Protein–RNA interactions for Protein: Q9NRR8

CDC42SE1, CDC42 small effector protein 1, humanhuman

Predictions only

Length 79 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42SE1Q9NRR8 MGLL-201ENST00000265052 4642 ntTSL 1 (best) BASIC8.51□□□□□ -1.05
CDC42SE1Q9NRR8 HSPB7-202ENST00000375718 2415 ntTSL 2 BASIC8.51□□□□□ -1.05
CDC42SE1Q9NRR8 SYNE3-201ENST00000334258 3275 ntAPPRIS P2 TSL 1 (best) BASIC8.51□□□□□ -1.05
CDC42SE1Q9NRR8 SDC1-202ENST00000381150 3291 ntAPPRIS P1 TSL 5 BASIC8.51□□□□□ -1.05
CDC42SE1Q9NRR8 AC005703.6-201ENST00000623265 1329 ntBASIC8.51□□□□□ -1.05
CDC42SE1Q9NRR8 SNX33-201ENST00000308527 8008 ntAPPRIS P1 TSL 1 (best) BASIC8.51□□□□□ -1.05
CDC42SE1Q9NRR8 C1QTNF1-203ENST00000354124 2714 ntAPPRIS P1 TSL 4 BASIC8.51□□□□□ -1.05
CDC42SE1Q9NRR8 BUD13-201ENST00000260210 2196 ntAPPRIS P3 TSL 1 (best) BASIC8.51□□□□□ -1.05
CDC42SE1Q9NRR8 ZCCHC14-201ENST00000268616 7102 ntAPPRIS P1 TSL 1 (best) BASIC8.51□□□□□ -1.05
CDC42SE1Q9NRR8 PLSCR3-213ENST00000576362 1605 ntTSL 3 BASIC8.51□□□□□ -1.05
CDC42SE1Q9NRR8 DOT1L-201ENST00000398665 7436 ntAPPRIS P1 TSL 1 (best) BASIC8.51□□□□□ -1.05
CDC42SE1Q9NRR8 SLC26A6-207ENST00000420764 2630 ntAPPRIS ALT1 TSL 1 (best) BASIC8.5□□□□□ -1.05
CDC42SE1Q9NRR8 SCLY-202ENST00000409736 1774 ntTSL 1 (best) BASIC8.5□□□□□ -1.05
CDC42SE1Q9NRR8 ALOX12P2-203ENST00000570921 1945 ntBASIC8.5□□□□□ -1.05
CDC42SE1Q9NRR8 EML1-203ENST00000334192 4064 ntTSL 5 BASIC8.5□□□□□ -1.05
CDC42SE1Q9NRR8 VCP-201ENST00000358901 4370 ntAPPRIS P1 TSL 1 (best) BASIC8.5□□□□□ -1.05
CDC42SE1Q9NRR8 TRPV4-204ENST00000536838 2514 ntTSL 1 (best) BASIC8.5□□□□□ -1.05
CDC42SE1Q9NRR8 NTSR1-201ENST00000370501 4132 ntAPPRIS P1 TSL 1 (best) BASIC8.5□□□□□ -1.05
CDC42SE1Q9NRR8 ENDOV-204ENST00000518137 2815 ntAPPRIS P1 TSL 2 BASIC8.5□□□□□ -1.05
CDC42SE1Q9NRR8 PLLP-201ENST00000219207 1512 ntAPPRIS P1 TSL 1 (best) BASIC8.5□□□□□ -1.05
CDC42SE1Q9NRR8 GPR20-201ENST00000377741 1515 ntAPPRIS P1 TSL 3 BASIC8.5□□□□□ -1.05
CDC42SE1Q9NRR8 GPR78-201ENST00000382487 1694 ntAPPRIS P1 TSL 1 (best) BASIC8.5□□□□□ -1.05
CDC42SE1Q9NRR8 USP28-214ENST00000545540 3431 ntTSL 2 BASIC8.5□□□□□ -1.05
CDC42SE1Q9NRR8 PHB-201ENST00000300408 1832 ntAPPRIS P1 TSL 1 (best) BASIC8.5□□□□□ -1.05
CDC42SE1Q9NRR8 NEAT1-201ENST00000499732 1811 ntTSL 2 BASIC8.5□□□□□ -1.05
CDC42SE1Q9NRR8 AC023024.2-201ENST00000623561 1993 ntBASIC8.5□□□□□ -1.05
CDC42SE1Q9NRR8 KCNJ11-204ENST00000528731 2146 ntTSL 1 (best) BASIC8.5□□□□□ -1.05
CDC42SE1Q9NRR8 AFDN-205ENST00000392108 6812 ntTSL 1 (best) BASIC8.5□□□□□ -1.05
CDC42SE1Q9NRR8 PLCD4-202ENST00000417849 2738 ntAPPRIS P2 TSL 5 BASIC8.5□□□□□ -1.05
CDC42SE1Q9NRR8 GJD2-201ENST00000290374 2889 ntAPPRIS P1 TSL 1 (best) BASIC8.5□□□□□ -1.05
CDC42SE1Q9NRR8 OFD1-201ENST00000340096 3611 ntAPPRIS P3 TSL 1 (best) BASIC8.5□□□□□ -1.05
CDC42SE1Q9NRR8 HCFC1-202ENST00000369984 8375 ntAPPRIS ALT2 TSL 5 BASIC8.5□□□□□ -1.05
CDC42SE1Q9NRR8 AC131212.3-201ENST00000624087 4219 ntBASIC8.5□□□□□ -1.05
CDC42SE1Q9NRR8 PLA2G4F-202ENST00000397272 5587 ntAPPRIS P1 TSL 1 (best) BASIC8.5□□□□□ -1.05
CDC42SE1Q9NRR8 SNAI2-201ENST00000020945 2010 ntAPPRIS P1 TSL 1 (best) BASIC8.5□□□□□ -1.05
CDC42SE1Q9NRR8 CCDC117-201ENST00000249064 3985 ntAPPRIS P1 TSL 1 (best) BASIC8.5□□□□□ -1.05
CDC42SE1Q9NRR8 MTX1-201ENST00000316721 1441 ntTSL 1 (best) BASIC8.5□□□□□ -1.05
CDC42SE1Q9NRR8 SNCG-201ENST00000348795 684 ntTSL 2 BASIC8.5□□□□□ -1.05
CDC42SE1Q9NRR8 IFI6-202ENST00000361157 841 ntAPPRIS ALT2 TSL 1 (best) BASIC8.5□□□□□ -1.05
CDC42SE1Q9NRR8 GJB1-203ENST00000374029 1587 ntAPPRIS P1 TSL 5 BASIC8.5□□□□□ -1.05
CDC42SE1Q9NRR8 HDAC11-206ENST00000405025 576 ntTSL 4 BASIC8.5□□□□□ -1.05
CDC42SE1Q9NRR8 SEC24D-202ENST00000419654 2786 ntTSL 5 BASIC8.5□□□□□ -1.05
CDC42SE1Q9NRR8 AC244197.3-201ENST00000422081 2635 ntAPPRIS P1 TSL 2 BASIC8.5□□□□□ -1.05
CDC42SE1Q9NRR8 KRT8P20-201ENST00000423953 1409 ntBASIC8.5□□□□□ -1.05
CDC42SE1Q9NRR8 CDK12-201ENST00000430627 5918 ntAPPRIS ALT1 TSL 1 (best) BASIC8.5□□□□□ -1.05
CDC42SE1Q9NRR8 MAGED4B-211ENST00000497164 2482 ntAPPRIS P3 TSL 1 (best) BASIC8.5□□□□□ -1.05
CDC42SE1Q9NRR8 CCDC149-203ENST00000502801 1079 ntTSL 1 (best) BASIC8.5□□□□□ -1.05
CDC42SE1Q9NRR8 POLR2E-211ENST00000612655 1749 ntAPPRIS P1 TSL 3 BASIC8.5□□□□□ -1.05
CDC42SE1Q9NRR8 CR559946.2-201ENST00000623684 991 ntBASIC8.5□□□□□ -1.05
CDC42SE1Q9NRR8 SLC46A1-207ENST00000612814 6376 ntAPPRIS P1 TSL 2 BASIC8.5□□□□□ -1.05
CDC42SE1Q9NRR8 SIRPA-203ENST00000400068 4201 ntAPPRIS P3 TSL 1 (best) BASIC8.5□□□□□ -1.05
CDC42SE1Q9NRR8 HAGLR-202ENST00000416928 4235 ntTSL 1 (best) BASIC8.5□□□□□ -1.05
CDC42SE1Q9NRR8 AC009093.1-201ENST00000566070 2099 ntTSL 1 (best) BASIC8.5□□□□□ -1.05
CDC42SE1Q9NRR8 KCNH4-201ENST00000264661 3920 ntAPPRIS P1 TSL 1 (best) BASIC8.5□□□□□ -1.05
CDC42SE1Q9NRR8 ACTL6A-202ENST00000429709 1901 ntAPPRIS P1 TSL 1 (best) BASIC8.5□□□□□ -1.05
CDC42SE1Q9NRR8 RIOK3-203ENST00000577501 1904 ntAPPRIS ALT1 TSL 1 (best) BASIC8.5□□□□□ -1.05
CDC42SE1Q9NRR8 UQCRFS1-201ENST00000304863 3475 ntAPPRIS P1 TSL 1 (best) BASIC8.5□□□□□ -1.05
CDC42SE1Q9NRR8 NLGN3-206ENST00000612180 3319 ntTSL 5 BASIC8.5□□□□□ -1.05
CDC42SE1Q9NRR8 PEAR1-201ENST00000292357 4866 ntAPPRIS P1 TSL 5 BASIC8.5□□□□□ -1.05
CDC42SE1Q9NRR8 NRXN1-259ENST00000637511 3651 ntTSL 5 BASIC8.5□□□□□ -1.05
CDC42SE1Q9NRR8 PCDHGA11-201ENST00000398587 4647 ntAPPRIS P3 TSL 1 (best) BASIC8.5□□□□□ -1.05
CDC42SE1Q9NRR8 TTC14-202ENST00000382584 2274 ntTSL 1 (best) BASIC8.5□□□□□ -1.05
CDC42SE1Q9NRR8 CIPC-201ENST00000361786 4486 ntAPPRIS P1 TSL 1 (best) BASIC8.5□□□□□ -1.05
CDC42SE1Q9NRR8 MYO9B-206ENST00000595618 7623 ntTSL 1 (best) BASIC8.5□□□□□ -1.05
CDC42SE1Q9NRR8 FCMR-201ENST00000367091 1950 ntAPPRIS P3 TSL 1 (best) BASIC8.5□□□□□ -1.05
CDC42SE1Q9NRR8 LTK-204ENST00000561619 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC8.5□□□□□ -1.05
CDC42SE1Q9NRR8 PSEN2-201ENST00000366782 2465 ntTSL 1 (best) BASIC8.49□□□□□ -1.05
CDC42SE1Q9NRR8 AC136621.1-201ENST00000624017 2304 ntBASIC8.49□□□□□ -1.05
CDC42SE1Q9NRR8 MAGI2-218ENST00000630991 2349 ntTSL 2 BASIC8.49□□□□□ -1.05
CDC42SE1Q9NRR8 TMPRSS5-209ENST00000544634 1524 ntTSL 2 BASIC8.49□□□□□ -1.05
CDC42SE1Q9NRR8 SAR1A-204ENST00000373241 2996 ntAPPRIS P1 TSL 1 (best) BASIC8.49□□□□□ -1.05
CDC42SE1Q9NRR8 SLC26A8-201ENST00000355574 3463 ntAPPRIS P1 TSL 2 BASIC8.49□□□□□ -1.05
CDC42SE1Q9NRR8 RAD51-210ENST00000557850 1397 ntTSL 2 BASIC8.49□□□□□ -1.05
CDC42SE1Q9NRR8 HLA-A-202ENST00000376806 1854 ntBASIC8.49□□□□□ -1.05
CDC42SE1Q9NRR8 LSP1-217ENST00000612798 1881 ntAPPRIS ALT2 TSL 2 BASIC8.49□□□□□ -1.05
CDC42SE1Q9NRR8 ARHGAP45-202ENST00000539243 4184 ntAPPRIS ALT2 TSL 2 BASIC8.49□□□□□ -1.05
CDC42SE1Q9NRR8 MYC-202ENST00000377970 2351 ntAPPRIS ALT2 TSL 1 (best) BASIC8.49□□□□□ -1.05
CDC42SE1Q9NRR8 KDELR1-201ENST00000330720 1557 ntAPPRIS P1 TSL 1 (best) BASIC8.49□□□□□ -1.05
CDC42SE1Q9NRR8 KCNK7-203ENST00000394216 1563 ntTSL 1 (best) BASIC8.49□□□□□ -1.05
CDC42SE1Q9NRR8 WDR25-204ENST00000554175 2055 ntTSL 1 (best) BASIC8.49□□□□□ -1.05
CDC42SE1Q9NRR8 YTHDF3-209ENST00000617200 5076 ntTSL 5 BASIC8.49□□□□□ -1.05
CDC42SE1Q9NRR8 MAOA-204ENST00000542639 5438 ntTSL 2 BASIC8.49□□□□□ -1.05
CDC42SE1Q9NRR8 GPRC5C-204ENST00000392629 1419 ntAPPRIS ALT2 TSL 1 (best) BASIC8.49□□□□□ -1.05
CDC42SE1Q9NRR8 BEGAIN-212ENST00000637716 3259 ntAPPRIS P5 TSL 5 BASIC8.49□□□□□ -1.05
CDC42SE1Q9NRR8 FES-207ENST00000444422 2266 ntTSL 1 (best) BASIC8.49□□□□□ -1.05
CDC42SE1Q9NRR8 RPS6KA4-201ENST00000334205 3119 ntAPPRIS P3 TSL 1 (best) BASIC8.49□□□□□ -1.05
CDC42SE1Q9NRR8 C19orf44-203ENST00000594035 2609 ntAPPRIS ALT2 TSL 1 (best) BASIC8.49□□□□□ -1.05
CDC42SE1Q9NRR8 VIPR2-204ENST00000421760 717 ntTSL 3 BASIC8.49□□□□□ -1.05
CDC42SE1Q9NRR8 CXXC5-AS1-201ENST00000514287 577 ntTSL 4 BASIC8.49□□□□□ -1.05
CDC42SE1Q9NRR8 LRRK1-208ENST00000532029 1241 ntTSL 1 (best) BASIC8.49□□□□□ -1.05
CDC42SE1Q9NRR8 C16orf95-205ENST00000567970 1031 ntAPPRIS ALT2 TSL 5 BASIC8.49□□□□□ -1.05
CDC42SE1Q9NRR8 RARRES2P11-201ENST00000635158 484 ntBASIC8.49□□□□□ -1.05
CDC42SE1Q9NRR8 AJ011931.1-201ENST00000618749 2492 ntBASIC8.49□□□□□ -1.05
CDC42SE1Q9NRR8 SERPINB6-201ENST00000335686 1604 ntAPPRIS P1 TSL 1 (best) BASIC8.49□□□□□ -1.05
CDC42SE1Q9NRR8 NLRP2B-201ENST00000434992 3194 ntAPPRIS P1 BASIC8.49□□□□□ -1.05
CDC42SE1Q9NRR8 TDRD5-201ENST00000294848 3525 ntAPPRIS P3 TSL 1 (best) BASIC8.49□□□□□ -1.05
CDC42SE1Q9NRR8 CNTN1-203ENST00000547702 3033 ntTSL 2 BASIC8.49□□□□□ -1.05
CDC42SE1Q9NRR8 AC092535.1-201ENST00000417557 2165 ntTSL 2 BASIC8.49□□□□□ -1.05
CDC42SE1Q9NRR8 ICE1-201ENST00000296564 7927 ntAPPRIS P2 TSL 1 (best) BASIC8.49□□□□□ -1.05
CDC42SE1Q9NRR8 TDRD12-202ENST00000444215 3934 ntAPPRIS P1 TSL 1 (best) BASIC8.49□□□□□ -1.05
Retrieved 100 of 98,524 protein–RNA pairs in 80.6 ms