Protein–RNA interactions for Protein: D6RIA3

LOC285556, Uncharacterized protein, humanhuman

Predictions only

Length 1,793 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LOC285556D6RIA3 NDUFS8-201ENST00000313468 791 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
LOC285556D6RIA3 LINC02298-201ENST00000546968 965 ntTSL 5 BASIC18.83■□□□□ 0.61
LOC285556D6RIA3 AC123567.1-201ENST00000548294 1261 ntBASIC18.83■□□□□ 0.61
LOC285556D6RIA3 CTBP2P3-201ENST00000585629 1255 ntBASIC18.83■□□□□ 0.61
LOC285556D6RIA3 WNT5B-202ENST00000397196 2303 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
LOC285556D6RIA3 LRCH3-201ENST00000334859 2258 ntTSL 1 (best) BASIC18.83■□□□□ 0.61
LOC285556D6RIA3 LINC01660-203ENST00000618517 1859 ntTSL 2 BASIC18.83■□□□□ 0.6
LOC285556D6RIA3 TESMIN-201ENST00000255087 2579 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
LOC285556D6RIA3 KCTD15-202ENST00000430256 2555 ntAPPRIS P1 TSL 2 BASIC18.83■□□□□ 0.6
LOC285556D6RIA3 TSC22D3-203ENST00000372383 2266 ntTSL 2 BASIC18.83■□□□□ 0.6
LOC285556D6RIA3 TBX4-201ENST00000240335 2470 ntAPPRIS P3 TSL 1 (best) BASIC18.83■□□□□ 0.6
LOC285556D6RIA3 GTPBP3-222ENST00000600625 2493 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
LOC285556D6RIA3 HAPLN3-201ENST00000359595 1980 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
LOC285556D6RIA3 HRCT1-201ENST00000354323 950 ntAPPRIS P1 BASIC18.83■□□□□ 0.6
LOC285556D6RIA3 COPS6-202ENST00000418625 1107 ntAPPRIS ALT2 TSL 5 BASIC18.83■□□□□ 0.6
LOC285556D6RIA3 LINC01605-204ENST00000522718 1093 ntTSL 3 BASIC18.83■□□□□ 0.6
LOC285556D6RIA3 TMEM218-210ENST00000529609 734 ntTSL 3 BASIC18.83■□□□□ 0.6
LOC285556D6RIA3 AC025048.3-201ENST00000590609 569 ntBASIC18.83■□□□□ 0.6
LOC285556D6RIA3 KLK15-203ENST00000596931 692 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
LOC285556D6RIA3 KLK15-204ENST00000598239 855 ntAPPRIS P3 TSL 1 (best) BASIC18.83■□□□□ 0.6
LOC285556D6RIA3 AC074044.1-201ENST00000609673 707 ntBASIC18.83■□□□□ 0.6
LOC285556D6RIA3 AC005702.4-201ENST00000618393 416 ntBASIC18.83■□□□□ 0.6
LOC285556D6RIA3 RPSAP52-203ENST00000622976 1023 ntBASIC18.83■□□□□ 0.6
LOC285556D6RIA3 PIMREG-201ENST00000250056 1473 ntAPPRIS ALT2 TSL 1 (best) BASIC18.83■□□□□ 0.6
LOC285556D6RIA3 ANKRD24-201ENST00000262970 3711 ntAPPRIS ALT2 TSL 5 BASIC18.83■□□□□ 0.6
LOC285556D6RIA3 BAG3-201ENST00000369085 2571 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
LOC285556D6RIA3 AL645728.1-201ENST00000366221 2101 ntBASIC18.83■□□□□ 0.6
LOC285556D6RIA3 BANP-227ENST00000626016 2144 ntTSL 2 BASIC18.83■□□□□ 0.6
LOC285556D6RIA3 CTSB-220ENST00000531089 1436 ntAPPRIS P1 TSL 5 BASIC18.82■□□□□ 0.6
LOC285556D6RIA3 CYB5R3-204ENST00000407332 1849 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
LOC285556D6RIA3 ZNF48-206ENST00000622647 2695 ntTSL 4 BASIC18.82■□□□□ 0.6
LOC285556D6RIA3 RELA-227ENST00000615805 2236 ntTSL 5 BASIC18.82■□□□□ 0.6
LOC285556D6RIA3 KCNC4-203ENST00000413138 3018 ntAPPRIS ALT2 TSL 5 BASIC18.82■□□□□ 0.6
LOC285556D6RIA3 PLPPR2-208ENST00000591608 2552 ntAPPRIS ALT2 TSL 2 BASIC18.82■□□□□ 0.6
LOC285556D6RIA3 FBXW9-201ENST00000393261 1738 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
LOC285556D6RIA3 SERAC1-201ENST00000367101 1907 ntTSL 5 BASIC18.82■□□□□ 0.6
LOC285556D6RIA3 LGALS2-201ENST00000215886 591 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
LOC285556D6RIA3 GPR148-201ENST00000309926 1267 ntAPPRIS P1 BASIC18.82■□□□□ 0.6
LOC285556D6RIA3 AP000317.2-201ENST00000362077 641 ntTSL 3 BASIC18.82■□□□□ 0.6
LOC285556D6RIA3 RPS2P32-201ENST00000439199 892 ntBASIC18.82■□□□□ 0.6
LOC285556D6RIA3 MACROD2-AS1-201ENST00000439451 1230 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
LOC285556D6RIA3 AC082651.1-201ENST00000478468 832 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
LOC285556D6RIA3 GS1-24F4.2-201ENST00000500823 1110 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
LOC285556D6RIA3 EMC4-203ENST00000557879 1009 ntTSL 3 BASIC18.82■□□□□ 0.6
LOC285556D6RIA3 AC105339.1-202ENST00000559535 1283 ntTSL 5 BASIC18.82■□□□□ 0.6
LOC285556D6RIA3 ELOF1-206ENST00000590700 585 ntAPPRIS P1 TSL 3 BASIC18.82■□□□□ 0.6
LOC285556D6RIA3 MRNIP-225ENST00000610475 810 ntTSL 5 BASIC18.82■□□□□ 0.6
LOC285556D6RIA3 NFATC4-215ENST00000554661 2631 ntAPPRIS ALT2 TSL 1 (best) BASIC18.82■□□□□ 0.6
LOC285556D6RIA3 CDK11A-203ENST00000357760 2446 ntAPPRIS ALT1 TSL 1 (best) BASIC18.82■□□□□ 0.6
LOC285556D6RIA3 CDK11A-204ENST00000358779 2419 ntAPPRIS ALT1 TSL 1 (best) BASIC18.82■□□□□ 0.6
LOC285556D6RIA3 CDK11A-206ENST00000378638 2429 ntTSL 5 BASIC18.82■□□□□ 0.6
LOC285556D6RIA3 CDK11A-208ENST00000404249 2449 ntAPPRIS P4 TSL 1 (best) BASIC18.82■□□□□ 0.6
LOC285556D6RIA3 CD99P1-204ENST00000435581 2788 ntTSL 2 BASIC18.82■□□□□ 0.6
LOC285556D6RIA3 SNHG22-201ENST00000589499 1615 ntTSL 2 BASIC18.82■□□□□ 0.6
LOC285556D6RIA3 NPAS3-201ENST00000346562 5847 ntAPPRIS P3 TSL 1 (best) BASIC18.82■□□□□ 0.6
LOC285556D6RIA3 CALM3-212ENST00000599839 1355 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
LOC285556D6RIA3 HMCN2-204ENST00000611173 1920 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
LOC285556D6RIA3 PLEKHB1-203ENST00000398492 2275 ntAPPRIS ALT1 TSL 1 (best) BASIC18.82■□□□□ 0.6
LOC285556D6RIA3 MRS2-202ENST00000378353 1740 ntAPPRIS ALT2 TSL 1 (best) BASIC18.82■□□□□ 0.6
LOC285556D6RIA3 FBXO15-201ENST00000419743 1708 ntAPPRIS P2 TSL 2 BASIC18.82■□□□□ 0.6
LOC285556D6RIA3 UBL7-209ENST00000567435 1720 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
LOC285556D6RIA3 TVP23C-201ENST00000225576 1527 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
LOC285556D6RIA3 CABP1-204ENST00000453000 1857 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
LOC285556D6RIA3 AMT-206ENST00000458307 1860 ntTSL 2 BASIC18.82■□□□□ 0.6
LOC285556D6RIA3 CABP7-201ENST00000216144 3259 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
LOC285556D6RIA3 POMP-201ENST00000380842 1330 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
LOC285556D6RIA3 TGIF1-205ENST00000401449 1670 ntTSL 2 BASIC18.81■□□□□ 0.6
LOC285556D6RIA3 TCP1-203ENST00000420894 1671 ntTSL 5 BASIC18.81■□□□□ 0.6
LOC285556D6RIA3 MTHFD2L-203ENST00000395759 2354 ntAPPRIS P2 TSL 5 BASIC18.81■□□□□ 0.6
LOC285556D6RIA3 CMPK2-201ENST00000256722 2884 ntAPPRIS P3 TSL 1 (best) BASIC18.81■□□□□ 0.6
LOC285556D6RIA3 FLVCR1-AS1-201ENST00000356684 2525 ntTSL 2 BASIC18.81■□□□□ 0.6
LOC285556D6RIA3 LINC00221-202ENST00000619530 1499 ntTSL 2 BASIC18.81■□□□□ 0.6
LOC285556D6RIA3 RDH13-202ENST00000396247 1987 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
LOC285556D6RIA3 FAM193A-211ENST00000637812 4885 ntAPPRIS ALT2 TSL 5 BASIC18.81■□□□□ 0.6
LOC285556D6RIA3 RHCE-206ENST00000413854 1198 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
LOC285556D6RIA3 DGCR6-202ENST00000413981 1039 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
LOC285556D6RIA3 FAM197Y5-201ENST00000423213 765 ntTSL 5 BASIC18.81■□□□□ 0.6
LOC285556D6RIA3 AC062015.1-201ENST00000423838 1134 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
LOC285556D6RIA3 KDM4A-AS1-204ENST00000439057 686 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
LOC285556D6RIA3 IQCF3-202ENST00000440739 505 ntAPPRIS P1 TSL 2 BASIC18.81■□□□□ 0.6
LOC285556D6RIA3 AC007389.4-201ENST00000454674 793 ntBASIC18.81■□□□□ 0.6
LOC285556D6RIA3 CNOT8-210ENST00000519404 945 ntTSL 2 BASIC18.81■□□□□ 0.6
LOC285556D6RIA3 CNOT8-214ENST00000520671 923 ntTSL 2 BASIC18.81■□□□□ 0.6
LOC285556D6RIA3 CNOT8-218ENST00000521583 1151 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
LOC285556D6RIA3 AP003385.5-201ENST00000533876 555 ntTSL 4 BASIC18.81■□□□□ 0.6
LOC285556D6RIA3 CHRNA5-203ENST00000559554 1051 ntTSL 3 BASIC18.81■□□□□ 0.6
LOC285556D6RIA3 EIPR1-202ENST00000398659 1795 ntTSL 5 BASIC18.81■□□□□ 0.6
LOC285556D6RIA3 SLC39A7-202ENST00000374677 2409 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
LOC285556D6RIA3 FGFR4-202ENST00000393637 2418 ntAPPRIS ALT2 TSL 1 (best) BASIC18.81■□□□□ 0.6
LOC285556D6RIA3 AGAP6-201ENST00000374056 2703 ntAPPRIS ALT2 TSL 1 (best) BASIC18.81■□□□□ 0.6
LOC285556D6RIA3 TONSL-203ENST00000613741 1713 ntTSL 5 BASIC18.81■□□□□ 0.6
LOC285556D6RIA3 SPDEF-201ENST00000374037 1895 ntAPPRIS P3 TSL 1 (best) BASIC18.81■□□□□ 0.6
LOC285556D6RIA3 NGLY1-207ENST00000428257 2534 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
LOC285556D6RIA3 RNF165-204ENST00000587853 2011 ntTSL 5 BASIC18.81■□□□□ 0.6
LOC285556D6RIA3 DDC-202ENST00000380984 1366 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
LOC285556D6RIA3 ACTR3-208ENST00000535589 1530 ntTSL 2 BASIC18.81■□□□□ 0.6
LOC285556D6RIA3 CSF1-204ENST00000369802 2484 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
LOC285556D6RIA3 ZMAT3-203ENST00000432729 2944 ntAPPRIS ALT1 TSL 2 BASIC18.81■□□□□ 0.6
LOC285556D6RIA3 KCNA3-201ENST00000369769 2569 ntAPPRIS P1 BASIC18.81■□□□□ 0.6
LOC285556D6RIA3 CYB5R2-204ENST00000524790 1338 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
Retrieved 100 of 98,524 protein–RNA pairs in 37.9 ms