136982.4-201ENST00000437689 1740 ntBASIC21.82■■□□□ 1.08
LTN1O94822 TMED3-203ENST00000536821 2265 ntTSL 2 BASIC21.82■■□□□ 1.08
LTN1O94822 H1FOO-201ENST00000324382 1067 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
LTN1O94822 AL034550.1-201ENST00000442179 986 ntTSL 1 (best) BASIC21.82■■□□□ 1.08
LTN1O94822 SLC30A2-202ENST00000374278 3097 ntTSL 1 (best) BASIC21.81■■□□□ 1.08
LTN1O94822 FDPS-201ENST00000356657 1478 ntAPPRIS P3 TSL 1 (best) BASIC21.81■■□□□ 1.08
LTN1O94822 HDHD3-202ENST00000374180 1497 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
LTN1O94822 PILRB-208ENST00000452089 2099 ntAPPRIS P2 TSL 2 BASIC21.81■■□□□ 1.08
LTN1O94822 GFOD2-201ENST00000268797 2126 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
LTN1O94822 LRRTM1-202ENST00000409148 2126 ntAPPRIS P1 TSL 4 BASIC21.81■■□□□ 1.08
LTN1O94822 KLC1-202ENST00000334553 2524 ntTSL 5 BASIC21.81■■□□□ 1.08
LTN1O94822 DPF2-205ENST00000528416 2799 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
LTN1O94822 HCRTR1-203ENST00000403528 2003 ntAPPRIS P1 TSL 5 BASIC21.81■■□□□ 1.08
LTN1O94822 SPAG7-201ENST00000206020 1058 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
LTN1O94822 SPDYE17-201ENST00000412399 783 ntBASIC21.81■■□□□ 1.08
LTN1O94822 EEF1DP4-201ENST00000446006 880 ntBASIC21.81■■□□□ 1.08
LTN1O94822 SSBP1-214ENST00000498107 636 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
LTN1O94822 AP001995.1-201ENST00000531784 1157 ntTSL 4 BASIC21.81■■□□□ 1.08
LTN1O94822 AC090164.4-201ENST00000632451 313 ntTSL 5 BASIC21.81■■□□□ 1.08
LTN1O94822 ACOX3-203ENST00000503233 2253 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
LTN1O94822 AC007613.1-201ENST00000572811 2597 ntBASIC21.81■■□□□ 1.08
LTN1O94822 GLIPR2-205ENST00000619700 1645 ntTSL 3 BASIC21.81■■□□□ 1.08
LTN1O94822 CCDC3-201ENST00000378825 2731 ntAPPRIS P3 TSL 1 (best) BASIC21.81■■□□□ 1.08
LTN1O94822 CXCL6-201ENST00000226317 1718 ntAPPRIS P2 TSL 1 (best) BASIC21.81■■□□□ 1.08
LTN1O94822 AAED1-201ENST00000375234 2863 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
LTN1O94822 AFG3L1P-203ENST00000418696 2965 ntTSL 2 BASIC21.8■■□□□ 1.08
LTN1O94822 CLDN5-202ENST00000406028 2548 ntTSL 2 BASIC21.8■■□□□ 1.08
LTN1O94822 AC112492.5-201ENST00000421897 457 ntBASIC21.8■■□□□ 1.08
LTN1O94822 HSPB7-207ENST00000487046 844 ntAPPRIS ALT1 TSL 1 (best) BASIC21.8■■□□□ 1.08
LTN1O94822 USP32P1-208ENST00000506594 1164 ntBASIC21.8■■□□□ 1.08
LTN1O94822 AC129507.3-201ENST00000571512 913 ntTSL 2 BASIC21.8■■□□□ 1.08
LTN1O94822 KLK15-203ENST00000596931 692 ntTSL 1 (best) BASIC21.8■■□□□ 1.08
LTN1O94822 KLK15-204ENST00000598239 855 ntAPPRIS P3 TSL 1 (best) BASIC21.8■■□□□ 1.08
LTN1O94822 AC026979.3-201ENST00000607315 403 ntBASIC21.8■■□□□ 1.08
LTN1O94822 PTOV1-219ENST00000601638 1413 ntTSL 5 BASIC21.8■■□□□ 1.08
LTN1O94822 CYP4F24P-201ENST00000586049 1580 ntBASIC21.8■■□□□ 1.08
LTN1O94822 GGT3P-204ENST00000453783 1664 ntBASIC21.8■■□□□ 1.08
LTN1O94822 UBL7-209ENST00000567435 1720 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
LTN1O94822 PPIF-201ENST00000225174 2190 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
LTN1O94822 VEZF1-202ENST00000581208 2321 ntAPPRIS P3 TSL 1 (best) BASIC21.8■■□□□ 1.08
LTN1O94822 RCAN3-205ENST00000436717 2574 ntTSL 3 BASIC21.8■■□□□ 1.08
LTN1O94822 CD99P1-204ENST00000435581 2788 ntTSL 2 BASIC21.8■■□□□ 1.08
LTN1O94822 RNF38-204ENST00000357058 5254 ntAPPRIS P1 TSL 5 BASIC21.8■■□□□ 1.08
LTN1O94822 SLC2A6-202ENST00000371899 2528 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
LTN1O94822 AL139300.1-201ENST00000472726 2505 ntAPPRIS P1 TSL 2 BASIC21.8■■□□□ 1.08
LTN1O94822 WNT5B-202ENST00000397196 2303 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
LTN1O94822 TBC1D10A-203ENST00000403362 1833 ntAPPRIS ALT2 TSL 5 BASIC21.79■■□□□ 1.08
Retrieved 100 of 98,524 protein–RNA pairs in 45.7 ms