Protein–RNA interactions for Protein: Q9UN71

PCDHGB4, Protocadherin gamma-B4, humanhuman

Predictions only

Length 923 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGB4Q9UN71 PKM-216ENST00000565184 2503 ntAPPRIS ALT1 TSL 1 (best) BASIC16.33■□□□□ 0.2
PCDHGB4Q9UN71 UBE2J2-204ENST00000400929 1057 ntTSL 3 BASIC16.33■□□□□ 0.2
PCDHGB4Q9UN71 ZNF655-215ENST00000440391 1198 ntTSL 2 BASIC16.33■□□□□ 0.2
PCDHGB4Q9UN71 AC007220.1-201ENST00000572466 1055 ntTSL 3 BASIC16.33■□□□□ 0.2
PCDHGB4Q9UN71 AC010632.1-201ENST00000590376 572 ntTSL 4 BASIC16.33■□□□□ 0.2
PCDHGB4Q9UN71 IGFLR1-209ENST00000592537 1195 ntAPPRIS P2 TSL 1 (best) BASIC16.33■□□□□ 0.2
PCDHGB4Q9UN71 NTF4-201ENST00000593537 932 ntAPPRIS P1 BASIC16.33■□□□□ 0.2
PCDHGB4Q9UN71 H2BFWT-202ENST00000611083 528 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
PCDHGB4Q9UN71 AL807752.6-202ENST00000622933 765 ntAPPRIS P5 TSL 3 BASIC16.33■□□□□ 0.2
PCDHGB4Q9UN71 ZNF30-202ENST00000439785 2651 ntAPPRIS P4 TSL 5 BASIC16.33■□□□□ 0.2
PCDHGB4Q9UN71 AC016734.2-201ENST00000624325 1377 ntBASIC16.33■□□□□ 0.2
PCDHGB4Q9UN71 TMEM237-202ENST00000409444 5592 ntAPPRIS ALT2 TSL 5 BASIC16.33■□□□□ 0.2
PCDHGB4Q9UN71 CACFD1-206ENST00000540581 2880 ntAPPRIS ALT2 TSL 2 BASIC16.33■□□□□ 0.2
PCDHGB4Q9UN71 MAPKAPK3-203ENST00000446044 2988 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
PCDHGB4Q9UN71 RBFOX1-207ENST00000547338 1513 ntTSL 2 BASIC16.33■□□□□ 0.2
PCDHGB4Q9UN71 ZNF296-202ENST00000622376 1631 ntAPPRIS ALT2 TSL 1 (best) BASIC16.33■□□□□ 0.2
PCDHGB4Q9UN71 AL135999.2-201ENST00000622438 1686 ntBASIC16.33■□□□□ 0.2
PCDHGB4Q9UN71 DIS3-202ENST00000377780 5232 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
PCDHGB4Q9UN71 CXorf58-201ENST00000379211 1752 ntAPPRIS P2 TSL 1 (best) BASIC16.33■□□□□ 0.2
PCDHGB4Q9UN71 TBXAS1-202ENST00000411653 1792 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
PCDHGB4Q9UN71 RANBP3-220ENST00000591092 1783 ntAPPRIS ALT2 TSL 1 (best) BASIC16.33■□□□□ 0.2
PCDHGB4Q9UN71 ZFP64-205ENST00000371518 1841 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
PCDHGB4Q9UN71 AL590627.1-201ENST00000626603 1910 ntTSL 2 BASIC16.33■□□□□ 0.2
PCDHGB4Q9UN71 TMUB2-209ENST00000587989 1969 ntAPPRIS ALT1 TSL 3 BASIC16.33■□□□□ 0.2
PCDHGB4Q9UN71 IL12RB2-201ENST00000262345 4040 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
PCDHGB4Q9UN71 KIF3A-202ENST00000378746 6325 ntAPPRIS P3 TSL 5 BASIC16.33■□□□□ 0.2
PCDHGB4Q9UN71 AC136759.1-201ENST00000534201 2163 ntTSL 2 BASIC16.33■□□□□ 0.2
PCDHGB4Q9UN71 AVL9-201ENST00000318709 6982 ntAPPRIS P1 TSL 2 BASIC16.33■□□□□ 0.2
PCDHGB4Q9UN71 PDGFA-203ENST00000402802 2305 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
PCDHGB4Q9UN71 C14orf79-205ENST00000549240 2503 ntAPPRIS ALT2 TSL 2 BASIC16.33■□□□□ 0.2
PCDHGB4Q9UN71 SLITRK2-202ENST00000370490 7672 ntAPPRIS P1 BASIC16.33■□□□□ 0.2
PCDHGB4Q9UN71 MBD1-202ENST00000269471 2980 ntAPPRIS ALT2 TSL 5 BASIC16.32■□□□□ 0.2
PCDHGB4Q9UN71 SLC26A1-202ENST00000398516 3109 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
PCDHGB4Q9UN71 CHD4-210ENST00000544040 6514 ntAPPRIS ALT2 TSL 5 BASIC16.32■□□□□ 0.2
PCDHGB4Q9UN71 GAPDH-201ENST00000229239 1875 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
PCDHGB4Q9UN71 HIST1H2AI-201ENST00000358739 503 ntAPPRIS P1 BASIC16.32■□□□□ 0.2
PCDHGB4Q9UN71 AL355315.1-201ENST00000370649 1848 ntAPPRIS P1 TSL 2 BASIC16.32■□□□□ 0.2
PCDHGB4Q9UN71 MAGEA4-206ENST00000393921 1727 ntAPPRIS P1 TSL 5 BASIC16.32■□□□□ 0.2
PCDHGB4Q9UN71 HDAC11-204ENST00000404040 967 ntTSL 3 BASIC16.32■□□□□ 0.2
PCDHGB4Q9UN71 ABCG5-202ENST00000405322 2896 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
PCDHGB4Q9UN71 PLAC8-202ENST00000411416 786 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
PCDHGB4Q9UN71 AC126755.2-202ENST00000427999 1547 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
PCDHGB4Q9UN71 FAM53B-AS1-202ENST00000448422 1491 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
PCDHGB4Q9UN71 TSSC2-201ENST00000450217 709 ntBASIC16.32■□□□□ 0.2
PCDHGB4Q9UN71 EMB-204ENST00000508934 1617 ntAPPRIS ALT2 TSL 5 BASIC16.32■□□□□ 0.2
PCDHGB4Q9UN71 PTK2-216ENST00000519881 863 ntTSL 3 BASIC16.32■□□□□ 0.2
PCDHGB4Q9UN71 BACE1-211ENST00000528053 4083 ntTSL 5 BASIC16.32■□□□□ 0.2
PCDHGB4Q9UN71 ARSE-206ENST00000545496 2506 ntTSL 2 BASIC16.32■□□□□ 0.2
PCDHGB4Q9UN71 AC015712.1-203ENST00000559331 593 ntTSL 3 BASIC16.32■□□□□ 0.2
PCDHGB4Q9UN71 BRICD5-203ENST00000566018 555 ntTSL 2 BASIC16.32■□□□□ 0.2
PCDHGB4Q9UN71 TNNT1-204ENST00000585321 995 ntAPPRIS ALT2 TSL 5 BASIC16.32■□□□□ 0.2
PCDHGB4Q9UN71 GRIK5-204ENST00000593562 3308 ntAPPRIS P1 TSL 5 BASIC16.32■□□□□ 0.2
PCDHGB4Q9UN71 AXIN2-208ENST00000611991 1019 ntTSL 5 BASIC16.32■□□□□ 0.2
PCDHGB4Q9UN71 TBPL1-208ENST00000613034 1625 ntAPPRIS P1 TSL 2 BASIC16.32■□□□□ 0.2
PCDHGB4Q9UN71 LFNG-207ENST00000614382 1969 ntTSL 5 BASIC16.32■□□□□ 0.2
PCDHGB4Q9UN71 CFC1B-203ENST00000620207 1444 ntTSL 5 BASIC16.32■□□□□ 0.2
PCDHGB4Q9UN71 CFC1-203ENST00000621673 1444 ntTSL 2 BASIC16.32■□□□□ 0.2
PCDHGB4Q9UN71 PCDHGB2-202ENST00000622527 2588 ntAPPRIS P1 BASIC16.32■□□□□ 0.2
PCDHGB4Q9UN71 KCNE1B-204ENST00000623803 811 ntAPPRIS P2 TSL 1 (best) BASIC16.32■□□□□ 0.2
PCDHGB4Q9UN71 AL590326.2-201ENST00000625139 305 ntBASIC16.32■□□□□ 0.2
PCDHGB4Q9UN71 TP73-AS1-210ENST00000637775 1455 ntBASIC16.32■□□□□ 0.2
PCDHGB4Q9UN71 DNM1-208ENST00000486160 3181 ntAPPRIS ALT1 TSL 1 (best) BASIC16.32■□□□□ 0.2
PCDHGB4Q9UN71 CDC25B-203ENST00000344256 3071 ntTSL 2 BASIC16.32■□□□□ 0.2
PCDHGB4Q9UN71 PTBP1-202ENST00000350092 3069 ntAPPRIS ALT1 TSL 1 (best) BASIC16.32■□□□□ 0.2
PCDHGB4Q9UN71 LMAN1-201ENST00000251047 5521 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
PCDHGB4Q9UN71 PRLHR-201ENST00000239032 5446 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
PCDHGB4Q9UN71 BEGAIN-201ENST00000355173 2674 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
PCDHGB4Q9UN71 BCL11A-203ENST00000358510 2697 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
PCDHGB4Q9UN71 FUT7-201ENST00000314412 2584 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
PCDHGB4Q9UN71 AL365203.3-201ENST00000609742 2057 ntBASIC16.31■□□□□ 0.2
PCDHGB4Q9UN71 OSBPL1A-203ENST00000399441 1887 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
PCDHGB4Q9UN71 CFAP77-201ENST00000343036 1818 ntAPPRIS P3 TSL 2 BASIC16.31■□□□□ 0.2
PCDHGB4Q9UN71 ALG12-201ENST00000330817 5350 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
PCDHGB4Q9UN71 USP3-AS1-201ENST00000558831 1784 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
PCDHGB4Q9UN71 GGT6-203ENST00000573591 1730 ntTSL 4 BASIC16.31■□□□□ 0.2
PCDHGB4Q9UN71 CPSF4-201ENST00000292476 1691 ntAPPRIS P3 TSL 1 (best) BASIC16.31■□□□□ 0.2
PCDHGB4Q9UN71 NSDHL-203ENST00000440023 1630 ntAPPRIS P2 TSL 5 BASIC16.31■□□□□ 0.2
PCDHGB4Q9UN71 PIR-202ENST00000380421 1539 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
PCDHGB4Q9UN71 APOA4-201ENST00000357780 1473 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
PCDHGB4Q9UN71 DDX42-208ENST00000578681 4337 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
PCDHGB4Q9UN71 AC233702.3-201ENST00000578656 1387 ntBASIC16.31■□□□□ 0.2
PCDHGB4Q9UN71 PLEKHA4-202ENST00000355496 2614 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
PCDHGB4Q9UN71 CCS-201ENST00000310190 942 ntTSL 5 BASIC16.31■□□□□ 0.2
PCDHGB4Q9UN71 PSMB8-202ENST00000374882 1124 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
PCDHGB4Q9UN71 MPIG6B-202ENST00000375805 668 ntAPPRIS ALT2 TSL 1 (best) BASIC16.31■□□□□ 0.2
PCDHGB4Q9UN71 AL513320.1-201ENST00000435049 622 ntTSL 3 BASIC16.31■□□□□ 0.2
PCDHGB4Q9UN71 AC113382.1-201ENST00000500267 1253 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
PCDHGB4Q9UN71 FAM86EP-206ENST00000510506 987 ntBASIC16.31■□□□□ 0.2
PCDHGB4Q9UN71 AC022424.1-201ENST00000512155 889 ntTSL 3 BASIC16.31■□□□□ 0.2
PCDHGB4Q9UN71 AC139749.1-201ENST00000534584 1094 ntTSL 3 BASIC16.31■□□□□ 0.2
PCDHGB4Q9UN71 AC009061.1-201ENST00000567261 475 ntTSL 3 BASIC16.31■□□□□ 0.2
PCDHGB4Q9UN71 SYT1-201ENST00000261205 4808 ntAPPRIS P3 TSL 1 (best) BASIC16.31■□□□□ 0.2
PCDHGB4Q9UN71 PLTP-205ENST00000477313 2255 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
PCDHGB4Q9UN71 MAGI1-202ENST00000402939 4389 ntAPPRIS ALT2 TSL 1 (best) BASIC16.31■□□□□ 0.2
PCDHGB4Q9UN71 ZNF713-202ENST00000429591 4339 ntAPPRIS P2 TSL 5 BASIC16.31■□□□□ 0.2
PCDHGB4Q9UN71 AC104640.1-201ENST00000562617 2109 ntBASIC16.31■□□□□ 0.2
PCDHGB4Q9UN71 ZMIZ2-202ENST00000309315 5144 ntAPPRIS P4 TSL 2 BASIC16.31■□□□□ 0.2
PCDHGB4Q9UN71 ITGB7-201ENST00000267082 2867 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
PCDHGB4Q9UN71 SIL1-201ENST00000265195 1895 ntAPPRIS P1 TSL 5 BASIC16.31■□□□□ 0.2
PCDHGB4Q9UN71 WRAP53-203ENST00000431639 1818 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Retrieved 100 of 98,524 protein–RNA pairs in 24.5 ms