Protein–RNA interactions for Protein: A8K7I4

CLCA1, Calcium-activated chloride channel regulator 1, humanhuman

Predictions only

Length 914 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLCA1A8K7I4 DZIP1L-204ENST00000469243 2107 ntAPPRIS ALT2 TSL 2 BASIC15.73■□□□□ 0.11
CLCA1A8K7I4 WASHC2C-209ENST00000540872 4519 ntAPPRIS ALT2 TSL 1 (best) BASIC15.73■□□□□ 0.11
CLCA1A8K7I4 RGL3-201ENST00000380456 2542 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
CLCA1A8K7I4 FBXO24-206ENST00000468962 1901 ntTSL 2 BASIC15.72■□□□□ 0.11
CLCA1A8K7I4 PEX16-201ENST00000241041 1479 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
CLCA1A8K7I4 HNRNPDL-210ENST00000630827 1318 ntAPPRIS ALT2 TSL 5 BASIC15.72■□□□□ 0.11
CLCA1A8K7I4 CCDC71L-202ENST00000523505 4232 ntAPPRIS P2 BASIC15.72■□□□□ 0.11
CLCA1A8K7I4 ADM-201ENST00000278175 1885 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
CLCA1A8K7I4 HOXA10-202ENST00000396344 1570 ntAPPRIS ALT1 TSL 1 (best) BASIC15.72■□□□□ 0.11
CLCA1A8K7I4 COQ8B-202ENST00000324464 2443 ntAPPRIS P3 TSL 1 (best) BASIC15.72■□□□□ 0.11
CLCA1A8K7I4 AL513477.1-201ENST00000602865 2407 ntBASIC15.72■□□□□ 0.11
CLCA1A8K7I4 UXT-202ENST00000335890 701 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
CLCA1A8K7I4 SIGLEC8-202ENST00000340550 1293 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
CLCA1A8K7I4 DPM3-201ENST00000341298 486 ntAPPRIS P1 TSL 2 BASIC15.72■□□□□ 0.11
CLCA1A8K7I4 C6orf48-203ENST00000375638 847 ntAPPRIS P1 TSL 2 BASIC15.72■□□□□ 0.11
CLCA1A8K7I4 C6orf48-207ENST00000375642 962 ntAPPRIS P1 TSL 2 BASIC15.72■□□□□ 0.11
CLCA1A8K7I4 SPDYE21P-201ENST00000413323 827 ntBASIC15.72■□□□□ 0.11
CLCA1A8K7I4 NDUFA6-202ENST00000498737 1256 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
CLCA1A8K7I4 TRAF3IP2-AS1-208ENST00000525151 609 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
CLCA1A8K7I4 AP001107.6-201ENST00000526655 516 ntTSL 3 BASIC15.72■□□□□ 0.11
CLCA1A8K7I4 ARAP1-AS1-201ENST00000542022 388 ntTSL 5 BASIC15.72■□□□□ 0.11
CLCA1A8K7I4 AC139887.3-201ENST00000568585 713 ntBASIC15.72■□□□□ 0.11
CLCA1A8K7I4 RNF151-202ENST00000569210 853 ntTSL 2 BASIC15.72■□□□□ 0.11
CLCA1A8K7I4 AC109462.3-201ENST00000573934 613 ntBASIC15.72■□□□□ 0.11
CLCA1A8K7I4 NDUFA6-203ENST00000602404 1080 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
CLCA1A8K7I4 AC019129.2-201ENST00000609837 1235 ntBASIC15.72■□□□□ 0.11
CLCA1A8K7I4 NPAS4-204ENST00000639555 878 ntTSL 5 BASIC15.72■□□□□ 0.11
CLCA1A8K7I4 AL022326.1-202ENST00000641533 845 ntBASIC15.72■□□□□ 0.11
CLCA1A8K7I4 ZC3H12A-201ENST00000373087 2684 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
CLCA1A8K7I4 KRT35-202ENST00000393989 1670 ntAPPRIS P1 TSL 5 BASIC15.72■□□□□ 0.11
CLCA1A8K7I4 PTK6-202ENST00000542869 2931 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
CLCA1A8K7I4 SYBU-231ENST00000533065 2645 ntAPPRIS ALT2 TSL 2 BASIC15.72■□□□□ 0.11
CLCA1A8K7I4 CTIF-201ENST00000256413 5750 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
CLCA1A8K7I4 AC243591.1-201ENST00000452967 1364 ntBASIC15.72■□□□□ 0.11
CLCA1A8K7I4 CCDC90B-203ENST00000525503 1919 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
CLCA1A8K7I4 C2orf81-202ENST00000612891 1902 ntAPPRIS ALT2 TSL 5 BASIC15.72■□□□□ 0.11
CLCA1A8K7I4 OGFOD2-202ENST00000397389 2308 ntTSL 2 BASIC15.72■□□□□ 0.11
CLCA1A8K7I4 SLC9A7-201ENST00000328306 3838 ntAPPRIS P3 TSL 1 (best) BASIC15.72■□□□□ 0.11
CLCA1A8K7I4 FAM86DP-207ENST00000497543 2152 ntTSL 2 BASIC15.72■□□□□ 0.11
CLCA1A8K7I4 PPARD-202ENST00000337400 2041 ntTSL 5 BASIC15.72■□□□□ 0.11
CLCA1A8K7I4 NKIRAS1-206ENST00000425478 2014 ntAPPRIS P2 TSL 1 (best) BASIC15.72■□□□□ 0.11
CLCA1A8K7I4 LINC00942-201ENST00000515614 2417 ntTSL 5 BASIC15.72■□□□□ 0.11
CLCA1A8K7I4 ST8SIA5-202ENST00000536490 1499 ntTSL 2 BASIC15.71■□□□□ 0.11
CLCA1A8K7I4 ISCU-205ENST00000535729 1330 ntTSL 2 BASIC15.71■□□□□ 0.11
CLCA1A8K7I4 TRA2A-202ENST00000392502 2229 ntAPPRIS ALT2 TSL 2 BASIC15.71■□□□□ 0.11
CLCA1A8K7I4 KCNQ2-215ENST00000629241 2853 ntTSL 5 BASIC15.71■□□□□ 0.11
CLCA1A8K7I4 SREBF1-201ENST00000261646 4178 ntAPPRIS P3 TSL 1 (best) BASIC15.71■□□□□ 0.11
CLCA1A8K7I4 RCOR3-204ENST00000452621 1827 ntTSL 2 BASIC15.71■□□□□ 0.11
CLCA1A8K7I4 HMOX2-217ENST00000619528 1829 ntAPPRIS P1 TSL 5 BASIC15.71■□□□□ 0.11
CLCA1A8K7I4 AMT-250ENST00000637682 1823 ntTSL 5 BASIC15.71■□□□□ 0.11
CLCA1A8K7I4 MBD4-206ENST00000507208 2194 ntAPPRIS ALT2 TSL 2 BASIC15.71■□□□□ 0.11
CLCA1A8K7I4 MRPL28-201ENST00000199706 1098 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
CLCA1A8K7I4 GOSR2-201ENST00000225567 1245 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
CLCA1A8K7I4 GHSR-201ENST00000241256 1172 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
CLCA1A8K7I4 AP000688.4-201ENST00000436303 446 ntTSL 3 BASIC15.71■□□□□ 0.11
CLCA1A8K7I4 PRSS8-206ENST00000568261 1214 ntTSL 2 BASIC15.71■□□□□ 0.11
CLCA1A8K7I4 LITAF-211ENST00000572255 516 ntTSL 4 BASIC15.71■□□□□ 0.11
CLCA1A8K7I4 LITAF-215ENST00000574763 717 ntAPPRIS P1 TSL 3 BASIC15.71■□□□□ 0.11
CLCA1A8K7I4 CIRBP-235ENST00000591935 746 ntAPPRIS ALT1 TSL 3 BASIC15.71■□□□□ 0.11
CLCA1A8K7I4 FOXP1-223ENST00000622151 429 ntTSL 3 BASIC15.71■□□□□ 0.11
CLCA1A8K7I4 AC073592.4-201ENST00000623827 446 ntBASIC15.71■□□□□ 0.11
CLCA1A8K7I4 NAA30-204ENST00000556492 7644 ntAPPRIS P2 TSL 1 (best) BASIC15.71■□□□□ 0.11
CLCA1A8K7I4 UBQLN1-201ENST00000257468 2299 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
CLCA1A8K7I4 NR4A1-204ENST00000394825 2528 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
CLCA1A8K7I4 MGAT1-201ENST00000307826 2761 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
CLCA1A8K7I4 GBA2-202ENST00000378094 3757 ntAPPRIS ALT2 TSL 1 (best) BASIC15.71■□□□□ 0.11
CLCA1A8K7I4 PRPF31-201ENST00000321030 2126 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
CLCA1A8K7I4 PRICKLE4-204ENST00000458694 1646 ntAPPRIS P2 TSL 5 BASIC15.71■□□□□ 0.11
CLCA1A8K7I4 TVP23B-202ENST00000476139 2989 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
CLCA1A8K7I4 TCP11L2-201ENST00000299045 2219 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.1
CLCA1A8K7I4 CCDC59-201ENST00000256151 1983 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.1
CLCA1A8K7I4 LINC00671-201ENST00000301683 1958 ntTSL 2 BASIC15.71■□□□□ 0.1
CLCA1A8K7I4 SLC27A1-201ENST00000252595 3594 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.1
CLCA1A8K7I4 YTHDF2-209ENST00000542507 2825 ntAPPRIS P1 TSL 5 BASIC15.71■□□□□ 0.1
CLCA1A8K7I4 PKLR-201ENST00000342741 2083 ntTSL 1 (best) BASIC15.71■□□□□ 0.1
CLCA1A8K7I4 PCDHA13-202ENST00000409494 4884 ntTSL 1 (best) BASIC15.71■□□□□ 0.1
CLCA1A8K7I4 TMEM39B-201ENST00000336294 1813 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.1
CLCA1A8K7I4 CNOT6-207ENST00000618123 6250 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
CLCA1A8K7I4 ATG5-210ENST00000636437 2261 ntTSL 5 BASIC15.7■□□□□ 0.1
CLCA1A8K7I4 PPP1CB-202ENST00000358506 4771 ntAPPRIS P1 TSL 5 BASIC15.7■□□□□ 0.1
CLCA1A8K7I4 TAOK2-203ENST00000416441 4780 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
CLCA1A8K7I4 EDN3-202ENST00000337938 2636 ntAPPRIS P4 TSL 1 (best) BASIC15.7■□□□□ 0.1
CLCA1A8K7I4 SIGLEC16-201ENST00000599858 1437 ntBASIC15.7■□□□□ 0.1
CLCA1A8K7I4 TTBK2-208ENST00000622375 6891 ntAPPRIS ALT2 TSL 1 (best) BASIC15.7■□□□□ 0.1
CLCA1A8K7I4 MGME1-201ENST00000377704 1781 ntTSL 3 BASIC15.7■□□□□ 0.1
CLCA1A8K7I4 AC004817.3-201ENST00000602957 2129 ntBASIC15.7■□□□□ 0.1
CLCA1A8K7I4 FUT8-AS1-201ENST00000621019 1521 ntBASIC15.7■□□□□ 0.1
CLCA1A8K7I4 MAPK8IP2-202ENST00000329492 3381 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
CLCA1A8K7I4 PPP1R21-206ENST00000449090 3049 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
CLCA1A8K7I4 GABRB2-202ENST00000353437 1963 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
CLCA1A8K7I4 MIR574-201ENST00000385209 96 ntBASIC15.7■□□□□ 0.1
CLCA1A8K7I4 KRT18P13-201ENST00000400056 1290 ntBASIC15.7■□□□□ 0.1
CLCA1A8K7I4 KLF4P1-201ENST00000412782 1185 ntBASIC15.7■□□□□ 0.1
CLCA1A8K7I4 AL020989.1-201ENST00000422979 469 ntBASIC15.7■□□□□ 0.1
CLCA1A8K7I4 PITPNA-AS1-201ENST00000425081 542 ntTSL 2 BASIC15.7■□□□□ 0.1
CLCA1A8K7I4 RPP21-221ENST00000428040 594 ntTSL 2 BASIC15.7■□□□□ 0.1
CLCA1A8K7I4 NICN1-204ENST00000436744 1271 ntTSL 2 BASIC15.7■□□□□ 0.1
CLCA1A8K7I4 RPP21-224ENST00000442966 525 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
CLCA1A8K7I4 PRSS21-202ENST00000450020 1106 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
CLCA1A8K7I4 AC139887.2-202ENST00000507446 534 ntTSL 4 BASIC15.7■□□□□ 0.1
Retrieved 100 of 98,524 protein–RNA pairs in 30.7 ms