Protein–RNA interactions for Protein: Q969K3

RNF34, E3 ubiquitin-protein ligase RNF34, humanhuman

Predictions only

Length 372 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF34Q969K3 NADSYN1-201ENST00000319023 2773 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
RNF34Q969K3 SCOC-211ENST00000614192 1959 ntAPPRIS P2 TSL 1 (best) BASIC17.55■□□□□ 0.4
RNF34Q969K3 HSF5-201ENST00000323777 4094 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
RNF34Q969K3 ASIC3-203ENST00000357922 2232 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
RNF34Q969K3 AC105020.1-201ENST00000435356 2205 ntBASIC17.55■□□□□ 0.4
RNF34Q969K3 RER1-202ENST00000378512 1404 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
RNF34Q969K3 TSPAN4-205ENST00000397406 1426 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
RNF34Q969K3 AC099508.1-201ENST00000499110 1666 ntTSL 4 BASIC17.55■□□□□ 0.4
RNF34Q969K3 SFTPB-202ENST00000409383 1867 ntAPPRIS P2 TSL 1 (best) BASIC17.54■□□□□ 0.4
RNF34Q969K3 WBP2-219ENST00000626827 1867 ntTSL 5 BASIC17.54■□□□□ 0.4
RNF34Q969K3 SEPHS2-201ENST00000478753 2551 ntAPPRIS P1 BASIC17.54■□□□□ 0.4
RNF34Q969K3 PACRGL-202ENST00000360916 2073 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
RNF34Q969K3 MELTF-201ENST00000296350 3963 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
RNF34Q969K3 C2orf27A-205ENST00000624391 1335 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
RNF34Q969K3 ITSN1-204ENST00000381285 6107 ntTSL 5 BASIC17.54■□□□□ 0.4
RNF34Q969K3 CPT2-210ENST00000637252 2739 ntTSL 5 BASIC17.54■□□□□ 0.4
RNF34Q969K3 MTERF2-201ENST00000240050 1790 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
RNF34Q969K3 RANBP3-201ENST00000034275 1762 ntAPPRIS ALT2 TSL 1 (best) BASIC17.54■□□□□ 0.4
RNF34Q969K3 RAB3IP-207ENST00000483530 1755 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
RNF34Q969K3 RXRB-201ENST00000374680 2908 ntAPPRIS P3 TSL 1 (best) BASIC17.54■□□□□ 0.4
RNF34Q969K3 MXD4-201ENST00000337190 4056 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
RNF34Q969K3 BCAM-206ENST00000589651 2686 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
RNF34Q969K3 SCAI-202ENST00000373549 1968 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
RNF34Q969K3 TMEM42-201ENST00000302392 1026 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
RNF34Q969K3 FABP5-202ENST00000396359 986 ntTSL 5 BASIC17.54■□□□□ 0.4
RNF34Q969K3 MSRB1-202ENST00000399753 847 ntTSL 3 BASIC17.54■□□□□ 0.4
RNF34Q969K3 ICAM2-202ENST00000418105 1252 ntAPPRIS P1 TSL 3 BASIC17.54■□□□□ 0.4
RNF34Q969K3 AC064807.1-202ENST00000423716 936 ntTSL 2 BASIC17.54■□□□□ 0.4
RNF34Q969K3 AC131097.3-202ENST00000439270 331 ntTSL 5 BASIC17.54■□□□□ 0.4
RNF34Q969K3 RNASET2-206ENST00000476238 887 ntAPPRIS P1 TSL 5 BASIC17.54■□□□□ 0.4
RNF34Q969K3 SPATA33-208ENST00000568929 1264 ntAPPRIS ALT2 TSL 2 BASIC17.54■□□□□ 0.4
RNF34Q969K3 AC091167.2-201ENST00000579581 588 ntBASIC17.54■□□□□ 0.4
RNF34Q969K3 ICAM2-208ENST00000579788 1103 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
RNF34Q969K3 MPDU1-223ENST00000582151 728 ntBASIC17.54■□□□□ 0.4
RNF34Q969K3 AC104532.1-201ENST00000588891 580 ntAPPRIS P1 TSL 4 BASIC17.54■□□□□ 0.4
RNF34Q969K3 AL671883.3-201ENST00000603274 991 ntBASIC17.54■□□□□ 0.4
RNF34Q969K3 AQP6-205ENST00000618286 829 ntTSL 5 BASIC17.54■□□□□ 0.4
RNF34Q969K3 ACE-202ENST00000290866 4959 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
RNF34Q969K3 AC131009.4-201ENST00000624048 1740 ntBASIC17.54■□□□□ 0.4
RNF34Q969K3 PRPF19-201ENST00000227524 2157 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
RNF34Q969K3 IGSF8-205ENST00000614243 2191 ntAPPRIS P2 TSL 1 (best) BASIC17.54■□□□□ 0.4
RNF34Q969K3 PC-214ENST00000628663 1470 ntTSL 5 BASIC17.54■□□□□ 0.4
RNF34Q969K3 HYAL3-201ENST00000336307 1942 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
RNF34Q969K3 LINC00336-201ENST00000477984 2107 ntTSL 2 BASIC17.54■□□□□ 0.4
RNF34Q969K3 CCDC112-205ENST00000506442 2145 ntAPPRIS ALT2 TSL 2 BASIC17.54■□□□□ 0.4
RNF34Q969K3 PPP4R3A-205ENST00000554684 4108 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
RNF34Q969K3 ATXN7-210ENST00000487717 3683 ntAPPRIS P3 TSL 5 BASIC17.54■□□□□ 0.4
RNF34Q969K3 BNIP2-212ENST00000607373 1851 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
RNF34Q969K3 SAP130-202ENST00000259235 4065 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
RNF34Q969K3 AC025580.3-201ENST00000617932 1424 ntBASIC17.54■□□□□ 0.4
RNF34Q969K3 GALNT14-202ENST00000349752 2733 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
RNF34Q969K3 LHX9-204ENST00000367391 1623 ntTSL 5 BASIC17.54■□□□□ 0.4
RNF34Q969K3 NF1-211ENST00000487476 2265 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
RNF34Q969K3 MAN1C1-203ENST00000374332 4641 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
RNF34Q969K3 MAN1C1-208ENST00000611903 4647 ntTSL 5 BASIC17.54■□□□□ 0.4
RNF34Q969K3 URAHP-203ENST00000517889 1381 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
RNF34Q969K3 NFIC-210ENST00000590282 1558 ntTSL 2 BASIC17.53■□□□□ 0.4
RNF34Q969K3 NR2E1-202ENST00000368986 3212 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
RNF34Q969K3 ETV3L-201ENST00000454449 1976 ntAPPRIS P1 TSL 2 BASIC17.53■□□□□ 0.4
RNF34Q969K3 CDH24-204ENST00000487137 3438 ntAPPRIS P1 TSL 5 BASIC17.53■□□□□ 0.4
RNF34Q969K3 STOML1-204ENST00000541638 6336 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
RNF34Q969K3 DYSF-207ENST00000409762 6727 ntAPPRIS ALT2 TSL 1 (best) BASIC17.53■□□□□ 0.4
RNF34Q969K3 DYSF-211ENST00000429174 6739 ntAPPRIS ALT2 TSL 1 (best) BASIC17.53■□□□□ 0.4
RNF34Q969K3 ARFGAP1-220ENST00000547204 1327 ntTSL 2 BASIC17.53■□□□□ 0.4
RNF34Q969K3 SNX19-207ENST00000528555 1506 ntTSL 2 BASIC17.53■□□□□ 0.4
RNF34Q969K3 AC012569.1-201ENST00000591191 1524 ntBASIC17.53■□□□□ 0.4
RNF34Q969K3 TMC5-202ENST00000381414 4755 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
RNF34Q969K3 ZBTB11-202ENST00000461821 2115 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
RNF34Q969K3 ANKRD26-201ENST00000376087 6591 ntAPPRIS P2 TSL 5 BASIC17.53■□□□□ 0.4
RNF34Q969K3 EIF3L-202ENST00000406934 2282 ntTSL 2 BASIC17.53■□□□□ 0.4
RNF34Q969K3 RREB1-204ENST00000379938 8778 ntAPPRIS P3 TSL 1 (best) BASIC17.53■□□□□ 0.4
RNF34Q969K3 SSR4-201ENST00000320857 1671 ntAPPRIS P1 TSL 2 BASIC17.53■□□□□ 0.4
RNF34Q969K3 TMED9-201ENST00000332598 1473 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
RNF34Q969K3 ARL5B-201ENST00000377275 7196 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
RNF34Q969K3 FCN2-201ENST00000291744 1057 ntAPPRIS P2 TSL 1 (best) BASIC17.53■□□□□ 0.4
RNF34Q969K3 HELT-201ENST00000338875 1008 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
RNF34Q969K3 DNAJC4-203ENST00000355040 759 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
RNF34Q969K3 MRPS16-201ENST00000372940 866 ntTSL 2 BASIC17.53■□□□□ 0.4
RNF34Q969K3 RHOQP3-201ENST00000437982 621 ntBASIC17.53■□□□□ 0.4
RNF34Q969K3 CYB561D1-208ENST00000528785 1271 ntAPPRIS ALT1 TSL 5 BASIC17.53■□□□□ 0.4
RNF34Q969K3 AC116021.1-201ENST00000530049 653 ntTSL 3 BASIC17.53■□□□□ 0.4
RNF34Q969K3 DYNLL1-204ENST00000548214 616 ntTSL 2 BASIC17.53■□□□□ 0.4
RNF34Q969K3 LRRC28-210ENST00000558879 581 ntTSL 4 BASIC17.53■□□□□ 0.4
RNF34Q969K3 AMFR-201ENST00000290649 3600 ntAPPRIS P2 TSL 1 (best) BASIC17.53■□□□□ 0.4
RNF34Q969K3 DISC1-209ENST00000439617 7059 ntAPPRIS ALT2 TSL 5 BASIC17.53■□□□□ 0.4
RNF34Q969K3 SLC35E2B-204ENST00000614300 2156 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
RNF34Q969K3 SYVN1-203ENST00000377190 3052 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
RNF34Q969K3 SGO1-201ENST00000263753 2338 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
RNF34Q969K3 WIPF1-201ENST00000272746 3028 ntAPPRIS ALT2 TSL 1 (best) BASIC17.53■□□□□ 0.4
RNF34Q969K3 TUBA4B-203ENST00000490341 1380 ntAPPRIS P1 TSL 2 BASIC17.53■□□□□ 0.4
RNF34Q969K3 TLE2-219ENST00000591529 2483 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
RNF34Q969K3 RGN-203ENST00000397180 2257 ntAPPRIS P1 TSL 5 BASIC17.52■□□□□ 0.4
RNF34Q969K3 AD000864.1-201ENST00000624076 2295 ntBASIC17.52■□□□□ 0.4
RNF34Q969K3 SLCO5A1-206ENST00000530307 2630 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
RNF34Q969K3 IRF1-202ENST00000405885 2061 ntAPPRIS P1 TSL 5 BASIC17.52■□□□□ 0.4
RNF34Q969K3 RSBN1-205ENST00000615321 2418 ntTSL 2 BASIC17.52■□□□□ 0.4
RNF34Q969K3 NAT9-201ENST00000357814 1875 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
RNF34Q969K3 GLG1-202ENST00000422840 4748 ntAPPRIS ALT2 TSL 1 (best) BASIC17.52■□□□□ 0.4
RNF34Q969K3 LRRC47-201ENST00000378251 4310 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
RNF34Q969K3 KLC1-202ENST00000334553 2524 ntTSL 5 BASIC17.52■□□□□ 0.4
Retrieved 100 of 98,524 protein–RNA pairs in 71.2 ms