Protein–RNA interactions for Protein: Q8NHY2

RFWD2, E3 ubiquitin-protein ligase RFWD2, humanhuman

Predictions only

Length 731 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFWD2Q8NHY2 CD55-204ENST00000367064 2760 ntAPPRIS P3 TSL 1 (best) BASIC16.65■□□□□ 0.26
RFWD2Q8NHY2 TVP23C-201ENST00000225576 1527 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
RFWD2Q8NHY2 PAX3-207ENST00000409551 1782 ntAPPRIS ALT1 TSL 1 (best) BASIC16.64■□□□□ 0.25
RFWD2Q8NHY2 CCT6A-202ENST00000335503 2529 ntTSL 5 BASIC16.64■□□□□ 0.25
RFWD2Q8NHY2 ICMT-201ENST00000343813 4771 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
RFWD2Q8NHY2 NRP1-203ENST00000374821 1988 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
RFWD2Q8NHY2 AC009292.1-201ENST00000502156 1986 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
RFWD2Q8NHY2 RPS19-206ENST00000598742 2359 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
RFWD2Q8NHY2 AKR1B15-202ENST00000457545 1621 ntAPPRIS P1 TSL 5 BASIC16.64■□□□□ 0.25
RFWD2Q8NHY2 MYEF2-201ENST00000267836 2958 ntAPPRIS ALT2 TSL 1 (best) BASIC16.64■□□□□ 0.25
RFWD2Q8NHY2 MRPL49-201ENST00000279242 2019 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
RFWD2Q8NHY2 TCF25-201ENST00000263346 2233 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
RFWD2Q8NHY2 SUPT20HL2-201ENST00000486479 2409 ntBASIC16.64■□□□□ 0.25
RFWD2Q8NHY2 AP000487.1-202ENST00000500185 2602 ntTSL 2 BASIC16.64■□□□□ 0.25
RFWD2Q8NHY2 SMARCA4-201ENST00000344626 5392 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
RFWD2Q8NHY2 PTPRS-205ENST00000588012 5993 ntAPPRIS P3 TSL 1 (best) BASIC16.64■□□□□ 0.25
RFWD2Q8NHY2 COPE-201ENST00000262812 1141 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
RFWD2Q8NHY2 RPA2-201ENST00000313433 1237 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
RFWD2Q8NHY2 EDARADD-201ENST00000334232 858 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
RFWD2Q8NHY2 COPE-203ENST00000351079 907 ntTSL 2 BASIC16.64■□□□□ 0.25
RFWD2Q8NHY2 MIR662-201ENST00000384847 95 ntBASIC16.64■□□□□ 0.25
RFWD2Q8NHY2 HLA-J-202ENST00000469281 1241 ntBASIC16.64■□□□□ 0.25
RFWD2Q8NHY2 AC005332.3-201ENST00000589904 676 ntBASIC16.64■□□□□ 0.25
RFWD2Q8NHY2 BDKRB1-204ENST00000611804 1085 ntAPPRIS P1 BASIC16.64■□□□□ 0.25
RFWD2Q8NHY2 EHD3-201ENST00000322054 4636 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
RFWD2Q8NHY2 GCAT-202ENST00000323205 1656 ntTSL 2 BASIC16.64■□□□□ 0.25
RFWD2Q8NHY2 KCTD14-201ENST00000353172 1691 ntAPPRIS P3 TSL 1 (best) BASIC16.64■□□□□ 0.25
RFWD2Q8NHY2 RPRD1A-201ENST00000357384 1850 ntAPPRIS P1 TSL 5 BASIC16.64■□□□□ 0.25
RFWD2Q8NHY2 BECN1-213ENST00000590099 2087 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
RFWD2Q8NHY2 POM121C-206ENST00000607367 3690 ntAPPRIS ALT2 TSL 5 BASIC16.64■□□□□ 0.25
RFWD2Q8NHY2 RASL11A-201ENST00000241463 1543 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
RFWD2Q8NHY2 SAP130-203ENST00000357702 4173 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
RFWD2Q8NHY2 DBN1-202ENST00000309007 2995 ntAPPRIS ALT2 TSL 1 (best) BASIC16.64■□□□□ 0.25
RFWD2Q8NHY2 IQCE-210ENST00000438376 2170 ntAPPRIS ALT2 TSL 5 BASIC16.64■□□□□ 0.25
RFWD2Q8NHY2 Z99756.1-201ENST00000458463 1951 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
RFWD2Q8NHY2 BX276092.9-201ENST00000636797 1563 ntAPPRIS ALT2 TSL 5 BASIC16.64■□□□□ 0.25
RFWD2Q8NHY2 ATP6V1B2-201ENST00000276390 2875 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
RFWD2Q8NHY2 CDK18-201ENST00000360066 3141 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
RFWD2Q8NHY2 NRN1-201ENST00000244766 1624 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
RFWD2Q8NHY2 GHRHR-201ENST00000326139 1602 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
RFWD2Q8NHY2 LHX9-204ENST00000367391 1623 ntTSL 5 BASIC16.63■□□□□ 0.25
RFWD2Q8NHY2 EVPL-201ENST00000301607 6614 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
RFWD2Q8NHY2 EGLN3-201ENST00000250457 2709 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
RFWD2Q8NHY2 PRSS50-201ENST00000460241 2960 ntAPPRIS P1 TSL 2 BASIC16.63■□□□□ 0.25
RFWD2Q8NHY2 TIGAR-201ENST00000179259 2782 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
RFWD2Q8NHY2 IGHM-202ENST00000637539 1683 ntAPPRIS P5 BASIC16.63■□□□□ 0.25
RFWD2Q8NHY2 CTCF-201ENST00000264010 3939 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
RFWD2Q8NHY2 NPRL2-201ENST00000232501 1700 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
RFWD2Q8NHY2 ZNF580-202ENST00000543039 1707 ntAPPRIS P1 BASIC16.63■□□□□ 0.25
RFWD2Q8NHY2 GLRX2-201ENST00000367439 701 ntAPPRIS ALT2 TSL 1 (best) BASIC16.63■□□□□ 0.25
RFWD2Q8NHY2 COMTD1-201ENST00000372538 976 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
RFWD2Q8NHY2 STARP1-201ENST00000397973 869 ntBASIC16.63■□□□□ 0.25
RFWD2Q8NHY2 FAM8A6P-201ENST00000407496 1135 ntBASIC16.63■□□□□ 0.25
RFWD2Q8NHY2 AC007731.5-201ENST00000429594 644 ntAPPRIS P1 TSL 5 BASIC16.63■□□□□ 0.25
RFWD2Q8NHY2 KRT18P38-201ENST00000449496 1282 ntBASIC16.63■□□□□ 0.25
RFWD2Q8NHY2 FNDC5-205ENST00000496770 837 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
RFWD2Q8NHY2 AC004080.5-201ENST00000498652 368 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
RFWD2Q8NHY2 STK19B-204ENST00000512515 211 ntBASIC16.63■□□□□ 0.25
RFWD2Q8NHY2 CLDN7-204ENST00000571881 735 ntTSL 3 BASIC16.63■□□□□ 0.25
RFWD2Q8NHY2 AL390719.2-201ENST00000606993 987 ntBASIC16.63■□□□□ 0.25
RFWD2Q8NHY2 C10orf142-201ENST00000619243 1110 ntAPPRIS P2 TSL 2 BASIC16.63■□□□□ 0.25
RFWD2Q8NHY2 ISOC2-201ENST00000085068 1122 ntTSL 2 BASIC16.63■□□□□ 0.25
RFWD2Q8NHY2 ETV3L-201ENST00000454449 1976 ntAPPRIS P1 TSL 2 BASIC16.63■□□□□ 0.25
RFWD2Q8NHY2 TPD52L2-203ENST00000348257 2237 ntAPPRIS ALT1 TSL 1 (best) BASIC16.63■□□□□ 0.25
RFWD2Q8NHY2 CLEC18A-209ENST00000615430 2215 ntAPPRIS P2 TSL 5 BASIC16.63■□□□□ 0.25
RFWD2Q8NHY2 CLEC18C-211ENST00000618957 2215 ntAPPRIS P2 TSL 5 BASIC16.63■□□□□ 0.25
RFWD2Q8NHY2 CLEC18B-205ENST00000619275 2215 ntAPPRIS ALT2 TSL 5 BASIC16.63■□□□□ 0.25
RFWD2Q8NHY2 MBD4-203ENST00000429544 2478 ntAPPRIS ALT2 TSL 1 (best) BASIC16.63■□□□□ 0.25
RFWD2Q8NHY2 UBA5-213ENST00000494238 2997 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
RFWD2Q8NHY2 KIF5B-201ENST00000302418 5877 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
RFWD2Q8NHY2 LY6E-203ENST00000517503 1335 ntAPPRIS ALT2 TSL 3 BASIC16.63■□□□□ 0.25
RFWD2Q8NHY2 SYNCRIP-202ENST00000369622 3023 ntAPPRIS P3 TSL 1 (best) BASIC16.63■□□□□ 0.25
RFWD2Q8NHY2 CD9-203ENST00000382518 1556 ntAPPRIS P1 TSL 5 BASIC16.63■□□□□ 0.25
RFWD2Q8NHY2 ADAM6-201ENST00000606026 1843 ntTSL 2 BASIC16.63■□□□□ 0.25
RFWD2Q8NHY2 LINGO1-201ENST00000355300 3055 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
RFWD2Q8NHY2 CTDSP1-201ENST00000273062 2638 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
RFWD2Q8NHY2 EMD-202ENST00000369842 1379 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
RFWD2Q8NHY2 AC073347.1-201ENST00000421633 2643 ntBASIC16.63■□□□□ 0.25
RFWD2Q8NHY2 NSDHL-203ENST00000440023 1630 ntAPPRIS P2 TSL 5 BASIC16.63■□□□□ 0.25
RFWD2Q8NHY2 EIF2S2-201ENST00000374980 2656 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
RFWD2Q8NHY2 PEPD-201ENST00000244137 1910 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
RFWD2Q8NHY2 COTL1-203ENST00000564057 1677 ntTSL 5 BASIC16.62■□□□□ 0.25
RFWD2Q8NHY2 CCDC28B-202ENST00000421922 1415 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
RFWD2Q8NHY2 AC125634.1-201ENST00000438758 1403 ntBASIC16.62■□□□□ 0.25
RFWD2Q8NHY2 PITPNM2-208ENST00000542749 6660 ntAPPRIS P3 TSL 1 (best) BASIC16.62■□□□□ 0.25
RFWD2Q8NHY2 MAGI1-202ENST00000402939 4389 ntAPPRIS ALT2 TSL 1 (best) BASIC16.62■□□□□ 0.25
RFWD2Q8NHY2 WDR18-204ENST00000587001 1465 ntTSL 5 BASIC16.62■□□□□ 0.25
RFWD2Q8NHY2 AL353593.2-201ENST00000602529 1483 ntBASIC16.62■□□□□ 0.25
RFWD2Q8NHY2 GRAMD2B-217ENST00000515200 3109 ntTSL 5 BASIC16.62■□□□□ 0.25
RFWD2Q8NHY2 CTD-3080P12.3-203ENST00000514376 1757 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
RFWD2Q8NHY2 PDGFA-203ENST00000402802 2305 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
RFWD2Q8NHY2 CNPPD1-202ENST00000409789 2073 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
RFWD2Q8NHY2 P2RY6-204ENST00000393592 1515 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
RFWD2Q8NHY2 PRKD2-216ENST00000601806 2906 ntAPPRIS ALT2 TSL 5 BASIC16.62■□□□□ 0.25
RFWD2Q8NHY2 TRPC4AP-201ENST00000252015 3226 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
RFWD2Q8NHY2 VARS2-212ENST00000542001 4064 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
RFWD2Q8NHY2 AC092198.1-201ENST00000447651 2691 ntTSL 2 BASIC16.62■□□□□ 0.25
RFWD2Q8NHY2 CD320-201ENST00000301458 1250 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
RFWD2Q8NHY2 TBPL1-203ENST00000367871 808 ntTSL 2 BASIC16.62■□□□□ 0.25
RFWD2Q8NHY2 SMYD3-204ENST00000403792 1209 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
Retrieved 100 of 98,524 protein–RNA pairs in 71.1 ms