Protein–RNA interactions for Protein: O43707

ACTN4, Alpha-actinin-4, humanhuman

Known RBP Predictions only

Length 911 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN4O43707 Z97056.1-201ENST00000433230 556 ntTSL 2 BASIC18.78■□□□□ 0.6
ACTN4O43707 TCTN1-208ENST00000471804 718 ntTSL 3 BASIC18.78■□□□□ 0.6
ACTN4O43707 EEF1E1-205ENST00000507463 654 ntTSL 2 BASIC18.78■□□□□ 0.6
ACTN4O43707 FSTL3-206ENST00000592947 2144 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
ACTN4O43707 GGTLC5P-201ENST00000617623 998 ntBASIC18.78■□□□□ 0.6
ACTN4O43707 ATP5S-201ENST00000245448 1671 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
ACTN4O43707 NFIX-210ENST00000588228 1692 ntTSL 2 BASIC18.78■□□□□ 0.6
ACTN4O43707 ACP5-212ENST00000592828 1699 ntAPPRIS P1 TSL 5 BASIC18.78■□□□□ 0.6
ACTN4O43707 AL353608.3-201ENST00000603200 2211 ntTSL 5 BASIC18.78■□□□□ 0.6
ACTN4O43707 RAB23-202ENST00000468148 4837 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
ACTN4O43707 PHKA1-205ENST00000541944 5944 ntAPPRIS ALT1 TSL 1 (best) BASIC18.78■□□□□ 0.6
ACTN4O43707 MAGEA2B-201ENST00000331220 1946 ntAPPRIS P1 TSL 2 BASIC18.78■□□□□ 0.6
ACTN4O43707 GCAT-201ENST00000248924 1497 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
ACTN4O43707 BEND4-201ENST00000502486 8765 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
ACTN4O43707 GCFC2-202ENST00000409857 2516 ntTSL 5 BASIC18.77■□□□□ 0.6
ACTN4O43707 CLPTM1L-209ENST00000507807 1740 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
ACTN4O43707 SETD3-201ENST00000329331 1330 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
ACTN4O43707 DUSP18-206ENST00000407308 1978 ntAPPRIS P1 TSL 5 BASIC18.77■□□□□ 0.6
ACTN4O43707 ARHGEF25-202ENST00000333972 2246 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
ACTN4O43707 C16orf71-201ENST00000299320 2722 ntAPPRIS P2 TSL 1 (best) BASIC18.77■□□□□ 0.6
ACTN4O43707 PACS1-209ENST00000529757 1688 ntAPPRIS ALT2 TSL 1 (best) BASIC18.77■□□□□ 0.6
ACTN4O43707 AATK-201ENST00000326724 5257 ntAPPRIS P3 TSL 5 BASIC18.77■□□□□ 0.6
ACTN4O43707 ZNF281-201ENST00000294740 4891 ntAPPRIS P3 TSL 1 (best) BASIC18.77■□□□□ 0.6
ACTN4O43707 MPP1-205ENST00000413259 2195 ntTSL 2 BASIC18.77■□□□□ 0.6
ACTN4O43707 RNASEH2A-201ENST00000221486 1165 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
ACTN4O43707 AC109309.1-201ENST00000418995 435 ntTSL 3 BASIC18.77■□□□□ 0.6
ACTN4O43707 BX276092.7-202ENST00000422194 696 ntTSL 3 BASIC18.77■□□□□ 0.6
ACTN4O43707 NOP16-205ENST00000509257 1000 ntTSL 2 BASIC18.77■□□□□ 0.6
ACTN4O43707 OR7E47P-204ENST00000575924 449 ntBASIC18.77■□□□□ 0.6
ACTN4O43707 PPP1R1B-208ENST00000580825 1038 ntAPPRIS P1 TSL 5 BASIC18.77■□□□□ 0.6
ACTN4O43707 AL356488.2-201ENST00000602755 427 ntBASIC18.77■□□□□ 0.6
ACTN4O43707 AL121912.1-201ENST00000603683 238 ntBASIC18.77■□□□□ 0.6
ACTN4O43707 BSG-214ENST00000614867 960 ntTSL 3 BASIC18.77■□□□□ 0.6
ACTN4O43707 AL691432.3-201ENST00000621860 400 ntBASIC18.77■□□□□ 0.6
ACTN4O43707 AC148477.8-201ENST00000624298 468 ntBASIC18.77■□□□□ 0.6
ACTN4O43707 LIN28B-AS1-205ENST00000637414 879 ntTSL 5 BASIC18.77■□□□□ 0.6
ACTN4O43707 TRPC1-201ENST00000273482 4324 ntAPPRIS P3 TSL 1 (best) BASIC18.77■□□□□ 0.6
ACTN4O43707 RSRP1-201ENST00000243189 1502 ntAPPRIS P2 TSL 1 (best) BASIC18.77■□□□□ 0.6
ACTN4O43707 CNTNAP3-201ENST00000297668 5064 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
ACTN4O43707 NGFR-201ENST00000172229 3417 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
ACTN4O43707 RBM4-204ENST00000408993 1763 ntAPPRIS P1 TSL 5 BASIC18.77■□□□□ 0.6
ACTN4O43707 EWSR1-201ENST00000331029 2267 ntTSL 5 BASIC18.77■□□□□ 0.6
ACTN4O43707 ARFGAP1-201ENST00000353546 2776 ntAPPRIS P4 TSL 1 (best) BASIC18.77■□□□□ 0.6
ACTN4O43707 EFNB3-201ENST00000226091 3222 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.59
ACTN4O43707 SLFNL1-201ENST00000302946 1951 ntAPPRIS P3 TSL 1 (best) BASIC18.77■□□□□ 0.59
ACTN4O43707 NRP1-203ENST00000374821 1988 ntTSL 1 (best) BASIC18.77■□□□□ 0.59
ACTN4O43707 PNMA6E-202ENST00000633844 2596 ntTSL 3 BASIC18.77■□□□□ 0.59
ACTN4O43707 FAM49B-202ENST00000517654 1817 ntAPPRIS P1 TSL 5 BASIC18.77■□□□□ 0.59
ACTN4O43707 AC073957.2-201ENST00000549241 1562 ntTSL 4 BASIC18.76■□□□□ 0.59
ACTN4O43707 FUT5-201ENST00000252675 1916 ntAPPRIS P1 BASIC18.76■□□□□ 0.59
ACTN4O43707 CHAT-205ENST00000395562 2528 ntAPPRIS ALT2 TSL 1 (best) BASIC18.76■□□□□ 0.59
ACTN4O43707 TLCD2-201ENST00000330676 5971 ntAPPRIS P1 TSL 2 BASIC18.76■□□□□ 0.59
ACTN4O43707 INTS11-247ENST00000540437 2629 ntTSL 2 BASIC18.76■□□□□ 0.59
ACTN4O43707 PSMC3IP-202ENST00000393795 1416 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
ACTN4O43707 REPS1-201ENST00000258062 3161 ntAPPRIS P3 TSL 1 (best) BASIC18.76■□□□□ 0.59
ACTN4O43707 ZADH2-201ENST00000322342 7732 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
ACTN4O43707 PPP1R21-206ENST00000449090 3049 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
ACTN4O43707 HOXD3-201ENST00000249440 2303 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
ACTN4O43707 CMTM3-202ENST00000424011 2330 ntAPPRIS P1 TSL 2 BASIC18.76■□□□□ 0.59
ACTN4O43707 NKIRAS1-202ENST00000412028 1605 ntAPPRIS ALT1 TSL 5 BASIC18.76■□□□□ 0.59
ACTN4O43707 VAMP5-201ENST00000306384 689 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
ACTN4O43707 IPPK-202ENST00000375522 882 ntTSL 3 BASIC18.76■□□□□ 0.59
ACTN4O43707 CENPM-204ENST00000402420 688 ntTSL 5 BASIC18.76■□□□□ 0.59
ACTN4O43707 TSTD1-204ENST00000423014 593 ntAPPRIS ALT2 TSL 2 BASIC18.76■□□□□ 0.59
ACTN4O43707 ZNF337-AS1-204ENST00000428254 817 ntTSL 5 BASIC18.76■□□□□ 0.59
ACTN4O43707 FAM197Y8-203ENST00000450145 560 ntBASIC18.76■□□□□ 0.59
ACTN4O43707 MMP17-203ENST00000535004 719 ntTSL 3 BASIC18.76■□□□□ 0.59
ACTN4O43707 AC068594.1-202ENST00000581657 749 ntTSL 3 BASIC18.76■□□□□ 0.59
ACTN4O43707 ZEB1-AS1-209ENST00000607455 559 ntTSL 4 BASIC18.76■□□□□ 0.59
ACTN4O43707 VPS51-217ENST00000639871 243 ntTSL 5 BASIC18.76■□□□□ 0.59
ACTN4O43707 ARHGAP22-201ENST00000249601 2751 ntAPPRIS P3 TSL 1 (best) BASIC18.76■□□□□ 0.59
ACTN4O43707 LARP4B-211ENST00000612396 8546 ntAPPRIS P1 TSL 5 BASIC18.76■□□□□ 0.59
ACTN4O43707 NR2C1-203ENST00000393101 1822 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
ACTN4O43707 AP2A2-222ENST00000534328 1491 ntTSL 5 BASIC18.76■□□□□ 0.59
ACTN4O43707 PRR15-201ENST00000319694 1678 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
ACTN4O43707 FMO5-208ENST00000578284 1784 ntTSL 5 BASIC18.76■□□□□ 0.59
ACTN4O43707 SDR39U1-206ENST00000553930 1325 ntTSL 5 BASIC18.75■□□□□ 0.59
ACTN4O43707 AC129492.6-201ENST00000611383 1305 ntBASIC18.75■□□□□ 0.59
ACTN4O43707 F3-202ENST00000370207 1879 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
ACTN4O43707 CMKLR1-204ENST00000550402 1893 ntAPPRIS ALT2 TSL 1 (best) BASIC18.75■□□□□ 0.59
ACTN4O43707 CACNA1I-201ENST00000401624 6740 ntAPPRIS ALT2 TSL 1 (best) BASIC18.75■□□□□ 0.59
ACTN4O43707 ZNF628-201ENST00000391718 3177 ntAPPRIS ALT2 BASIC18.75■□□□□ 0.59
ACTN4O43707 GOLGA2P2Y-202ENST00000423852 1506 ntBASIC18.75■□□□□ 0.59
ACTN4O43707 AC027796.3-201ENST00000572919 4753 ntAPPRIS P1 TSL 5 BASIC18.75■□□□□ 0.59
ACTN4O43707 SLC27A5-201ENST00000263093 2361 ntAPPRIS P3 TSL 1 (best) BASIC18.75■□□□□ 0.59
ACTN4O43707 ADAM6-201ENST00000606026 1843 ntTSL 2 BASIC18.75■□□□□ 0.59
ACTN4O43707 AGK-211ENST00000629555 2765 ntTSL 5 BASIC18.75■□□□□ 0.59
ACTN4O43707 CBWD5-204ENST00000377392 2863 ntTSL 2 BASIC18.75■□□□□ 0.59
ACTN4O43707 SMO-201ENST00000249373 3738 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
ACTN4O43707 HBA2-201ENST00000251595 605 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
ACTN4O43707 KRTCAP3-202ENST00000407293 942 ntTSL 2 BASIC18.75■□□□□ 0.59
ACTN4O43707 ELOB-202ENST00000409477 997 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
ACTN4O43707 FIGNL1-207ENST00000435566 593 ntTSL 4 BASIC18.75■□□□□ 0.59
ACTN4O43707 AC105339.3-201ENST00000560043 636 ntBASIC18.75■□□□□ 0.59
ACTN4O43707 AC013565.3-202ENST00000570120 460 ntTSL 2 BASIC18.75■□□□□ 0.59
ACTN4O43707 AC005412.3-201ENST00000580309 715 ntBASIC18.75■□□□□ 0.59
ACTN4O43707 CYB561-216ENST00000582297 897 ntTSL 3 BASIC18.75■□□□□ 0.59
ACTN4O43707 C1QL3-202ENST00000619991 783 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
ACTN4O43707 LINC01666-201ENST00000623794 845 ntTSL 5 BASIC18.75■□□□□ 0.59
ACTN4O43707 ADORA1-209ENST00000640524 653 ntTSL 5 BASIC18.75■□□□□ 0.59
Retrieved 100 of 98,524 protein–RNA pairs in 43.8 ms