Protein–RNA interactions for Protein: O60488

ACSL4, Long-chain-fatty-acid--CoA ligase 4, humanhuman

Predictions only

Length 711 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ACSL4O60488 CROCC2-201ENST00000443866 5382 ntAPPRIS P1 TSL 5 BASIC17.2■□□□□ 0.34
ACSL4O60488 ITGB7-202ENST00000422257 2791 ntAPPRIS P1 TSL 5 BASIC17.2■□□□□ 0.34
ACSL4O60488 TINF2-208ENST00000558566 1874 ntAPPRIS ALT2 TSL 2 BASIC17.2■□□□□ 0.34
ACSL4O60488 PHKG1-205ENST00000452681 2226 ntTSL 2 BASIC17.2■□□□□ 0.34
ACSL4O60488 GJB3-201ENST00000373362 1797 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
ACSL4O60488 ZDHHC4-206ENST00000405731 1348 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
ACSL4O60488 TRAPPC3-210ENST00000617904 1305 ntTSL 2 BASIC17.2■□□□□ 0.34
ACSL4O60488 GNRHR2-201ENST00000312753 1599 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
ACSL4O60488 NDUFV1-201ENST00000322776 1596 ntAPPRIS P3 TSL 1 (best) BASIC17.19■□□□□ 0.34
ACSL4O60488 HYAL3-201ENST00000336307 1942 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
ACSL4O60488 SPIDR-227ENST00000541342 3311 ntAPPRIS ALT2 TSL 2 BASIC17.19■□□□□ 0.34
ACSL4O60488 AL603756.1-201ENST00000606511 2163 ntBASIC17.19■□□□□ 0.34
ACSL4O60488 ATG2A-203ENST00000421419 1481 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
ACSL4O60488 USP13-201ENST00000263966 8323 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
ACSL4O60488 SH3BP4-202ENST00000392011 5194 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
ACSL4O60488 MARVELD3-204ENST00000565261 1351 ntAPPRIS ALT2 TSL 1 (best) BASIC17.19■□□□□ 0.34
ACSL4O60488 ISM1-201ENST00000262487 2593 ntAPPRIS P1 TSL 5 BASIC17.19■□□□□ 0.34
ACSL4O60488 ZNF74-202ENST00000400451 3159 ntAPPRIS P2 TSL 1 (best) BASIC17.19■□□□□ 0.34
ACSL4O60488 PDS5A-201ENST00000303538 7176 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
ACSL4O60488 CD37-201ENST00000323906 1265 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
ACSL4O60488 CYB5A-203ENST00000397914 619 ntTSL 3 BASIC17.19■□□□□ 0.34
ACSL4O60488 AL109613.1-202ENST00000427243 639 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
ACSL4O60488 AL592309.1-201ENST00000443127 649 ntBASIC17.19■□□□□ 0.34
ACSL4O60488 RPS27L-204ENST00000455271 923 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
ACSL4O60488 AC090515.4-201ENST00000558042 450 ntTSL 3 BASIC17.19■□□□□ 0.34
ACSL4O60488 AC009053.3-201ENST00000567148 574 ntTSL 4 BASIC17.19■□□□□ 0.34
ACSL4O60488 AC027612.4-201ENST00000605371 583 ntBASIC17.19■□□□□ 0.34
ACSL4O60488 SBK3-202ENST00000612221 1270 ntAPPRIS P1 TSL 5 BASIC17.19■□□□□ 0.34
ACSL4O60488 AC087645.4-201ENST00000638890 792 ntTSL 5 BASIC17.19■□□□□ 0.34
ACSL4O60488 CCDC28A-202ENST00000611852 1505 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
ACSL4O60488 STK32C-204ENST00000368622 2010 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
ACSL4O60488 HOOK2-202ENST00000397668 2513 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
ACSL4O60488 CACNA1I-201ENST00000401624 6740 ntAPPRIS ALT2 TSL 1 (best) BASIC17.19■□□□□ 0.34
ACSL4O60488 PSMC3IP-202ENST00000393795 1416 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
ACSL4O60488 CCNA1-203ENST00000625767 1699 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
ACSL4O60488 AATK-201ENST00000326724 5257 ntAPPRIS P3 TSL 5 BASIC17.19■□□□□ 0.34
ACSL4O60488 SP3-203ENST00000418194 3937 ntAPPRIS ALT2 TSL 1 (best) BASIC17.19■□□□□ 0.34
ACSL4O60488 SLC39A1-211ENST00000621013 2322 ntAPPRIS P1 TSL 2 BASIC17.19■□□□□ 0.34
ACSL4O60488 SDCBP-202ENST00000413219 2086 ntAPPRIS P3 TSL 2 BASIC17.19■□□□□ 0.34
ACSL4O60488 RGS12-203ENST00000344733 5469 ntAPPRIS P4 TSL 1 (best) BASIC17.19■□□□□ 0.34
ACSL4O60488 MIER1-206ENST00000371016 1802 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
ACSL4O60488 CERCAM-213ENST00000612334 1554 ntAPPRIS ALT2 TSL 5 BASIC17.19■□□□□ 0.34
ACSL4O60488 CFC1B-202ENST00000619050 1554 ntTSL 5 BASIC17.19■□□□□ 0.34
ACSL4O60488 BX276092.9-201ENST00000636797 1563 ntAPPRIS ALT2 TSL 5 BASIC17.19■□□□□ 0.34
ACSL4O60488 PTPRC-206ENST00000413409 1338 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
ACSL4O60488 GIT1-203ENST00000394869 3711 ntAPPRIS ALT2 TSL 1 (best) BASIC17.19■□□□□ 0.34
ACSL4O60488 GALNT11-205ENST00000430044 2727 ntAPPRIS P1 TSL 5 BASIC17.19■□□□□ 0.34
ACSL4O60488 PON2-201ENST00000222572 1745 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
ACSL4O60488 EIF4H-201ENST00000265753 2679 ntAPPRIS P4 TSL 2 BASIC17.18■□□□□ 0.34
ACSL4O60488 VHL-202ENST00000345392 2696 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
ACSL4O60488 AC080080.1-201ENST00000625121 2420 ntBASIC17.18■□□□□ 0.34
ACSL4O60488 GGNBP2-212ENST00000613102 2847 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
ACSL4O60488 LBX1-AS1-201ENST00000430651 2553 ntTSL 2 BASIC17.18■□□□□ 0.34
ACSL4O60488 C9orf62-201ENST00000623103 1924 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
ACSL4O60488 ALKBH6-201ENST00000252984 955 ntAPPRIS ALT2 TSL 1 (best) BASIC17.18■□□□□ 0.34
ACSL4O60488 TMEM179B-201ENST00000333449 1023 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
ACSL4O60488 SPCS2P4-201ENST00000436160 681 ntBASIC17.18■□□□□ 0.34
ACSL4O60488 AC002116.1-201ENST00000473572 1130 ntTSL 2 BASIC17.18■□□□□ 0.34
ACSL4O60488 KRT18P34-201ENST00000488218 1270 ntBASIC17.18■□□□□ 0.34
ACSL4O60488 SERF1A-207ENST00000512649 846 ntTSL 2 BASIC17.18■□□□□ 0.34
ACSL4O60488 TLK2-203ENST00000346027 3449 ntAPPRIS P3 TSL 1 (best) BASIC17.18■□□□□ 0.34
ACSL4O60488 EPN2-203ENST00000395618 2216 ntTSL 2 BASIC17.18■□□□□ 0.34
ACSL4O60488 DNAJB2-201ENST00000336576 3176 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
ACSL4O60488 DYRK1B-205ENST00000597639 1806 ntTSL 5 BASIC17.18■□□□□ 0.34
ACSL4O60488 AMMECR1-201ENST00000262844 5504 ntAPPRIS P3 TSL 1 (best) BASIC17.18■□□□□ 0.34
ACSL4O60488 AL139300.1-201ENST00000472726 2505 ntAPPRIS P1 TSL 2 BASIC17.18■□□□□ 0.34
ACSL4O60488 CCDC90B-202ENST00000455220 1550 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
ACSL4O60488 AL512652.2-201ENST00000625156 1716 ntBASIC17.18■□□□□ 0.34
ACSL4O60488 DHRS1-201ENST00000288111 1480 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
ACSL4O60488 ARHGAP9-204ENST00000430041 2323 ntAPPRIS ALT2 TSL 1 (best) BASIC17.18■□□□□ 0.34
ACSL4O60488 FAM109A-204ENST00000548163 2317 ntAPPRIS P3 TSL 2 BASIC17.18■□□□□ 0.34
ACSL4O60488 C6orf47-202ENST00000375911 2475 ntAPPRIS P1 BASIC17.18■□□□□ 0.34
ACSL4O60488 GPAT3-202ENST00000395226 2631 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
ACSL4O60488 SKOR1-203ENST00000554054 3620 ntAPPRIS ALT2 TSL 5 BASIC17.17■□□□□ 0.34
ACSL4O60488 AC010478.1-202ENST00000559112 2367 ntTSL 2 BASIC17.17■□□□□ 0.34
ACSL4O60488 CRTC3-201ENST00000268184 2537 ntAPPRIS P3 TSL 1 (best) BASIC17.17■□□□□ 0.34
ACSL4O60488 ITGA9-201ENST00000264741 7889 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
ACSL4O60488 GRAMD1B-214ENST00000635736 2814 ntAPPRIS P1 TSL 5 BASIC17.17■□□□□ 0.34
ACSL4O60488 HLA-B-249ENST00000412585 1547 ntAPPRIS P1 BASIC17.17■□□□□ 0.34
ACSL4O60488 BRPF1-201ENST00000383829 4736 ntAPPRIS ALT1 TSL 1 (best) BASIC17.17■□□□□ 0.34
ACSL4O60488 ATP5S-201ENST00000245448 1671 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
ACSL4O60488 NSMF-204ENST00000371473 3556 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
ACSL4O60488 TMEM25-202ENST00000354064 1965 ntTSL 2 BASIC17.17■□□□□ 0.34
ACSL4O60488 CDKN1A-204ENST00000448526 2104 ntAPPRIS P1 TSL 3 BASIC17.17■□□□□ 0.34
ACSL4O60488 DDX1-207ENST00000617198 2257 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
ACSL4O60488 VWA1-203ENST00000476993 4511 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
ACSL4O60488 CTRB2-201ENST00000303037 901 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
ACSL4O60488 GGT7-201ENST00000336431 2642 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
ACSL4O60488 PODNL1-202ENST00000339560 2165 ntAPPRIS P3 TSL 1 (best) BASIC17.17■□□□□ 0.34
ACSL4O60488 ITGB2-204ENST00000397846 422 ntTSL 2 BASIC17.17■□□□□ 0.34
ACSL4O60488 AIFM3-201ENST00000399163 2309 ntAPPRIS ALT1 TSL 1 (best) BASIC17.17■□□□□ 0.34
ACSL4O60488 ZGLP1-202ENST00000403903 2303 ntAPPRIS P2 TSL 1 (best) BASIC17.17■□□□□ 0.34
ACSL4O60488 ADIRF-AS1-201ENST00000418273 2627 ntTSL 3 BASIC17.17■□□□□ 0.34
ACSL4O60488 AC005237.2-201ENST00000434368 219 ntBASIC17.17■□□□□ 0.34
ACSL4O60488 AMT-206ENST00000458307 1860 ntTSL 2 BASIC17.17■□□□□ 0.34
ACSL4O60488 AC019257.1-202ENST00000521498 445 ntTSL 5 BASIC17.17■□□□□ 0.34
ACSL4O60488 LINC02055-207ENST00000524346 706 ntTSL 3 BASIC17.17■□□□□ 0.34
ACSL4O60488 CDK2-204ENST00000553376 1725 ntTSL 5 BASIC17.17■□□□□ 0.34
ACSL4O60488 RNF34-208ENST00000555076 593 ntTSL 3 BASIC17.17■□□□□ 0.34
ACSL4O60488 RPS15-207ENST00000591032 550 ntTSL 3 BASIC17.17■□□□□ 0.34
Retrieved 100 of 98,524 protein–RNA pairs in 41.8 ms