Protein–RNA interactions for Protein: Q9NQS3

NECTIN3, Nectin-3, humanhuman

Predictions only

Length 549 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NECTIN3Q9NQS3 LMBR1-202ENST00000359422 4727 ntTSL 5 BASIC16.13■□□□□ 0.17
NECTIN3Q9NQS3 AHRR-201ENST00000316418 5661 ntAPPRIS P3 TSL 1 (best) BASIC16.13■□□□□ 0.17
NECTIN3Q9NQS3 NFATC4-210ENST00000554050 3057 ntAPPRIS ALT2 TSL 1 (best) BASIC16.13■□□□□ 0.17
NECTIN3Q9NQS3 CRELD1-206ENST00000452070 1778 ntAPPRIS P1 TSL 2 BASIC16.13■□□□□ 0.17
NECTIN3Q9NQS3 DDX19B-207ENST00000563206 1765 ntTSL 5 BASIC16.13■□□□□ 0.17
NECTIN3Q9NQS3 SLX1A-SULT1A3-202ENST00000565342 2195 ntTSL 2 BASIC16.13■□□□□ 0.17
NECTIN3Q9NQS3 TCOF1-206ENST00000445265 4825 ntAPPRIS ALT2 TSL 5 BASIC16.13■□□□□ 0.17
NECTIN3Q9NQS3 SHTN1-202ENST00000355371 5361 ntAPPRIS ALT1 TSL 2 BASIC16.13■□□□□ 0.17
NECTIN3Q9NQS3 ARL15-201ENST00000502271 3248 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
NECTIN3Q9NQS3 PLGRKT-201ENST00000223864 932 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
NECTIN3Q9NQS3 ADIPOR1-202ENST00000367254 1116 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
NECTIN3Q9NQS3 HLA-DMA-201ENST00000374843 1123 ntAPPRIS P1 BASIC16.13■□□□□ 0.17
NECTIN3Q9NQS3 PDHA1-203ENST00000379805 734 ntTSL 2 BASIC16.13■□□□□ 0.17
NECTIN3Q9NQS3 NABP1-203ENST00000409510 843 ntTSL 5 BASIC16.13■□□□□ 0.17
NECTIN3Q9NQS3 PITPNA-AS1-201ENST00000425081 542 ntTSL 2 BASIC16.13■□□□□ 0.17
NECTIN3Q9NQS3 AL645941.2-201ENST00000429234 612 ntAPPRIS P1 TSL 2 BASIC16.13■□□□□ 0.17
NECTIN3Q9NQS3 AC091182.1-202ENST00000518765 713 ntTSL 2 BASIC16.13■□□□□ 0.17
NECTIN3Q9NQS3 PGM5P2-202ENST00000637225 1043 ntBASIC16.13■□□□□ 0.17
NECTIN3Q9NQS3 AL805961.1-202ENST00000641562 540 ntBASIC16.13■□□□□ 0.17
NECTIN3Q9NQS3 TVP23C-204ENST00000438826 1852 ntAPPRIS ALT1 TSL 1 (best) BASIC16.13■□□□□ 0.17
NECTIN3Q9NQS3 C17orf62-201ENST00000306645 2093 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
NECTIN3Q9NQS3 GDF6-201ENST00000287020 3701 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
NECTIN3Q9NQS3 BBS7-204ENST00000506636 2570 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
NECTIN3Q9NQS3 RHBG-204ENST00000537040 1789 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
NECTIN3Q9NQS3 USP3-AS1-201ENST00000558831 1784 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
NECTIN3Q9NQS3 TNFRSF13B-201ENST00000261652 1357 ntAPPRIS P2 TSL 1 (best) BASIC16.13■□□□□ 0.17
NECTIN3Q9NQS3 HMGN1-204ENST00000380749 1383 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
NECTIN3Q9NQS3 HFE2-204ENST00000475797 1381 ntTSL 2 BASIC16.13■□□□□ 0.17
NECTIN3Q9NQS3 FOXP3-206ENST00000557224 1371 ntTSL 2 BASIC16.13■□□□□ 0.17
NECTIN3Q9NQS3 IRF8-203ENST00000563180 1394 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
NECTIN3Q9NQS3 PURB-201ENST00000395699 9069 ntAPPRIS P1 BASIC16.12■□□□□ 0.17
NECTIN3Q9NQS3 CAP2-202ENST00000378990 1812 ntTSL 2 BASIC16.12■□□□□ 0.17
NECTIN3Q9NQS3 MAPK7-201ENST00000299612 2715 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
NECTIN3Q9NQS3 DMKN-209ENST00000429837 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC16.12■□□□□ 0.17
NECTIN3Q9NQS3 AC104109.2-201ENST00000602919 1418 ntBASIC16.12■□□□□ 0.17
NECTIN3Q9NQS3 RPN1-201ENST00000296255 2314 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
NECTIN3Q9NQS3 SNAPC4-201ENST00000298532 5010 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
NECTIN3Q9NQS3 ELN-221ENST00000445912 2583 ntAPPRIS ALT2 TSL 2 BASIC16.12■□□□□ 0.17
NECTIN3Q9NQS3 PIGQ-201ENST00000026218 2846 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
NECTIN3Q9NQS3 TRIM17-201ENST00000295033 1730 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
NECTIN3Q9NQS3 TRIM7-203ENST00000393315 2851 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
NECTIN3Q9NQS3 SYS1-202ENST00000372727 813 ntAPPRIS P1 TSL 3 BASIC16.12■□□□□ 0.17
NECTIN3Q9NQS3 HMGN1-203ENST00000380748 829 ntTSL 3 BASIC16.12■□□□□ 0.17
NECTIN3Q9NQS3 IGKV4-1-201ENST00000390243 538 ntAPPRIS P1 BASIC16.12■□□□□ 0.17
NECTIN3Q9NQS3 OTOS-202ENST00000391989 645 ntAPPRIS P1 TSL 3 BASIC16.12■□□□□ 0.17
NECTIN3Q9NQS3 TIMM17B-202ENST00000396779 1099 ntTSL 5 BASIC16.12■□□□□ 0.17
NECTIN3Q9NQS3 SATB1-AS1-201ENST00000414198 737 ntTSL 2 BASIC16.12■□□□□ 0.17
NECTIN3Q9NQS3 AC010226.1-202ENST00000508517 539 ntTSL 2 BASIC16.12■□□□□ 0.17
NECTIN3Q9NQS3 C1QB-203ENST00000509305 1254 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
NECTIN3Q9NQS3 AC011530.1-201ENST00000593999 558 ntTSL 2 BASIC16.12■□□□□ 0.17
NECTIN3Q9NQS3 TUBB4A-209ENST00000598006 565 ntTSL 2 BASIC16.12■□□□□ 0.17
NECTIN3Q9NQS3 SBDS-205ENST00000617799 953 ntAPPRIS ALT1 TSL 5 BASIC16.12■□□□□ 0.17
NECTIN3Q9NQS3 LINC01666-201ENST00000623794 845 ntTSL 5 BASIC16.12■□□□□ 0.17
NECTIN3Q9NQS3 FAM184B-201ENST00000265018 6622 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
NECTIN3Q9NQS3 SCP2-204ENST00000407246 2239 ntTSL 2 BASIC16.12■□□□□ 0.17
NECTIN3Q9NQS3 TXNRD2-214ENST00000491939 2238 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
NECTIN3Q9NQS3 RAB33B-201ENST00000305626 4562 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
NECTIN3Q9NQS3 KCNJ10-208ENST00000639408 1546 ntTSL 5 BASIC16.12■□□□□ 0.17
NECTIN3Q9NQS3 SLC4A3-204ENST00000373760 4134 ntAPPRIS P1 TSL 5 BASIC16.12■□□□□ 0.17
NECTIN3Q9NQS3 SQOR-208ENST00000568606 1792 ntAPPRIS P1 TSL 5 BASIC16.12■□□□□ 0.17
NECTIN3Q9NQS3 SUSD4-202ENST00000343846 3480 ntAPPRIS P1 TSL 2 BASIC16.12■□□□□ 0.17
NECTIN3Q9NQS3 PDCL3-201ENST00000264254 1337 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
NECTIN3Q9NQS3 FOXP3-201ENST00000376197 1326 ntTSL 2 BASIC16.12■□□□□ 0.17
NECTIN3Q9NQS3 PUF60-201ENST00000313352 1804 ntAPPRIS ALT1 TSL 1 (best) BASIC16.12■□□□□ 0.17
NECTIN3Q9NQS3 SLC9A6-203ENST00000370701 4755 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
NECTIN3Q9NQS3 SPATS2L-202ENST00000360760 2119 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
NECTIN3Q9NQS3 PCNX2-201ENST00000258229 7518 ntAPPRIS P2 TSL 5 BASIC16.12■□□□□ 0.17
NECTIN3Q9NQS3 TRPV4-205ENST00000537083 2436 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
NECTIN3Q9NQS3 MFGE8-201ENST00000268150 1937 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
NECTIN3Q9NQS3 GOLGA7-202ENST00000405786 1903 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
NECTIN3Q9NQS3 SMO-201ENST00000249373 3738 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
NECTIN3Q9NQS3 TAPBP-238ENST00000475304 1686 ntAPPRIS ALT2 TSL 5 BASIC16.11■□□□□ 0.17
NECTIN3Q9NQS3 ZNF133-204ENST00000396026 2717 ntAPPRIS P3 TSL 3 BASIC16.11■□□□□ 0.17
NECTIN3Q9NQS3 ASPH-211ENST00000518068 2744 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
NECTIN3Q9NQS3 ZNF496-201ENST00000294753 5336 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
NECTIN3Q9NQS3 CBX8-201ENST00000269385 3791 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
NECTIN3Q9NQS3 RNF7-201ENST00000273480 2763 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
NECTIN3Q9NQS3 FGFR2-215ENST00000457416 3061 ntAPPRIS P3 TSL 1 (best) BASIC16.11■□□□□ 0.17
NECTIN3Q9NQS3 CACNA1G-201ENST00000352832 7848 ntAPPRIS ALT2 TSL 1 (best) BASIC16.11■□□□□ 0.17
NECTIN3Q9NQS3 RUNDC3B-203ENST00000394654 2064 ntAPPRIS P4 TSL 2 BASIC16.11■□□□□ 0.17
NECTIN3Q9NQS3 CES1-202ENST00000361503 1835 ntAPPRIS ALT1 TSL 1 (best) BASIC16.11■□□□□ 0.17
NECTIN3Q9NQS3 SPRED2-206ENST00000443619 1800 ntAPPRIS P1 TSL 2 BASIC16.11■□□□□ 0.17
NECTIN3Q9NQS3 AP002414.1-201ENST00000391405 1147 ntBASIC16.11■□□□□ 0.17
NECTIN3Q9NQS3 ODF3B-204ENST00000405135 917 ntTSL 5 BASIC16.11■□□□□ 0.17
NECTIN3Q9NQS3 AC009947.1-201ENST00000444350 727 ntBASIC16.11■□□□□ 0.17
NECTIN3Q9NQS3 C9orf147-204ENST00000463223 863 ntTSL 3 BASIC16.11■□□□□ 0.17
NECTIN3Q9NQS3 MIR130B-201ENST00000498589 1093 ntTSL 5 BASIC16.11■□□□□ 0.17
NECTIN3Q9NQS3 BAX-213ENST00000539787 458 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
NECTIN3Q9NQS3 FGFR1OP2-206ENST00000546072 956 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
NECTIN3Q9NQS3 AC145285.3-201ENST00000564603 959 ntBASIC16.11■□□□□ 0.17
NECTIN3Q9NQS3 AC106730.1-201ENST00000566722 1090 ntBASIC16.11■□□□□ 0.17
NECTIN3Q9NQS3 AC055811.1-201ENST00000584203 1231 ntTSL 5 BASIC16.11■□□□□ 0.17
NECTIN3Q9NQS3 AC008667.4-201ENST00000607370 168 ntBASIC16.11■□□□□ 0.17
NECTIN3Q9NQS3 HMGN3-203ENST00000620514 1010 ntTSL 3 BASIC16.11■□□□□ 0.17
NECTIN3Q9NQS3 IQSEC2-210ENST00000639161 936 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
NECTIN3Q9NQS3 TBC1D1-203ENST00000402522 1567 ntTSL 2 BASIC16.11■□□□□ 0.17
NECTIN3Q9NQS3 SSPN-201ENST00000242729 2788 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
NECTIN3Q9NQS3 BMI1-201ENST00000376663 3428 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
NECTIN3Q9NQS3 EPHX2-204ENST00000518379 1959 ntAPPRIS ALT2 TSL 5 BASIC16.11■□□□□ 0.17
NECTIN3Q9NQS3 SERTM1-201ENST00000315190 3207 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Retrieved 100 of 98,524 protein–RNA pairs in 36.6 ms