Protein–RNA interactions for Protein: O43909

EXTL3, Exostosin-like 3, humanhuman

Predictions only

Length 919 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EXTL3O43909 AC087645.4-201ENST00000638890 792 ntTSL 5 BASIC18.13■□□□□ 0.49
EXTL3O43909 SLC52A1-201ENST00000254853 2377 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
EXTL3O43909 PPP3CA-201ENST00000323055 4519 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
EXTL3O43909 HRAT92-201ENST00000452622 3506 ntTSL 2 BASIC18.13■□□□□ 0.49
EXTL3O43909 ABLIM2-202ENST00000361581 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC18.13■□□□□ 0.49
EXTL3O43909 ICAM4-203ENST00000393717 1390 ntAPPRIS ALT2 TSL 2 BASIC18.13■□□□□ 0.49
EXTL3O43909 CBWD2-204ENST00000433343 1411 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
EXTL3O43909 LYPD5-203ENST00000594013 1519 ntAPPRIS P3 TSL 2 BASIC18.13■□□□□ 0.49
EXTL3O43909 AL512625.3-203ENST00000445604 1602 ntTSL 5 BASIC18.12■□□□□ 0.49
EXTL3O43909 CDC25B-204ENST00000379598 2990 ntTSL 2 BASIC18.12■□□□□ 0.49
EXTL3O43909 IRF5-215ENST00000619830 1652 ntTSL 2 BASIC18.12■□□□□ 0.49
EXTL3O43909 CCDC120-203ENST00000536628 2381 ntAPPRIS ALT2 TSL 2 BASIC18.12■□□□□ 0.49
EXTL3O43909 GGT4P-201ENST00000623672 1708 ntBASIC18.12■□□□□ 0.49
EXTL3O43909 SDR16C5-201ENST00000303749 1840 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
EXTL3O43909 NPM2-203ENST00000397940 1874 ntAPPRIS P2 TSL 2 BASIC18.12■□□□□ 0.49
EXTL3O43909 AC092171.3-201ENST00000610122 2651 ntBASIC18.12■□□□□ 0.49
EXTL3O43909 MAP4K4-202ENST00000324219 7526 ntTSL 5 BASIC18.12■□□□□ 0.49
EXTL3O43909 SPATC1-201ENST00000377470 2007 ntAPPRIS P3 TSL 1 (best) BASIC18.12■□□□□ 0.49
EXTL3O43909 REPS2-201ENST00000303843 7771 ntAPPRIS ALT2 TSL 1 (best) BASIC18.12■□□□□ 0.49
EXTL3O43909 KLHDC8A-205ENST00000539253 2931 ntAPPRIS P1 TSL 5 BASIC18.12■□□□□ 0.49
EXTL3O43909 TMEM147-201ENST00000222284 899 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
EXTL3O43909 NEK7-201ENST00000367383 586 ntTSL 2 BASIC18.12■□□□□ 0.49
EXTL3O43909 TCEAL3-203ENST00000372628 1221 ntAPPRIS P1 TSL 5 BASIC18.12■□□□□ 0.49
EXTL3O43909 HIST1H2BD-202ENST00000377777 496 ntAPPRIS P1 BASIC18.12■□□□□ 0.49
EXTL3O43909 HCCS-203ENST00000380763 1000 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
EXTL3O43909 SUMO1-201ENST00000392244 831 ntTSL 2 BASIC18.12■□□□□ 0.49
EXTL3O43909 SUMO1-209ENST00000409712 761 ntTSL 2 BASIC18.12■□□□□ 0.49
EXTL3O43909 PMS2P2-201ENST00000425039 1128 ntBASIC18.12■□□□□ 0.49
EXTL3O43909 FAM58CP-201ENST00000435741 640 ntBASIC18.12■□□□□ 0.49
EXTL3O43909 MRPL20-203ENST00000482352 1049 ntTSL 2 BASIC18.12■□□□□ 0.49
EXTL3O43909 HILS1-201ENST00000504307 1219 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
EXTL3O43909 SNCA-209ENST00000506244 570 ntAPPRIS P1 TSL 2 BASIC18.12■□□□□ 0.49
EXTL3O43909 C8orf46-213ENST00000521495 557 ntTSL 4 BASIC18.12■□□□□ 0.49
EXTL3O43909 AC027117.2-201ENST00000522768 510 ntTSL 3 BASIC18.12■□□□□ 0.49
EXTL3O43909 PMF1-BGLAP-204ENST00000567140 655 ntTSL 3 BASIC18.12■□□□□ 0.49
EXTL3O43909 MIR3687-2-201ENST00000577708 61 ntBASIC18.12■□□□□ 0.49
EXTL3O43909 AL355385.1-201ENST00000606123 409 ntBASIC18.12■□□□□ 0.49
EXTL3O43909 MIR3687-1-201ENST00000614492 61 ntBASIC18.12■□□□□ 0.49
EXTL3O43909 SLC5A2-201ENST00000330498 2271 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
EXTL3O43909 SIRT6-214ENST00000601488 1361 ntTSL 3 BASIC18.12■□□□□ 0.49
EXTL3O43909 BSCL2-210ENST00000421906 1440 ntAPPRIS P3 TSL 5 BASIC18.12■□□□□ 0.49
EXTL3O43909 TRPC6-202ENST00000348423 2448 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
EXTL3O43909 TRAK1-209ENST00000487159 5536 ntAPPRIS ALT2 TSL 5 BASIC18.12■□□□□ 0.49
EXTL3O43909 CA12-203ENST00000422263 2556 ntTSL 2 BASIC18.12■□□□□ 0.49
EXTL3O43909 CHCHD3-201ENST00000262570 1598 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
EXTL3O43909 FUT2-201ENST00000391876 1593 ntAPPRIS P1 TSL 2 BASIC18.12■□□□□ 0.49
EXTL3O43909 PDXP-202ENST00000403251 1571 ntTSL 2 BASIC18.12■□□□□ 0.49
EXTL3O43909 FBXO4-201ENST00000281623 1682 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
EXTL3O43909 IGHM-202ENST00000637539 1683 ntAPPRIS P5 BASIC18.12■□□□□ 0.49
EXTL3O43909 PAK4-203ENST00000360442 2855 ntAPPRIS P1 TSL 5 BASIC18.12■□□□□ 0.49
EXTL3O43909 FAM49B-202ENST00000517654 1817 ntAPPRIS P1 TSL 5 BASIC18.12■□□□□ 0.49
EXTL3O43909 PACSIN2-205ENST00000407585 3080 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
EXTL3O43909 CHTOP-203ENST00000368690 2165 ntAPPRIS ALT1 TSL 1 (best) BASIC18.11■□□□□ 0.49
EXTL3O43909 SPAST-202ENST00000345662 5116 ntAPPRIS ALT1 TSL 1 (best) BASIC18.11■□□□□ 0.49
EXTL3O43909 GOLGA2-213ENST00000610329 2212 ntTSL 2 BASIC18.11■□□□□ 0.49
EXTL3O43909 TOM1-210ENST00000449058 2389 ntAPPRIS P3 TSL 1 (best) BASIC18.11■□□□□ 0.49
EXTL3O43909 JMJD4-206ENST00000615711 2591 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
EXTL3O43909 PDE3B-201ENST00000282096 6076 ntAPPRIS P2 TSL 1 (best) BASIC18.11■□□□□ 0.49
EXTL3O43909 SLC22A3-201ENST00000275300 3348 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
EXTL3O43909 SWAP70-202ENST00000447399 3538 ntTSL 2 BASIC18.11■□□□□ 0.49
EXTL3O43909 NRBP2-202ENST00000442628 3587 ntAPPRIS P1 TSL 2 BASIC18.11■□□□□ 0.49
EXTL3O43909 PNRC2-202ENST00000374468 814 ntAPPRIS P1 TSL 2 BASIC18.11■□□□□ 0.49
EXTL3O43909 MRPS12-203ENST00000407800 1220 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
EXTL3O43909 DANCR-201ENST00000411630 904 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
EXTL3O43909 AC006042.2-201ENST00000428660 568 ntTSL 4 BASIC18.11■□□□□ 0.49
EXTL3O43909 ZNF295-AS1-202ENST00000429739 783 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
EXTL3O43909 AL160408.2-201ENST00000436039 693 ntTSL 3 BASIC18.11■□□□□ 0.49
EXTL3O43909 TTC31-205ENST00000442235 958 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
EXTL3O43909 AL049569.1-201ENST00000446261 636 ntTSL 3 BASIC18.11■□□□□ 0.49
EXTL3O43909 RPS27L-204ENST00000455271 923 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
EXTL3O43909 PP7080-203ENST00000510604 859 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
EXTL3O43909 AP000777.2-201ENST00000539897 501 ntTSL 4 BASIC18.11■□□□□ 0.49
EXTL3O43909 BRF1-219ENST00000551787 824 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
EXTL3O43909 MARVELD3-206ENST00000567566 850 ntAPPRIS ALT2 TSL 1 (best) BASIC18.11■□□□□ 0.49
EXTL3O43909 FLYWCH2-203ENST00000572006 754 ntAPPRIS ALT2 TSL 2 BASIC18.11■□□□□ 0.49
EXTL3O43909 RPS15-207ENST00000591032 550 ntTSL 3 BASIC18.11■□□□□ 0.49
EXTL3O43909 RPS15-212ENST00000593052 629 ntTSL 2 BASIC18.11■□□□□ 0.49
EXTL3O43909 AC099522.2-201ENST00000607001 744 ntBASIC18.11■□□□□ 0.49
EXTL3O43909 AL078644.1-201ENST00000609881 752 ntBASIC18.11■□□□□ 0.49
EXTL3O43909 AL161645.1-201ENST00000622716 1255 ntBASIC18.11■□□□□ 0.49
EXTL3O43909 AC104581.1-203ENST00000640240 353 ntTSL 2 BASIC18.11■□□□□ 0.49
EXTL3O43909 AC092902.6-201ENST00000641783 218 ntBASIC18.11■□□□□ 0.49
EXTL3O43909 PNRC1-202ENST00000354922 1345 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
EXTL3O43909 ZDHHC4-206ENST00000405731 1348 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
EXTL3O43909 PRR22-202ENST00000419421 1392 ntAPPRIS P1 TSL 2 BASIC18.11■□□□□ 0.49
EXTL3O43909 ATP6V1E1-201ENST00000253413 1402 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
EXTL3O43909 SERPINB6-201ENST00000335686 1604 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
EXTL3O43909 CPSF4-201ENST00000292476 1691 ntAPPRIS P3 TSL 1 (best) BASIC18.11■□□□□ 0.49
EXTL3O43909 PACS1-209ENST00000529757 1688 ntAPPRIS ALT2 TSL 1 (best) BASIC18.11■□□□□ 0.49
EXTL3O43909 ACP5-212ENST00000592828 1699 ntAPPRIS P1 TSL 5 BASIC18.11■□□□□ 0.49
EXTL3O43909 ADCY6-202ENST00000357869 5748 ntTSL 2 BASIC18.11■□□□□ 0.49
EXTL3O43909 CLEC18C-201ENST00000314151 1934 ntAPPRIS P2 TSL 1 (best) BASIC18.11■□□□□ 0.49
EXTL3O43909 CLEC18A-208ENST00000568461 1934 ntAPPRIS P2 TSL 1 (best) BASIC18.11■□□□□ 0.49
EXTL3O43909 AC139530.2-201ENST00000571730 1922 ntAPPRIS P1 TSL 2 BASIC18.11■□□□□ 0.49
EXTL3O43909 AC009163.2-201ENST00000460606 2125 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
EXTL3O43909 PPP1R3B-202ENST00000519699 2334 ntAPPRIS P1 TSL 2 BASIC18.11■□□□□ 0.49
EXTL3O43909 FAM120AOS-201ENST00000375412 2771 ntAPPRIS P3 TSL 1 (best) BASIC18.11■□□□□ 0.49
EXTL3O43909 SEPHS1-201ENST00000327347 3273 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
EXTL3O43909 PGRMC2-208ENST00000613358 3783 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
EXTL3O43909 ALDH1A3-201ENST00000329841 3924 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Retrieved 100 of 98,524 protein–RNA pairs in 40.8 ms