Protein–RNA interactions for Protein: Q8N6N3

C1orf52, UPF0690 protein C1orf52, humanhuman

Known RBP Predictions only

Length 182 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
C1orf52Q8N6N3 RPN1-201ENST00000296255 2314 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
C1orf52Q8N6N3 LIMS2-208ENST00000410011 2335 ntAPPRIS ALT1 TSL 1 (best) BASIC16.06■□□□□ 0.16
C1orf52Q8N6N3 ASAP3-212ENST00000618240 2226 ntTSL 5 BASIC16.06■□□□□ 0.16
C1orf52Q8N6N3 TCP10L2-202ENST00000366832 2185 ntAPPRIS P2 TSL 1 (best) BASIC16.06■□□□□ 0.16
C1orf52Q8N6N3 PLXNB3-201ENST00000361971 6146 ntAPPRIS P3 TSL 1 (best) BASIC16.06■□□□□ 0.16
C1orf52Q8N6N3 PELI2-201ENST00000267460 5909 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
C1orf52Q8N6N3 SNX33P1-201ENST00000592116 1762 ntBASIC16.06■□□□□ 0.16
C1orf52Q8N6N3 FBXO4-201ENST00000281623 1682 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
C1orf52Q8N6N3 SH2D2A-202ENST00000368199 1658 ntAPPRIS P3 TSL 1 (best) BASIC16.06■□□□□ 0.16
C1orf52Q8N6N3 COPS8-202ENST00000392008 1654 ntTSL 2 BASIC16.06■□□□□ 0.16
C1orf52Q8N6N3 AP002414.3-201ENST00000589352 1468 ntBASIC16.06■□□□□ 0.16
C1orf52Q8N6N3 CCDC94-201ENST00000262962 1434 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
C1orf52Q8N6N3 ANKRD24-202ENST00000318934 3906 ntAPPRIS P2 TSL 5 BASIC16.06■□□□□ 0.16
C1orf52Q8N6N3 NDUFS7-201ENST00000233627 1039 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
C1orf52Q8N6N3 TBC1D7-201ENST00000343141 1027 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
C1orf52Q8N6N3 KRT18P67-201ENST00000432816 1264 ntBASIC16.06■□□□□ 0.16
C1orf52Q8N6N3 AC079781.3-201ENST00000449110 356 ntBASIC16.06■□□□□ 0.16
C1orf52Q8N6N3 AF186996.4-201ENST00000467186 377 ntBASIC16.06■□□□□ 0.16
C1orf52Q8N6N3 TCTN1-208ENST00000471804 718 ntTSL 3 BASIC16.06■□□□□ 0.16
C1orf52Q8N6N3 TSPAN4-214ENST00000525201 834 ntTSL 5 BASIC16.06■□□□□ 0.16
C1orf52Q8N6N3 AC107918.2-201ENST00000530817 355 ntBASIC16.06■□□□□ 0.16
C1orf52Q8N6N3 AC105339.3-201ENST00000560043 636 ntBASIC16.06■□□□□ 0.16
C1orf52Q8N6N3 AC012640.2-201ENST00000561606 901 ntBASIC16.06■□□□□ 0.16
C1orf52Q8N6N3 MIR4492-201ENST00000581627 80 ntBASIC16.06■□□□□ 0.16
C1orf52Q8N6N3 AC068594.1-202ENST00000581657 749 ntTSL 3 BASIC16.06■□□□□ 0.16
C1orf52Q8N6N3 AL356488.2-201ENST00000602755 427 ntBASIC16.06■□□□□ 0.16
C1orf52Q8N6N3 IRF5-214ENST00000613821 595 ntTSL 5 BASIC16.06■□□□□ 0.16
C1orf52Q8N6N3 AL691432.3-201ENST00000621860 400 ntBASIC16.06■□□□□ 0.16
C1orf52Q8N6N3 LINC01666-201ENST00000623794 845 ntTSL 5 BASIC16.06■□□□□ 0.16
C1orf52Q8N6N3 SLC9A5-201ENST00000299798 3736 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
C1orf52Q8N6N3 MAP3K3-202ENST00000361733 3529 ntAPPRIS P3 TSL 1 (best) BASIC16.06■□□□□ 0.16
C1orf52Q8N6N3 DNAAF2-202ENST00000406043 2819 ntAPPRIS ALT2 TSL 1 (best) BASIC16.06■□□□□ 0.16
C1orf52Q8N6N3 ADAM11-203ENST00000535346 2529 ntTSL 2 BASIC16.06■□□□□ 0.16
C1orf52Q8N6N3 NF1-211ENST00000487476 2265 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
C1orf52Q8N6N3 ANTXRL-205ENST00000620264 2206 ntAPPRIS P2 TSL 5 BASIC16.06■□□□□ 0.16
C1orf52Q8N6N3 FOXE1-201ENST00000375123 3462 ntAPPRIS P1 BASIC16.06■□□□□ 0.16
C1orf52Q8N6N3 TMEM25-202ENST00000354064 1965 ntTSL 2 BASIC16.06■□□□□ 0.16
C1orf52Q8N6N3 EFNB3-201ENST00000226091 3222 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
C1orf52Q8N6N3 SLC25A35-202ENST00000577745 1860 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
C1orf52Q8N6N3 CD1E-213ENST00000444681 1820 ntAPPRIS ALT2 TSL 1 (best) BASIC16.05■□□□□ 0.16
C1orf52Q8N6N3 FBXO4-202ENST00000296812 1731 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
C1orf52Q8N6N3 LGALS12-201ENST00000255684 1667 ntAPPRIS ALT2 TSL 1 (best) BASIC16.05■□□□□ 0.16
C1orf52Q8N6N3 KCNG3-201ENST00000306078 3824 ntAPPRIS P3 TSL 1 (best) BASIC16.05■□□□□ 0.16
C1orf52Q8N6N3 EPN2-201ENST00000314728 4871 ntAPPRIS P4 TSL 1 (best) BASIC16.05■□□□□ 0.16
C1orf52Q8N6N3 NKIRAS1-202ENST00000412028 1605 ntAPPRIS ALT1 TSL 5 BASIC16.05■□□□□ 0.16
C1orf52Q8N6N3 ZNF408-201ENST00000311764 2442 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
C1orf52Q8N6N3 CCDC120-203ENST00000536628 2381 ntAPPRIS ALT2 TSL 2 BASIC16.05■□□□□ 0.16
C1orf52Q8N6N3 LILRA6-201ENST00000245621 1395 ntAPPRIS ALT2 TSL 5 BASIC16.05■□□□□ 0.16
C1orf52Q8N6N3 SEPT8-204ENST00000378699 2289 ntTSL 5 BASIC16.05■□□□□ 0.16
C1orf52Q8N6N3 CDKN1A-201ENST00000244741 2180 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
C1orf52Q8N6N3 SYTL2-215ENST00000527523 3049 ntTSL 2 BASIC16.05■□□□□ 0.16
C1orf52Q8N6N3 AL139384.1-201ENST00000612143 3047 ntBASIC16.05■□□□□ 0.16
C1orf52Q8N6N3 SBSPON-201ENST00000297354 3801 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
C1orf52Q8N6N3 VAMP5-201ENST00000306384 689 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
C1orf52Q8N6N3 SWI5-201ENST00000320188 980 ntAPPRIS P3 TSL 1 (best) BASIC16.05■□□□□ 0.16
C1orf52Q8N6N3 TMEM150B-201ENST00000326652 943 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
C1orf52Q8N6N3 INIP-202ENST00000374236 874 ntTSL 2 BASIC16.05■□□□□ 0.16
C1orf52Q8N6N3 FAM99B-201ENST00000382166 1067 ntTSL 5 BASIC16.05■□□□□ 0.16
C1orf52Q8N6N3 KRTAP5-11-201ENST00000398530 1021 ntAPPRIS P2 BASIC16.05■□□□□ 0.16
C1orf52Q8N6N3 NPY-203ENST00000407573 705 ntAPPRIS P1 TSL 3 BASIC16.05■□□□□ 0.16
C1orf52Q8N6N3 MEF2B-202ENST00000409447 1297 ntTSL 3 BASIC16.05■□□□□ 0.16
C1orf52Q8N6N3 LINC00421-201ENST00000413833 1054 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
C1orf52Q8N6N3 IGF2-206ENST00000418738 934 ntAPPRIS P2 TSL 1 (best) BASIC16.05■□□□□ 0.16
C1orf52Q8N6N3 MMP24-AS1-201ENST00000424358 867 ntAPPRIS P1 TSL 2 BASIC16.05■□□□□ 0.16
C1orf52Q8N6N3 AQP12A-202ENST00000429564 1110 ntAPPRIS P5 TSL 5 BASIC16.05■□□□□ 0.16
C1orf52Q8N6N3 FIGNL1-207ENST00000435566 593 ntTSL 4 BASIC16.05■□□□□ 0.16
C1orf52Q8N6N3 NDUFB2-208ENST00000471136 499 ntTSL 3 BASIC16.05■□□□□ 0.16
C1orf52Q8N6N3 SMN1-203ENST00000503079 1219 ntTSL 5 BASIC16.05■□□□□ 0.16
C1orf52Q8N6N3 FAU-209ENST00000531743 697 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
C1orf52Q8N6N3 AC091167.2-201ENST00000579581 588 ntBASIC16.05■□□□□ 0.16
C1orf52Q8N6N3 RN7SL510P-201ENST00000581311 263 ntBASIC16.05■□□□□ 0.16
C1orf52Q8N6N3 AC012615.5-201ENST00000592720 581 ntTSL 4 BASIC16.05■□□□□ 0.16
C1orf52Q8N6N3 AC008667.4-201ENST00000607370 168 ntBASIC16.05■□□□□ 0.16
C1orf52Q8N6N3 AC148477.8-201ENST00000624298 468 ntBASIC16.05■□□□□ 0.16
C1orf52Q8N6N3 RAVER2-202ENST00000371072 4362 ntAPPRIS P2 TSL 1 (best) BASIC16.05■□□□□ 0.16
C1orf52Q8N6N3 SCAI-202ENST00000373549 1968 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
C1orf52Q8N6N3 LGALS3BP-218ENST00000591778 1961 ntTSL 2 BASIC16.05■□□□□ 0.16
C1orf52Q8N6N3 MAGEA2-207ENST00000620710 1947 ntAPPRIS P1 TSL 2 BASIC16.05■□□□□ 0.16
C1orf52Q8N6N3 BMP3-201ENST00000282701 5734 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
C1orf52Q8N6N3 CACNA1H-206ENST00000565831 7815 ntAPPRIS ALT2 TSL 1 (best) BASIC16.05■□□□□ 0.16
C1orf52Q8N6N3 AC046158.3-201ENST00000624947 2558 ntBASIC16.05■□□□□ 0.16
C1orf52Q8N6N3 SSH1-201ENST00000326470 2432 ntAPPRIS ALT2 TSL 2 BASIC16.05■□□□□ 0.16
C1orf52Q8N6N3 GPR158-AS1-201ENST00000449643 2433 ntTSL 2 BASIC16.05■□□□□ 0.16
C1orf52Q8N6N3 ADAM8-205ENST00000485491 2441 ntTSL 2 BASIC16.05■□□□□ 0.16
C1orf52Q8N6N3 CHAD-201ENST00000258969 1739 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
C1orf52Q8N6N3 AC131009.4-201ENST00000624048 1740 ntBASIC16.05■□□□□ 0.16
C1orf52Q8N6N3 CLU-215ENST00000523500 2381 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
C1orf52Q8N6N3 IGHM-202ENST00000637539 1683 ntAPPRIS P5 BASIC16.05■□□□□ 0.16
C1orf52Q8N6N3 AL671710.1-201ENST00000610245 2349 ntBASIC16.05■□□□□ 0.16
C1orf52Q8N6N3 HLA-F-216ENST00000259951 1635 ntAPPRIS P4 BASIC16.05■□□□□ 0.16
C1orf52Q8N6N3 SUV39H1-202ENST00000376687 2871 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
C1orf52Q8N6N3 CYP2R1-201ENST00000334636 2235 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
C1orf52Q8N6N3 STK24-203ENST00000397517 4578 ntTSL 2 BASIC16.04■□□□□ 0.16
C1orf52Q8N6N3 LHCGR-204ENST00000405626 2073 ntAPPRIS ALT2 TSL 5 BASIC16.04■□□□□ 0.16
C1orf52Q8N6N3 RBFA-202ENST00000306735 1407 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
C1orf52Q8N6N3 SH3RF1-201ENST00000284637 5272 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
C1orf52Q8N6N3 FAM210B-201ENST00000371384 3046 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
C1orf52Q8N6N3 AC005052.1-201ENST00000625181 2492 ntBASIC16.04■□□□□ 0.16
C1orf52Q8N6N3 PNKD-202ENST00000258362 2991 ntAPPRIS ALT2 TSL 1 (best) BASIC16.04■□□□□ 0.16
C1orf52Q8N6N3 REPIN1-203ENST00000444957 2969 ntAPPRIS P3 TSL 1 (best) BASIC16.04■□□□□ 0.16
Retrieved 100 of 98,524 protein–RNA pairs in 47.8 ms