Protein–RNA interactions for Protein: Q96PB1

CASD1, N-acetylneuraminate 9-O-acetyltransferase, humanhuman

Predictions only

Length 797 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CASD1Q96PB1 HDAC8-203ENST00000373559 632 ntTSL 2 BASIC17.72■□□□□ 0.43
CASD1Q96PB1 HDAC8-208ENST00000373583 434 ntTSL 5 BASIC17.72■□□□□ 0.43
CASD1Q96PB1 CUTA-202ENST00000374496 762 ntAPPRIS P3 TSL 5 BASIC17.72■□□□□ 0.43
CASD1Q96PB1 AL080243.2-201ENST00000418783 582 ntBASIC17.72■□□□□ 0.43
CASD1Q96PB1 LINC01160-201ENST00000441004 768 ntTSL 3 BASIC17.72■□□□□ 0.43
CASD1Q96PB1 FAM86HP-203ENST00000511564 521 ntTSL 2 BASIC17.72■□□□□ 0.43
CASD1Q96PB1 MAPKAPK5-203ENST00000547305 494 ntTSL 2 BASIC17.72■□□□□ 0.43
CASD1Q96PB1 AC040162.1-202ENST00000573493 573 ntAPPRIS P1 TSL 3 BASIC17.72■□□□□ 0.43
CASD1Q96PB1 SRP9-204ENST00000619790 377 ntTSL 2 BASIC17.72■□□□□ 0.43
CASD1Q96PB1 FKBP4-208ENST00000630279 156 ntTSL 5 BASIC17.72■□□□□ 0.43
CASD1Q96PB1 AC004840.1-201ENST00000636359 365 ntBASIC17.72■□□□□ 0.43
CASD1Q96PB1 ZNF668-202ENST00000394983 2717 ntAPPRIS P1 TSL 5 BASIC17.72■□□□□ 0.43
CASD1Q96PB1 ATP5B-201ENST00000262030 1839 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
CASD1Q96PB1 LTBP3-202ENST00000322147 4046 ntAPPRIS P3 TSL 1 (best) BASIC17.72■□□□□ 0.43
CASD1Q96PB1 CDK2-204ENST00000553376 1725 ntTSL 5 BASIC17.72■□□□□ 0.43
CASD1Q96PB1 AL512652.2-201ENST00000625156 1716 ntBASIC17.72■□□□□ 0.43
CASD1Q96PB1 SDCBP2-202ENST00000360779 1519 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
CASD1Q96PB1 LTA-214ENST00000454783 1507 ntAPPRIS P1 TSL 2 BASIC17.72■□□□□ 0.43
CASD1Q96PB1 DEF6-201ENST00000316637 2262 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
CASD1Q96PB1 TMEM25-202ENST00000354064 1965 ntTSL 2 BASIC17.71■□□□□ 0.43
CASD1Q96PB1 C2orf54-203ENST00000402775 1958 ntAPPRIS ALT2 TSL 2 BASIC17.71■□□□□ 0.43
CASD1Q96PB1 C21orf58-203ENST00000397680 2624 ntAPPRIS ALT2 TSL 2 BASIC17.71■□□□□ 0.43
CASD1Q96PB1 MIER1-204ENST00000371012 2420 ntTSL 2 BASIC17.71■□□□□ 0.43
CASD1Q96PB1 YAP1-201ENST00000282441 5386 ntAPPRIS P3 TSL 1 (best) BASIC17.71■□□□□ 0.43
CASD1Q96PB1 AP003356.1-202ENST00000517910 2770 ntTSL 2 BASIC17.71■□□□□ 0.43
CASD1Q96PB1 C19orf25-207ENST00000588871 2128 ntTSL 5 BASIC17.71■□□□□ 0.43
CASD1Q96PB1 DNAJC7-201ENST00000316603 1468 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
CASD1Q96PB1 MYOD1-201ENST00000250003 1801 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
CASD1Q96PB1 VCX2-201ENST00000317103 815 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
CASD1Q96PB1 RBM3-202ENST00000376755 1130 ntAPPRIS P1 TSL 2 BASIC17.71■□□□□ 0.43
CASD1Q96PB1 SNRPB-201ENST00000381342 1154 ntAPPRIS ALT1 TSL 1 (best) BASIC17.71■□□□□ 0.43
CASD1Q96PB1 CSHL1-204ENST00000392824 823 ntAPPRIS ALT1 TSL 1 (best) BASIC17.71■□□□□ 0.43
CASD1Q96PB1 LRP5L-201ENST00000402785 1193 ntAPPRIS P2 TSL 1 (best) BASIC17.71■□□□□ 0.43
CASD1Q96PB1 CENPM-206ENST00000407253 818 ntTSL 2 BASIC17.71■□□□□ 0.43
CASD1Q96PB1 PABPN1L-202ENST00000419291 1272 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
CASD1Q96PB1 RPUSD3-204ENST00000424438 1005 ntTSL 2 BASIC17.71■□□□□ 0.43
CASD1Q96PB1 SNRPB-202ENST00000438552 1008 ntAPPRIS P4 TSL 1 (best) BASIC17.71■□□□□ 0.43
CASD1Q96PB1 AC093724.1-201ENST00000448659 1027 ntBASIC17.71■□□□□ 0.43
CASD1Q96PB1 RN7SL692P-201ENST00000464677 288 ntBASIC17.71■□□□□ 0.43
CASD1Q96PB1 GNG4-205ENST00000484517 684 ntAPPRIS P1 TSL 2 BASIC17.71■□□□□ 0.43
CASD1Q96PB1 AC013565.3-201ENST00000565547 450 ntTSL 3 BASIC17.71■□□□□ 0.43
CASD1Q96PB1 ARMC7-205ENST00000584947 445 ntTSL 3 BASIC17.71■□□□□ 0.43
CASD1Q96PB1 VAT1-205ENST00000587173 1174 ntTSL 2 BASIC17.71■□□□□ 0.43
CASD1Q96PB1 AC012615.6-204ENST00000587741 477 ntTSL 3 BASIC17.71■□□□□ 0.43
CASD1Q96PB1 VCX-203ENST00000620630 812 ntAPPRIS ALT2 TSL 5 BASIC17.71■□□□□ 0.43
CASD1Q96PB1 RAB40C-203ENST00000535977 2717 ntAPPRIS P1 TSL 5 BASIC17.71■□□□□ 0.43
CASD1Q96PB1 PCDHA8-201ENST00000378123 2616 ntAPPRIS ALT2 BASIC17.71■□□□□ 0.43
CASD1Q96PB1 MAFK-201ENST00000343242 3368 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
CASD1Q96PB1 KCNA3-201ENST00000369769 2569 ntAPPRIS P1 BASIC17.71■□□□□ 0.43
CASD1Q96PB1 LSP1-203ENST00000405957 1785 ntAPPRIS ALT2 TSL 5 BASIC17.71■□□□□ 0.43
CASD1Q96PB1 TLE4-205ENST00000376544 4871 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
CASD1Q96PB1 PTPRJ-207ENST00000613246 7851 ntAPPRIS ALT2 TSL 5 BASIC17.71■□□□□ 0.42
CASD1Q96PB1 TRIM8-201ENST00000302424 2831 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.42
CASD1Q96PB1 NBPF9-209ENST00000621645 5632 ntAPPRIS ALT2 TSL 2 BASIC17.7■□□□□ 0.42
CASD1Q96PB1 SLC30A2-202ENST00000374278 3097 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
CASD1Q96PB1 FGFR3-205ENST00000440486 4287 ntAPPRIS P3 TSL 5 BASIC17.7■□□□□ 0.42
CASD1Q96PB1 KIF16B-206ENST00000636835 5109 ntAPPRIS ALT2 TSL 1 (best) BASIC17.7■□□□□ 0.42
CASD1Q96PB1 ZNF280B-203ENST00000626650 5721 ntAPPRIS P1 TSL 2 BASIC17.7■□□□□ 0.42
CASD1Q96PB1 MAN1A1-201ENST00000368468 5014 ntAPPRIS P1 TSL 2 BASIC17.7■□□□□ 0.42
CASD1Q96PB1 MFNG-201ENST00000356998 2088 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
CASD1Q96PB1 NAGPA-201ENST00000312251 2202 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
CASD1Q96PB1 IQSEC1-201ENST00000273221 5279 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
CASD1Q96PB1 THOC7-201ENST00000295899 990 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
CASD1Q96PB1 UBB-201ENST00000302182 1225 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
CASD1Q96PB1 AL645728.1-201ENST00000366221 2101 ntBASIC17.7■□□□□ 0.42
CASD1Q96PB1 FCRLB-204ENST00000367946 1152 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
CASD1Q96PB1 NDUFB8-202ENST00000370320 684 ntTSL 3 BASIC17.7■□□□□ 0.42
CASD1Q96PB1 CIB3-202ENST00000379859 467 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
CASD1Q96PB1 IGHV3-23-201ENST00000390609 432 ntAPPRIS P1 BASIC17.7■□□□□ 0.42
CASD1Q96PB1 COX5BP8-201ENST00000416911 349 ntBASIC17.7■□□□□ 0.42
CASD1Q96PB1 AL162431.1-201ENST00000434447 543 ntTSL 3 BASIC17.7■□□□□ 0.42
CASD1Q96PB1 RPSAP31-202ENST00000445165 716 ntTSL 2 BASIC17.7■□□□□ 0.42
CASD1Q96PB1 MAGI2-AS3-208ENST00000446159 670 ntTSL 3 BASIC17.7■□□□□ 0.42
CASD1Q96PB1 CDK4-206ENST00000549606 558 ntTSL 2 BASIC17.7■□□□□ 0.42
CASD1Q96PB1 SPATA8-AS1-201ENST00000558722 465 ntTSL 3 BASIC17.7■□□□□ 0.42
CASD1Q96PB1 SSH2-210ENST00000582084 560 ntTSL 3 BASIC17.7■□□□□ 0.42
CASD1Q96PB1 IER3IP1-202ENST00000639845 832 ntTSL 2 BASIC17.7■□□□□ 0.42
CASD1Q96PB1 STK32C-204ENST00000368622 2010 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
CASD1Q96PB1 KCTD12-201ENST00000377474 6225 ntAPPRIS P1 BASIC17.7■□□□□ 0.42
CASD1Q96PB1 STRN3-202ENST00000357479 2799 ntAPPRIS P1 TSL 5 BASIC17.7■□□□□ 0.42
CASD1Q96PB1 GPR152-201ENST00000312457 1429 ntAPPRIS P1 BASIC17.7■□□□□ 0.42
CASD1Q96PB1 ANXA4-202ENST00000409920 1414 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
CASD1Q96PB1 CLEC18C-201ENST00000314151 1934 ntAPPRIS P2 TSL 1 (best) BASIC17.7■□□□□ 0.42
CASD1Q96PB1 CLEC18A-208ENST00000568461 1934 ntAPPRIS P2 TSL 1 (best) BASIC17.7■□□□□ 0.42
CASD1Q96PB1 EFR3A-201ENST00000254624 5438 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
CASD1Q96PB1 AL133373.2-201ENST00000623187 2828 ntBASIC17.7■□□□□ 0.42
CASD1Q96PB1 PRDM5-203ENST00000428209 2338 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
CASD1Q96PB1 INPP5J-213ENST00000620191 2306 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
CASD1Q96PB1 PPP2R2B-203ENST00000394411 2071 ntAPPRIS P1 TSL 2 BASIC17.7■□□□□ 0.42
CASD1Q96PB1 AC141586.5-201ENST00000624546 2050 ntBASIC17.7■□□□□ 0.42
CASD1Q96PB1 SDR16C5-201ENST00000303749 1840 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
CASD1Q96PB1 TEAD3-204ENST00000639578 1308 ntAPPRIS P2 TSL 1 (best) BASIC17.7■□□□□ 0.42
CASD1Q96PB1 C3orf70-201ENST00000335012 5901 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
CASD1Q96PB1 CDIP1-206ENST00000563507 1463 ntTSL 2 BASIC17.69■□□□□ 0.42
CASD1Q96PB1 RAB4A-205ENST00000618010 2799 ntTSL 3 BASIC17.69■□□□□ 0.42
CASD1Q96PB1 PHGDH-202ENST00000369409 1882 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
CASD1Q96PB1 LBX2-AS1-201ENST00000548978 1852 ntTSL 3 BASIC17.69■□□□□ 0.42
CASD1Q96PB1 FAM174A-201ENST00000312637 1356 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
CASD1Q96PB1 DZANK1-202ENST00000329494 1389 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
CASD1Q96PB1 PANK2-209ENST00000621507 1763 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
Retrieved 100 of 98,524 protein–RNA pairs in 40.1 ms