Protein–RNA interactions for Protein: Q8N5R6

CCDC33, Coiled-coil domain-containing protein 33, humanhuman

Predictions only

Length 958 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC33Q8N5R6 AFMID-201ENST00000327898 1700 ntAPPRIS ALT2 TSL 1 (best) BASIC17.62■□□□□ 0.41
CCDC33Q8N5R6 RGS3-210ENST00000462143 2759 ntTSL 2 BASIC17.62■□□□□ 0.41
CCDC33Q8N5R6 THAP3-202ENST00000307896 1046 ntAPPRIS ALT2 TSL 2 BASIC17.62■□□□□ 0.41
CCDC33Q8N5R6 ICOSLG-201ENST00000344330 1009 ntAPPRIS ALT2 TSL 1 (best) BASIC17.62■□□□□ 0.41
CCDC33Q8N5R6 TMEM205-201ENST00000354882 1034 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
CCDC33Q8N5R6 BLOC1S1-201ENST00000547076 837 ntTSL 2 BASIC17.62■□□□□ 0.41
CCDC33Q8N5R6 CIPC-205ENST00000555437 566 ntTSL 3 BASIC17.62■□□□□ 0.41
CCDC33Q8N5R6 TMEM205-205ENST00000586590 677 ntAPPRIS P1 TSL 5 BASIC17.62■□□□□ 0.41
CCDC33Q8N5R6 TMEM205-207ENST00000586956 1003 ntAPPRIS P1 TSL 2 BASIC17.62■□□□□ 0.41
CCDC33Q8N5R6 ZEB1-AS1-206ENST00000606250 573 ntTSL 5 BASIC17.62■□□□□ 0.41
CCDC33Q8N5R6 AL590999.1-203ENST00000606829 542 ntTSL 4 BASIC17.62■□□□□ 0.41
CCDC33Q8N5R6 AL356481.3-201ENST00000630523 575 ntTSL 5 BASIC17.62■□□□□ 0.41
CCDC33Q8N5R6 PCDHB17P-201ENST00000539533 2393 ntBASIC17.62■□□□□ 0.41
CCDC33Q8N5R6 AES-201ENST00000221561 1884 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
CCDC33Q8N5R6 AL021453.1-201ENST00000333487 2989 ntTSL 2 BASIC17.62■□□□□ 0.41
CCDC33Q8N5R6 TJP2-202ENST00000377245 4611 ntAPPRIS P4 TSL 1 (best) BASIC17.62■□□□□ 0.41
CCDC33Q8N5R6 TNFRSF13B-201ENST00000261652 1357 ntAPPRIS P2 TSL 1 (best) BASIC17.62■□□□□ 0.41
CCDC33Q8N5R6 ELL2P1-201ENST00000413990 1906 ntBASIC17.62■□□□□ 0.41
CCDC33Q8N5R6 RDH13-223ENST00000610356 1931 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
CCDC33Q8N5R6 PPP1R3E-201ENST00000452015 4773 ntAPPRIS P1 TSL 2 BASIC17.62■□□□□ 0.41
CCDC33Q8N5R6 RANBP9-201ENST00000011619 3113 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
CCDC33Q8N5R6 LIFR-202ENST00000453190 4253 ntAPPRIS P1 TSL 2 BASIC17.62■□□□□ 0.41
CCDC33Q8N5R6 TRMT44-201ENST00000389737 2799 ntAPPRIS P2 TSL 5 BASIC17.62■□□□□ 0.41
CCDC33Q8N5R6 DCST1-202ENST00000368419 2207 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
CCDC33Q8N5R6 HHIPL1-201ENST00000330710 7390 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
CCDC33Q8N5R6 DMRTC2-204ENST00000596827 1675 ntTSL 2 BASIC17.61■□□□□ 0.41
CCDC33Q8N5R6 C1QTNF1-202ENST00000339142 3100 ntAPPRIS P1 TSL 5 BASIC17.61■□□□□ 0.41
CCDC33Q8N5R6 THSD1-202ENST00000349258 3189 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
CCDC33Q8N5R6 NFE2-202ENST00000435572 1762 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
CCDC33Q8N5R6 CAP2-202ENST00000378990 1812 ntTSL 2 BASIC17.61■□□□□ 0.41
CCDC33Q8N5R6 HS6ST2-203ENST00000406696 1818 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
CCDC33Q8N5R6 DTX2-201ENST00000324432 2769 ntAPPRIS P3 TSL 1 (best) BASIC17.61■□□□□ 0.41
CCDC33Q8N5R6 FBLIM1-202ENST00000375766 3695 ntAPPRIS P1 TSL 2 BASIC17.61■□□□□ 0.41
CCDC33Q8N5R6 AP002414.1-201ENST00000391405 1147 ntBASIC17.61■□□□□ 0.41
CCDC33Q8N5R6 ATP6V0CP3-201ENST00000417255 467 ntBASIC17.61■□□□□ 0.41
CCDC33Q8N5R6 AC005020.2-201ENST00000455905 830 ntAPPRIS P1 TSL 3 BASIC17.61■□□□□ 0.41
CCDC33Q8N5R6 SMN2-210ENST00000511812 867 ntTSL 2 BASIC17.61■□□□□ 0.41
CCDC33Q8N5R6 FAM118B-206ENST00000529731 1028 ntTSL 5 BASIC17.61■□□□□ 0.41
CCDC33Q8N5R6 KRT19P2-202ENST00000557173 1012 ntBASIC17.61■□□□□ 0.41
CCDC33Q8N5R6 OR7E47P-204ENST00000575924 449 ntBASIC17.61■□□□□ 0.41
CCDC33Q8N5R6 H3F3B-208ENST00000589599 576 ntAPPRIS P1 TSL 3 BASIC17.61■□□□□ 0.41
CCDC33Q8N5R6 MRPL34-205ENST00000600434 793 ntAPPRIS P2 TSL 3 BASIC17.61■□□□□ 0.41
CCDC33Q8N5R6 LINC02084-201ENST00000606069 1096 ntBASIC17.61■□□□□ 0.41
CCDC33Q8N5R6 GGTLC5P-201ENST00000617623 998 ntBASIC17.61■□□□□ 0.41
CCDC33Q8N5R6 AQP6-205ENST00000618286 829 ntTSL 5 BASIC17.61■□□□□ 0.41
CCDC33Q8N5R6 PODNL1-202ENST00000339560 2165 ntAPPRIS P3 TSL 1 (best) BASIC17.61■□□□□ 0.41
CCDC33Q8N5R6 IGSF8-205ENST00000614243 2191 ntAPPRIS P2 TSL 1 (best) BASIC17.61■□□□□ 0.41
CCDC33Q8N5R6 RHD-207ENST00000454452 1303 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
CCDC33Q8N5R6 LINC02415-201ENST00000508505 1315 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
CCDC33Q8N5R6 AL590787.1-201ENST00000568856 1315 ntBASIC17.61■□□□□ 0.41
CCDC33Q8N5R6 ASB16-AS1-201ENST00000585457 2213 ntTSL 2 BASIC17.61■□□□□ 0.41
CCDC33Q8N5R6 ETFA-203ENST00000557943 2287 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
CCDC33Q8N5R6 ZNF512B-201ENST00000369888 5919 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
CCDC33Q8N5R6 MIB2-217ENST00000504599 3311 ntAPPRIS ALT2 TSL 2 BASIC17.61■□□□□ 0.41
CCDC33Q8N5R6 FOXE1-201ENST00000375123 3462 ntAPPRIS P1 BASIC17.61■□□□□ 0.41
CCDC33Q8N5R6 SKP2-201ENST00000274254 1537 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
CCDC33Q8N5R6 CLDN7-201ENST00000360325 1542 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
CCDC33Q8N5R6 SLC38A6-202ENST00000354886 1730 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
CCDC33Q8N5R6 EVA1A-205ENST00000410113 1747 ntAPPRIS P2 TSL 3 BASIC17.61■□□□□ 0.41
CCDC33Q8N5R6 RNF19A-201ENST00000341084 4285 ntAPPRIS P1 TSL 5 BASIC17.61■□□□□ 0.41
CCDC33Q8N5R6 POC1A-201ENST00000296484 1898 ntAPPRIS P3 TSL 1 (best) BASIC17.61■□□□□ 0.41
CCDC33Q8N5R6 KLHDC3-202ENST00000326974 1909 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
CCDC33Q8N5R6 C14orf93-205ENST00000397379 1949 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
CCDC33Q8N5R6 C9orf62-201ENST00000623103 1924 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
CCDC33Q8N5R6 LRRC71-201ENST00000337428 1959 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
CCDC33Q8N5R6 NBL1-213ENST00000622566 2109 ntAPPRIS P3 TSL 4 BASIC17.6■□□□□ 0.41
CCDC33Q8N5R6 TSHZ1-204ENST00000580243 3582 ntAPPRIS P1 TSL 2 BASIC17.6■□□□□ 0.41
CCDC33Q8N5R6 ZNF454-201ENST00000320129 2332 ntAPPRIS P1 TSL 2 BASIC17.6■□□□□ 0.41
CCDC33Q8N5R6 AASDHPPT-201ENST00000278618 2955 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
CCDC33Q8N5R6 JADE2-202ENST00000361895 3212 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
CCDC33Q8N5R6 ABHD15-201ENST00000307201 3592 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
CCDC33Q8N5R6 MFSD13A-202ENST00000369931 823 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
CCDC33Q8N5R6 GOSR2-202ENST00000393456 788 ntTSL 3 BASIC17.6■□□□□ 0.41
CCDC33Q8N5R6 AC006042.2-201ENST00000428660 568 ntTSL 4 BASIC17.6■□□□□ 0.41
CCDC33Q8N5R6 MKNK2P1-201ENST00000437526 628 ntBASIC17.6■□□□□ 0.41
CCDC33Q8N5R6 RPL8-207ENST00000528957 1015 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
CCDC33Q8N5R6 AC096734.2-201ENST00000562054 433 ntBASIC17.6■□□□□ 0.41
CCDC33Q8N5R6 PDPK2P-202ENST00000562415 1191 ntBASIC17.6■□□□□ 0.41
CCDC33Q8N5R6 AL031432.2-201ENST00000566714 459 ntBASIC17.6■□□□□ 0.41
CCDC33Q8N5R6 AL928711.1-201ENST00000570165 459 ntBASIC17.6■□□□□ 0.41
CCDC33Q8N5R6 CLN6-202ENST00000538696 1343 ntTSL 2 BASIC17.6■□□□□ 0.41
CCDC33Q8N5R6 SPSB1-202ENST00000357898 1439 ntAPPRIS P1 TSL 5 BASIC17.6■□□□□ 0.41
CCDC33Q8N5R6 CCDC28B-202ENST00000421922 1415 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
CCDC33Q8N5R6 HYAL3-205ENST00000450982 1402 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
CCDC33Q8N5R6 AC025580.3-201ENST00000617932 1424 ntBASIC17.6■□□□□ 0.41
CCDC33Q8N5R6 TRPC1-201ENST00000273482 4324 ntAPPRIS P3 TSL 1 (best) BASIC17.6■□□□□ 0.41
CCDC33Q8N5R6 PC-214ENST00000628663 1470 ntTSL 5 BASIC17.6■□□□□ 0.41
CCDC33Q8N5R6 TRAPPC11-201ENST00000334690 4552 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
CCDC33Q8N5R6 PI4KAP1-204ENST00000612579 1703 ntBASIC17.6■□□□□ 0.41
CCDC33Q8N5R6 CD300A-202ENST00000360141 1858 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
CCDC33Q8N5R6 ACSM2B-211ENST00000567001 1988 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
CCDC33Q8N5R6 AC078925.2-201ENST00000624013 1973 ntBASIC17.6■□□□□ 0.41
CCDC33Q8N5R6 FOXRED2-203ENST00000397223 2184 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
CCDC33Q8N5R6 SLC5A2-201ENST00000330498 2271 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
CCDC33Q8N5R6 SLC45A1-202ENST00000471889 2784 ntTSL 5 BASIC17.6■□□□□ 0.41
CCDC33Q8N5R6 LEF1-201ENST00000265165 3068 ntAPPRIS P3 TSL 1 (best) BASIC17.6■□□□□ 0.41
CCDC33Q8N5R6 VIPR2-201ENST00000262178 3944 ntAPPRIS P2 TSL 1 (best) BASIC17.6■□□□□ 0.41
CCDC33Q8N5R6 MYH14-202ENST00000376970 6787 ntAPPRIS ALT2 TSL 5 BASIC17.59■□□□□ 0.41
CCDC33Q8N5R6 LTBP4-205ENST00000396819 4764 ntAPPRIS ALT2 TSL 1 (best) BASIC17.59■□□□□ 0.41
CCDC33Q8N5R6 VPS13B-201ENST00000355155 2822 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
Retrieved 100 of 98,524 protein–RNA pairs in 25 ms