Protein–RNA interactions for Protein: Q8NFH5

NUP35, Nucleoporin NUP53, humanhuman

Predictions only

Length 326 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NUP35Q8NFH5 AADAT-201ENST00000337664 2261 ntAPPRIS P3 TSL 1 (best) BASIC12.58□□□□□ -0.4
NUP35Q8NFH5 GRB2-202ENST00000316804 3248 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
NUP35Q8NFH5 GJB6-202ENST00000356192 2131 ntAPPRIS P1 TSL 2 BASIC12.58□□□□□ -0.4
NUP35Q8NFH5 DZIP1-204ENST00000376829 3738 ntAPPRIS P4 TSL 1 (best) BASIC12.58□□□□□ -0.4
NUP35Q8NFH5 MMRN2-201ENST00000372027 4375 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
NUP35Q8NFH5 SSFA2-205ENST00000431877 5150 ntAPPRIS ALT2 TSL 1 (best) BASIC12.58□□□□□ -0.4
NUP35Q8NFH5 PCYOX1-201ENST00000264441 2959 ntTSL 5 BASIC12.57□□□□□ -0.4
NUP35Q8NFH5 RHOC-201ENST00000285735 2199 ntAPPRIS P1 TSL 2 BASIC12.57□□□□□ -0.4
NUP35Q8NFH5 LEF1-202ENST00000379951 3477 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
NUP35Q8NFH5 RUFY2-204ENST00000399200 2685 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
NUP35Q8NFH5 PPP6R1-201ENST00000412770 3961 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
NUP35Q8NFH5 ANKHD1-EIF4EBP3-203ENST00000532219 8246 ntAPPRIS P1 TSL 2 BASIC12.57□□□□□ -0.4
NUP35Q8NFH5 ATP2C1-224ENST00000533801 3690 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
NUP35Q8NFH5 TNR-201ENST00000263525 5190 ntAPPRIS P1 TSL 5 BASIC12.57□□□□□ -0.4
NUP35Q8NFH5 KCNH3-201ENST00000257981 3867 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
NUP35Q8NFH5 ZNF252P-AS1-201ENST00000527067 3236 ntBASIC12.57□□□□□ -0.4
NUP35Q8NFH5 ELFN1-202ENST00000561626 3742 ntAPPRIS P1 TSL 2 BASIC12.57□□□□□ -0.4
NUP35Q8NFH5 LIMK2-203ENST00000340552 2789 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
NUP35Q8NFH5 LINC01267-201ENST00000502417 2284 ntTSL 2 BASIC12.57□□□□□ -0.4
NUP35Q8NFH5 HMOX2-204ENST00000414777 1752 ntAPPRIS P1 TSL 5 BASIC12.57□□□□□ -0.4
NUP35Q8NFH5 LONP1-213ENST00000590729 2626 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
NUP35Q8NFH5 CFL1-201ENST00000308162 1234 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
NUP35Q8NFH5 FUOM-203ENST00000368552 762 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
NUP35Q8NFH5 F8A2-201ENST00000369505 1116 ntAPPRIS P1 BASIC12.57□□□□□ -0.4
NUP35Q8NFH5 DAB1-202ENST00000371230 1150 ntTSL 5 BASIC12.57□□□□□ -0.4
NUP35Q8NFH5 ID1-202ENST00000376112 994 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
NUP35Q8NFH5 TRA2B-203ENST00000382191 976 ntTSL 2 BASIC12.57□□□□□ -0.4
NUP35Q8NFH5 MPV17L-202ENST00000396385 1037 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
NUP35Q8NFH5 PAX3-208ENST00000409828 1254 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
NUP35Q8NFH5 SAPCD2P2-201ENST00000431719 1174 ntBASIC12.57□□□□□ -0.4
NUP35Q8NFH5 EHMT1-211ENST00000482340 691 ntTSL 5 BASIC12.57□□□□□ -0.4
NUP35Q8NFH5 FADS3-204ENST00000525588 1254 ntTSL 5 BASIC12.57□□□□□ -0.4
NUP35Q8NFH5 ADM-205ENST00000528544 586 ntTSL 2 BASIC12.57□□□□□ -0.4
NUP35Q8NFH5 RAB11B-AS1-201ENST00000593581 1013 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
NUP35Q8NFH5 AC010531.6-201ENST00000602282 401 ntTSL 2 BASIC12.57□□□□□ -0.4
NUP35Q8NFH5 PPHLN1-204ENST00000358314 1643 ntTSL 2 BASIC12.57□□□□□ -0.4
NUP35Q8NFH5 GOLGA8DP-202ENST00000341390 2184 ntBASIC12.57□□□□□ -0.4
NUP35Q8NFH5 STXBP5-207ENST00000546097 2160 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
NUP35Q8NFH5 HPN-201ENST00000262626 2363 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
NUP35Q8NFH5 LDB3-208ENST00000623007 1664 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
NUP35Q8NFH5 TBCD-202ENST00000539345 3975 ntTSL 5 BASIC12.57□□□□□ -0.4
NUP35Q8NFH5 C2orf27B-201ENST00000623129 1325 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
NUP35Q8NFH5 OSBPL6-203ENST00000357080 2217 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
NUP35Q8NFH5 E2F3-201ENST00000346618 4749 ntAPPRIS P3 TSL 1 (best) BASIC12.57□□□□□ -0.4
NUP35Q8NFH5 HLA-A-204ENST00000396634 1868 ntAPPRIS P1 BASIC12.57□□□□□ -0.4
NUP35Q8NFH5 ELL-203ENST00000596124 1852 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
NUP35Q8NFH5 NFIX-214ENST00000592199 1509 ntTSL 5 BASIC12.57□□□□□ -0.4
NUP35Q8NFH5 APBA2-205ENST00000558330 3349 ntTSL 2 BASIC12.57□□□□□ -0.4
NUP35Q8NFH5 NACAD-202ENST00000490531 4780 ntAPPRIS P1 TSL 5 BASIC12.57□□□□□ -0.4
NUP35Q8NFH5 CLPTM1L-209ENST00000507807 1740 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
NUP35Q8NFH5 MYADML2-201ENST00000409745 2452 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
NUP35Q8NFH5 PHRF1-203ENST00000416188 5227 ntAPPRIS P3 TSL 1 (best) BASIC12.56□□□□□ -0.4
NUP35Q8NFH5 PIK3CD-206ENST00000536656 5483 ntTSL 5 BASIC12.56□□□□□ -0.4
NUP35Q8NFH5 PIK3CD-208ENST00000628140 5483 ntTSL 5 BASIC12.56□□□□□ -0.4
NUP35Q8NFH5 TEN1-CDK3-202ENST00000569284 3287 ntAPPRIS P1 TSL 2 BASIC12.56□□□□□ -0.4
NUP35Q8NFH5 SLC25A33-201ENST00000302692 3854 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
NUP35Q8NFH5 PTGFRN-201ENST00000393203 6178 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
NUP35Q8NFH5 CCDC28B-202ENST00000421922 1415 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
NUP35Q8NFH5 ARHGAP9-203ENST00000424809 2569 ntTSL 2 BASIC12.56□□□□□ -0.4
NUP35Q8NFH5 ACHE-202ENST00000302913 2956 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
NUP35Q8NFH5 AC100803.3-201ENST00000606664 2961 ntTSL 5 BASIC12.56□□□□□ -0.4
NUP35Q8NFH5 IQCE-203ENST00000402050 6844 ntAPPRIS P3 TSL 1 (best) BASIC12.56□□□□□ -0.4
NUP35Q8NFH5 SLC35F2-204ENST00000525815 3170 ntAPPRIS P2 TSL 1 (best) BASIC12.56□□□□□ -0.4
NUP35Q8NFH5 FAM219A-206ENST00000379087 3573 ntAPPRIS ALT1 TSL 4 BASIC12.56□□□□□ -0.4
NUP35Q8NFH5 DCTN1-203ENST00000409240 4365 ntAPPRIS ALT2 TSL 1 (best) BASIC12.56□□□□□ -0.4
NUP35Q8NFH5 TOMM40-207ENST00000592434 3415 ntAPPRIS ALT2 TSL 2 BASIC12.56□□□□□ -0.4
NUP35Q8NFH5 HBA1-201ENST00000320868 577 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
NUP35Q8NFH5 CCDC107-201ENST00000327351 804 ntAPPRIS ALT2 TSL 1 (best) BASIC12.56□□□□□ -0.4
NUP35Q8NFH5 RHOC-203ENST00000369632 1026 ntAPPRIS P1 TSL 3 BASIC12.56□□□□□ -0.4
NUP35Q8NFH5 CDC26-201ENST00000374206 872 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
NUP35Q8NFH5 RPS9-203ENST00000391752 772 ntAPPRIS P1 TSL 2 BASIC12.56□□□□□ -0.4
NUP35Q8NFH5 WNT7B-203ENST00000410058 714 ntTSL 3 BASIC12.56□□□□□ -0.4
NUP35Q8NFH5 SMIM19-201ENST00000414154 793 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
NUP35Q8NFH5 ZNF534-203ENST00000432303 956 ntTSL 2 BASIC12.56□□□□□ -0.4
NUP35Q8NFH5 SMG1P1-207ENST00000446662 852 ntTSL 5 BASIC12.56□□□□□ -0.4
NUP35Q8NFH5 AC068472.1-201ENST00000474589 881 ntBASIC12.56□□□□□ -0.4
NUP35Q8NFH5 PSMD9-208ENST00000542602 516 ntTSL 3 BASIC12.56□□□□□ -0.4
NUP35Q8NFH5 AC092118.1-202ENST00000568697 718 ntTSL 3 BASIC12.56□□□□□ -0.4
NUP35Q8NFH5 NEK4P2-201ENST00000580004 1012 ntBASIC12.56□□□□□ -0.4
NUP35Q8NFH5 FFAR4-203ENST00000604414 1142 ntTSL 3 BASIC12.56□□□□□ -0.4
NUP35Q8NFH5 ZNF534-205ENST00000617900 1085 ntTSL 2 BASIC12.56□□□□□ -0.4
NUP35Q8NFH5 SLC35A2-213ENST00000635015 1008 ntTSL 2 BASIC12.56□□□□□ -0.4
NUP35Q8NFH5 PRMT1-217ENST00000532489 1686 ntTSL 5 BASIC12.56□□□□□ -0.4
NUP35Q8NFH5 NOTCH2NL-201ENST00000362074 1874 ntAPPRIS P2 TSL 1 (best) BASIC12.56□□□□□ -0.4
NUP35Q8NFH5 LSP1-217ENST00000612798 1881 ntAPPRIS ALT2 TSL 2 BASIC12.56□□□□□ -0.4
NUP35Q8NFH5 ACOT12-201ENST00000307624 2086 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
NUP35Q8NFH5 SPHK2-210ENST00000599748 2683 ntAPPRIS ALT2 TSL 1 (best) BASIC12.56□□□□□ -0.4
NUP35Q8NFH5 CPT2-201ENST00000371486 3094 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
NUP35Q8NFH5 GSPT1-202ENST00000434724 7105 ntAPPRIS P4 TSL 1 (best) BASIC12.56□□□□□ -0.4
NUP35Q8NFH5 ATP6AP2-217ENST00000636580 2337 ntAPPRIS P2 TSL 1 (best) BASIC12.56□□□□□ -0.4
NUP35Q8NFH5 LCK-206ENST00000373564 2137 ntTSL 5 BASIC12.56□□□□□ -0.4
NUP35Q8NFH5 TMEM101-201ENST00000206380 1536 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
NUP35Q8NFH5 SIRT6-201ENST00000305232 1506 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
NUP35Q8NFH5 FAM9A-202ENST00000543214 1544 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
NUP35Q8NFH5 TRAPPC3-209ENST00000616395 1336 ntTSL 3 BASIC12.56□□□□□ -0.4
NUP35Q8NFH5 TRAPPC3-210ENST00000617904 1305 ntTSL 2 BASIC12.56□□□□□ -0.4
NUP35Q8NFH5 GOLGA7B-201ENST00000370602 6447 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
NUP35Q8NFH5 PTPN21-201ENST00000328736 6089 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
NUP35Q8NFH5 HARS-204ENST00000438307 1789 ntTSL 2 BASIC12.56□□□□□ -0.4
NUP35Q8NFH5 AP1S3-206ENST00000443700 1785 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
Retrieved 100 of 98,524 protein–RNA pairs in 35 ms