Protein–RNA interactions for Protein: H3BT56

CHKB-CPT1B, CHKB-CPT1B readthrough (NMD candidate) (Fragment), humanhuman

Predictions only

Length 60 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHKB-CPT1BH3BT56 CSNK2A2-201ENST00000262506 1701 ntAPPRIS P1 TSL 1 (best) BASIC9.28□□□□□ -0.92
CHKB-CPT1BH3BT56 RPS6KB2-201ENST00000312629 1733 ntAPPRIS P1 TSL 1 (best) BASIC9.28□□□□□ -0.92
CHKB-CPT1BH3BT56 LGMN-202ENST00000393218 2115 ntAPPRIS P1 TSL 1 (best) BASIC9.28□□□□□ -0.92
CHKB-CPT1BH3BT56 NEK11-210ENST00000510769 2149 ntTSL 2 BASIC9.28□□□□□ -0.92
CHKB-CPT1BH3BT56 AXIN2-202ENST00000375702 2541 ntTSL 1 (best) BASIC9.28□□□□□ -0.92
CHKB-CPT1BH3BT56 COL25A1-201ENST00000399126 2674 ntAPPRIS ALT2 TSL 5 BASIC9.28□□□□□ -0.92
CHKB-CPT1BH3BT56 LSM6-201ENST00000296581 2259 ntAPPRIS P1 TSL 1 (best) BASIC9.28□□□□□ -0.92
CHKB-CPT1BH3BT56 PES1-202ENST00000354694 2295 ntAPPRIS P3 TSL 1 (best) BASIC9.28□□□□□ -0.92
CHKB-CPT1BH3BT56 TCP11-204ENST00000373979 1882 ntAPPRIS P3 TSL 5 BASIC9.28□□□□□ -0.92
CHKB-CPT1BH3BT56 DCPS-201ENST00000263579 1479 ntAPPRIS P1 TSL 1 (best) BASIC9.28□□□□□ -0.92
CHKB-CPT1BH3BT56 PPP6R2-202ENST00000359139 4035 ntAPPRIS ALT2 TSL 2 BASIC9.28□□□□□ -0.92
CHKB-CPT1BH3BT56 PPP1R12A-AS1-201ENST00000552885 3234 ntTSL 3 BASIC9.27□□□□□ -0.92
CHKB-CPT1BH3BT56 POLR1B-216ENST00000537335 4961 ntTSL 2 BASIC9.27□□□□□ -0.92
CHKB-CPT1BH3BT56 PIGS-203ENST00000395346 2815 ntTSL 1 (best) BASIC9.27□□□□□ -0.92
CHKB-CPT1BH3BT56 ZNF671-201ENST00000317398 2431 ntAPPRIS P1 TSL 1 (best) BASIC9.27□□□□□ -0.92
CHKB-CPT1BH3BT56 SYNDIG1L-202ENST00000554823 2420 ntAPPRIS P1 TSL 3 BASIC9.27□□□□□ -0.92
CHKB-CPT1BH3BT56 UVSSA-206ENST00000507531 2597 ntAPPRIS P2 TSL 1 (best) BASIC9.27□□□□□ -0.92
CHKB-CPT1BH3BT56 FOXF1-201ENST00000262426 3516 ntAPPRIS P1 TSL 1 (best) BASIC9.27□□□□□ -0.92
CHKB-CPT1BH3BT56 ERVK13-1-205ENST00000568395 5578 ntTSL 1 (best) BASIC9.27□□□□□ -0.92
CHKB-CPT1BH3BT56 COL8A1-201ENST00000261037 5705 ntAPPRIS P1 TSL 1 (best) BASIC9.27□□□□□ -0.92
CHKB-CPT1BH3BT56 NCK2-205ENST00000451463 1795 ntTSL 2 BASIC9.27□□□□□ -0.92
CHKB-CPT1BH3BT56 ARVCF-203ENST00000406259 2871 ntAPPRIS ALT2 TSL 5 BASIC9.27□□□□□ -0.92
CHKB-CPT1BH3BT56 COL6A2-202ENST00000310645 3446 ntTSL 5 BASIC9.27□□□□□ -0.92
CHKB-CPT1BH3BT56 SLC24A4-204ENST00000531433 4531 ntAPPRIS ALT2 TSL 2 BASIC9.27□□□□□ -0.92
CHKB-CPT1BH3BT56 LEKR1-209ENST00000491763 1940 ntTSL 1 (best) BASIC9.27□□□□□ -0.93
CHKB-CPT1BH3BT56 NCS1-201ENST00000372398 4991 ntAPPRIS P1 TSL 1 (best) BASIC9.27□□□□□ -0.93
CHKB-CPT1BH3BT56 AC004899.2-201ENST00000622993 3860 ntBASIC9.27□□□□□ -0.93
CHKB-CPT1BH3BT56 FBXO6-201ENST00000376753 1520 ntAPPRIS P1 TSL 1 (best) BASIC9.27□□□□□ -0.93
CHKB-CPT1BH3BT56 RBFOX1-207ENST00000547338 1513 ntTSL 2 BASIC9.27□□□□□ -0.93
CHKB-CPT1BH3BT56 SHROOM1-203ENST00000378679 4019 ntAPPRIS ALT2 TSL 1 (best) BASIC9.27□□□□□ -0.93
CHKB-CPT1BH3BT56 MEFV-201ENST00000219596 3499 ntAPPRIS P2 TSL 1 (best) BASIC9.27□□□□□ -0.93
CHKB-CPT1BH3BT56 IL20RA-201ENST00000316649 3485 ntAPPRIS P1 TSL 1 (best) BASIC9.27□□□□□ -0.93
CHKB-CPT1BH3BT56 SLC38A9-202ENST00000396865 2927 ntAPPRIS P1 TSL 1 (best) BASIC9.27□□□□□ -0.93
CHKB-CPT1BH3BT56 BRPF1-205ENST00000433861 4304 ntTSL 2 BASIC9.27□□□□□ -0.93
CHKB-CPT1BH3BT56 KRT13-202ENST00000336861 1673 ntAPPRIS ALT2 TSL 1 (best) BASIC9.27□□□□□ -0.93
CHKB-CPT1BH3BT56 AL356585.2-201ENST00000625078 2396 ntBASIC9.27□□□□□ -0.93
CHKB-CPT1BH3BT56 PRRT3-203ENST00000412055 3761 ntAPPRIS P3 TSL 1 (best) BASIC9.27□□□□□ -0.93
CHKB-CPT1BH3BT56 PRF1-202ENST00000441259 2533 ntAPPRIS P1 TSL 5 BASIC9.27□□□□□ -0.93
CHKB-CPT1BH3BT56 NFKB1-201ENST00000226574 4085 ntAPPRIS P3 TSL 1 (best) BASIC9.27□□□□□ -0.93
CHKB-CPT1BH3BT56 EDN3-201ENST00000311585 2655 ntAPPRIS ALT2 TSL 1 (best) BASIC9.27□□□□□ -0.93
CHKB-CPT1BH3BT56 PRNP-201ENST00000379440 2657 ntAPPRIS P1 TSL 1 (best) BASIC9.27□□□□□ -0.93
CHKB-CPT1BH3BT56 SAFB-202ENST00000454510 2650 ntAPPRIS ALT2 TSL 2 BASIC9.27□□□□□ -0.93
CHKB-CPT1BH3BT56 TNN-202ENST00000621086 4234 ntTSL 5 BASIC9.27□□□□□ -0.93
CHKB-CPT1BH3BT56 DUOXA1-210ENST00000559014 1965 ntTSL 2 BASIC9.27□□□□□ -0.93
CHKB-CPT1BH3BT56 PML-210ENST00000563500 4502 ntAPPRIS ALT2 TSL 1 (best) BASIC9.27□□□□□ -0.93
CHKB-CPT1BH3BT56 LIN7B-202ENST00000391864 582 ntTSL 3 BASIC9.27□□□□□ -0.93
CHKB-CPT1BH3BT56 MDK-203ENST00000395566 828 ntAPPRIS P2 TSL 1 (best) BASIC9.27□□□□□ -0.93
CHKB-CPT1BH3BT56 CHTF8-208ENST00000522091 863 ntTSL 2 BASIC9.27□□□□□ -0.93
CHKB-CPT1BH3BT56 MIR3621-201ENST00000580529 85 ntBASIC9.27□□□□□ -0.93
CHKB-CPT1BH3BT56 SHISA9-205ENST00000639941 1135 ntAPPRIS ALT2 TSL 5 BASIC9.27□□□□□ -0.93
CHKB-CPT1BH3BT56 AC009090.5-201ENST00000624886 2285 ntBASIC9.27□□□□□ -0.93
CHKB-CPT1BH3BT56 AP2M1-203ENST00000411763 1577 ntTSL 5 BASIC9.27□□□□□ -0.93
CHKB-CPT1BH3BT56 STYXL1-208ENST00000451157 1570 ntTSL 1 (best) BASIC9.27□□□□□ -0.93
CHKB-CPT1BH3BT56 AC003002.1-202ENST00000596755 1743 ntAPPRIS P1 BASIC9.27□□□□□ -0.93
CHKB-CPT1BH3BT56 LYPLAL1-202ENST00000366928 1898 ntAPPRIS P1 TSL 1 (best) BASIC9.27□□□□□ -0.93
CHKB-CPT1BH3BT56 EFNB1-201ENST00000204961 3314 ntAPPRIS P1 TSL 1 (best) BASIC9.27□□□□□ -0.93
CHKB-CPT1BH3BT56 AC005915.1-201ENST00000624912 2018 ntBASIC9.27□□□□□ -0.93
CHKB-CPT1BH3BT56 MARVELD3-201ENST00000268485 2912 ntAPPRIS P3 TSL 1 (best) BASIC9.27□□□□□ -0.93
CHKB-CPT1BH3BT56 LINC00667-206ENST00000582363 2935 ntTSL 2 BASIC9.27□□□□□ -0.93
CHKB-CPT1BH3BT56 VWDE-201ENST00000275358 5260 ntAPPRIS P1 TSL 5 BASIC9.27□□□□□ -0.93
CHKB-CPT1BH3BT56 SPTBN5-201ENST00000320955 11725 ntAPPRIS P1 TSL 1 (best) BASIC9.27□□□□□ -0.93
CHKB-CPT1BH3BT56 E2F6-202ENST00000381525 3218 ntAPPRIS P1 TSL 1 (best) BASIC9.27□□□□□ -0.93
CHKB-CPT1BH3BT56 DUSP18-205ENST00000404885 1306 ntAPPRIS P1 TSL 1 (best) BASIC9.27□□□□□ -0.93
CHKB-CPT1BH3BT56 RDX-218ENST00000544551 4117 ntTSL 2 BASIC9.27□□□□□ -0.93
CHKB-CPT1BH3BT56 SNAP91-215ENST00000521743 4263 ntAPPRIS P2 TSL 5 BASIC9.27□□□□□ -0.93
CHKB-CPT1BH3BT56 SPECC1-206ENST00000395530 8133 ntTSL 1 (best) BASIC9.27□□□□□ -0.93
CHKB-CPT1BH3BT56 PEPD-203ENST00000436370 1638 ntTSL 2 BASIC9.27□□□□□ -0.93
CHKB-CPT1BH3BT56 MINOS1-NBL1-204ENST00000602662 1623 ntAPPRIS P1 TSL 2 BASIC9.27□□□□□ -0.93
CHKB-CPT1BH3BT56 TMUB2-202ENST00000357984 1921 ntAPPRIS P3 TSL 1 (best) BASIC9.27□□□□□ -0.93
CHKB-CPT1BH3BT56 HOXA-AS3-205ENST00000524304 2063 ntTSL 2 BASIC9.27□□□□□ -0.93
CHKB-CPT1BH3BT56 CAST-224ENST00000508830 2539 ntAPPRIS ALT2 TSL 5 BASIC9.27□□□□□ -0.93
CHKB-CPT1BH3BT56 FSIP1-201ENST00000350221 2805 ntAPPRIS P2 TSL 1 (best) BASIC9.27□□□□□ -0.93
CHKB-CPT1BH3BT56 ABLIM2-213ENST00000514025 2974 ntTSL 2 BASIC9.27□□□□□ -0.93
CHKB-CPT1BH3BT56 ZCCHC9-201ENST00000254037 4606 ntAPPRIS P1 TSL 2 BASIC9.27□□□□□ -0.93
CHKB-CPT1BH3BT56 PPIL2-201ENST00000335025 4929 ntAPPRIS P1 TSL 1 (best) BASIC9.27□□□□□ -0.93
CHKB-CPT1BH3BT56 ATE1-203ENST00000369043 4900 ntAPPRIS ALT1 TSL 1 (best) BASIC9.27□□□□□ -0.93
CHKB-CPT1BH3BT56 ZFHX2-202ENST00000419474 9182 ntAPPRIS P1 TSL 5 BASIC9.26□□□□□ -0.93
CHKB-CPT1BH3BT56 CRY2-202ENST00000443527 4203 ntAPPRIS P2 TSL 1 (best) BASIC9.26□□□□□ -0.93
CHKB-CPT1BH3BT56 SLC4A7-214ENST00000455077 3775 ntAPPRIS ALT2 TSL 1 (best) BASIC9.26□□□□□ -0.93
CHKB-CPT1BH3BT56 SHISA2-201ENST00000319420 2860 ntAPPRIS P1 TSL 1 (best) BASIC9.26□□□□□ -0.93
CHKB-CPT1BH3BT56 AC068888.1-207ENST00000546793 2863 ntTSL 2 BASIC9.26□□□□□ -0.93
CHKB-CPT1BH3BT56 LINC01267-201ENST00000502417 2284 ntTSL 2 BASIC9.26□□□□□ -0.93
CHKB-CPT1BH3BT56 BAK1-201ENST00000360661 2132 ntTSL 5 BASIC9.26□□□□□ -0.93
CHKB-CPT1BH3BT56 TP73-205ENST00000378285 2117 ntTSL 1 (best) BASIC9.26□□□□□ -0.93
CHKB-CPT1BH3BT56 DDOST-202ENST00000415136 2126 ntTSL 1 (best) BASIC9.26□□□□□ -0.93
CHKB-CPT1BH3BT56 MAX-204ENST00000358402 1973 ntTSL 1 (best) BASIC9.26□□□□□ -0.93
CHKB-CPT1BH3BT56 TCTN1-229ENST00000614115 1965 ntTSL 5 BASIC9.26□□□□□ -0.93
CHKB-CPT1BH3BT56 RAB39A-201ENST00000320578 1830 ntAPPRIS P1 TSL 1 (best) BASIC9.26□□□□□ -0.93
CHKB-CPT1BH3BT56 ABHD3-209ENST00000580981 1836 ntTSL 5 BASIC9.26□□□□□ -0.93
CHKB-CPT1BH3BT56 SOCS2-AS1-202ENST00000500986 1655 ntTSL 2 BASIC9.26□□□□□ -0.93
CHKB-CPT1BH3BT56 MFGE8-215ENST00000566497 1689 ntAPPRIS P1 TSL 5 BASIC9.26□□□□□ -0.93
CHKB-CPT1BH3BT56 TRMU-202ENST00000381019 1381 ntTSL 1 (best) BASIC9.26□□□□□ -0.93
CHKB-CPT1BH3BT56 GLS2-201ENST00000311966 2623 ntAPPRIS P1 TSL 1 (best) BASIC9.26□□□□□ -0.93
CHKB-CPT1BH3BT56 WDR27-201ENST00000423258 2465 ntAPPRIS ALT2 TSL 1 (best) BASIC9.26□□□□□ -0.93
CHKB-CPT1BH3BT56 MAMDC4-202ENST00000445819 3895 ntAPPRIS ALT2 TSL 5 BASIC9.26□□□□□ -0.93
CHKB-CPT1BH3BT56 POC1B-GALNT4-202ENST00000548729 5436 ntAPPRIS P1 TSL 2 BASIC9.26□□□□□ -0.93
CHKB-CPT1BH3BT56 AC005264.1-201ENST00000587587 2319 ntTSL 2 BASIC9.26□□□□□ -0.93
CHKB-CPT1BH3BT56 IL17RD-208ENST00000640796 2345 ntTSL 1 (best) BASIC9.26□□□□□ -0.93
CHKB-CPT1BH3BT56 VSTM4-202ENST00000332853 6392 ntAPPRIS ALT2 TSL 1 (best) BASIC9.26□□□□□ -0.93
CHKB-CPT1BH3BT56 TGIF2-201ENST00000373872 3406 ntAPPRIS P1 TSL 1 (best) BASIC9.26□□□□□ -0.93
Retrieved 100 of 98,524 protein–RNA pairs in 41 ms