Protein–RNA interactions for Protein: Q8N1V8

LINC01561, Uncharacterized protein encoded by LINC01561, humanhuman

Predictions only

Length 128 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01561Q8N1V8 MINOS1P3-201ENST00000457048 203 ntBASIC11.3□□□□□ -0.6
LINC01561Q8N1V8 HOXB-AS4-202ENST00000480386 566 ntTSL 4 BASIC11.3□□□□□ -0.6
LINC01561Q8N1V8 AC093827.2-201ENST00000512654 315 ntBASIC11.3□□□□□ -0.6
LINC01561Q8N1V8 AC010463.1-201ENST00000596542 1207 ntAPPRIS P1 TSL 2 BASIC11.3□□□□□ -0.6
LINC01561Q8N1V8 GFOD2-207ENST00000602855 819 ntTSL 3 BASIC11.3□□□□□ -0.6
LINC01561Q8N1V8 MED16-213ENST00000616387 1078 ntTSL 1 (best) BASIC11.3□□□□□ -0.6
LINC01561Q8N1V8 CALM2-209ENST00000628793 1103 ntTSL 5 BASIC11.3□□□□□ -0.6
LINC01561Q8N1V8 DMRTC2-201ENST00000269945 1792 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
LINC01561Q8N1V8 CHN1-205ENST00000409900 2447 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
LINC01561Q8N1V8 MFSD1-203ENST00000415822 2423 ntTSL 1 (best) BASIC11.3□□□□□ -0.6
LINC01561Q8N1V8 ADAM8-205ENST00000485491 2441 ntTSL 2 BASIC11.3□□□□□ -0.6
LINC01561Q8N1V8 INTS14-209ENST00000567744 2419 ntTSL 2 BASIC11.3□□□□□ -0.6
LINC01561Q8N1V8 ABHD15-201ENST00000307201 3592 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
LINC01561Q8N1V8 AC100830.1-201ENST00000560387 1609 ntTSL 2 BASIC11.3□□□□□ -0.6
LINC01561Q8N1V8 NETO2-202ENST00000562435 7481 ntAPPRIS P3 TSL 1 (best) BASIC11.3□□□□□ -0.6
LINC01561Q8N1V8 PRDM6-201ENST00000407847 9267 ntAPPRIS P1 TSL 5 BASIC11.3□□□□□ -0.6
LINC01561Q8N1V8 FAM57B-201ENST00000279389 1481 ntTSL 1 (best) BASIC11.3□□□□□ -0.6
LINC01561Q8N1V8 ELF2-207ENST00000510408 1965 ntTSL 1 (best) BASIC11.3□□□□□ -0.6
LINC01561Q8N1V8 IKBKE-204ENST00000584998 2487 ntTSL 1 (best) BASIC11.3□□□□□ -0.6
LINC01561Q8N1V8 PDCL3-201ENST00000264254 1337 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
LINC01561Q8N1V8 COL23A1-202ENST00000407622 2329 ntAPPRIS ALT2 TSL 5 BASIC11.3□□□□□ -0.6
LINC01561Q8N1V8 AC007950.2-201ENST00000615045 2347 ntBASIC11.3□□□□□ -0.6
LINC01561Q8N1V8 EGLN2-207ENST00000593726 2821 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
LINC01561Q8N1V8 SWSAP1-201ENST00000312423 1684 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
LINC01561Q8N1V8 PDE4DIP-230ENST00000530472 1690 ntTSL 1 (best) BASIC11.3□□□□□ -0.6
LINC01561Q8N1V8 AC006063.2-201ENST00000640161 1696 ntTSL 5 BASIC11.3□□□□□ -0.6
LINC01561Q8N1V8 LSP1-202ENST00000381775 2016 ntAPPRIS ALT2 TSL 2 BASIC11.3□□□□□ -0.6
LINC01561Q8N1V8 KCNQ2-215ENST00000629241 2853 ntTSL 5 BASIC11.3□□□□□ -0.6
LINC01561Q8N1V8 C19orf48-201ENST00000345523 1503 ntAPPRIS P1 TSL 2 BASIC11.3□□□□□ -0.6
LINC01561Q8N1V8 PRDM8-201ENST00000339711 4095 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
LINC01561Q8N1V8 CD68-201ENST00000250092 1878 ntAPPRIS P3 TSL 1 (best) BASIC11.29□□□□□ -0.6
LINC01561Q8N1V8 TINF2-208ENST00000558566 1874 ntAPPRIS ALT2 TSL 2 BASIC11.29□□□□□ -0.6
LINC01561Q8N1V8 FAM189B-202ENST00000361361 3082 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
LINC01561Q8N1V8 OGFRL1-201ENST00000370435 8391 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
LINC01561Q8N1V8 AC233702.3-201ENST00000578656 1387 ntBASIC11.29□□□□□ -0.6
LINC01561Q8N1V8 TTC29-202ENST00000398886 1729 ntAPPRIS ALT2 TSL 5 BASIC11.29□□□□□ -0.6
LINC01561Q8N1V8 PCMTD1-206ENST00000521344 1712 ntTSL 3 BASIC11.29□□□□□ -0.6
LINC01561Q8N1V8 AC005920.1-201ENST00000501718 2054 ntTSL 2 BASIC11.29□□□□□ -0.6
LINC01561Q8N1V8 GIT2-220ENST00000553118 2424 ntTSL 5 BASIC11.29□□□□□ -0.6
LINC01561Q8N1V8 SYNDIG1L-202ENST00000554823 2420 ntAPPRIS P1 TSL 3 BASIC11.29□□□□□ -0.6
LINC01561Q8N1V8 CLUH-202ENST00000570628 5244 ntAPPRIS P2 TSL 2 BASIC11.29□□□□□ -0.6
LINC01561Q8N1V8 EWSR1-201ENST00000331029 2267 ntTSL 5 BASIC11.29□□□□□ -0.6
LINC01561Q8N1V8 LYAR-201ENST00000343470 1569 ntAPPRIS P2 TSL 1 (best) BASIC11.29□□□□□ -0.6
LINC01561Q8N1V8 FOXP3-202ENST00000376199 2274 ntTSL 2 BASIC11.29□□□□□ -0.6
LINC01561Q8N1V8 ALOX12P2-203ENST00000570921 1945 ntBASIC11.29□□□□□ -0.6
LINC01561Q8N1V8 GP5-201ENST00000401815 3534 ntAPPRIS P1 BASIC11.29□□□□□ -0.6
LINC01561Q8N1V8 GRAMD2B-201ENST00000285689 3175 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
LINC01561Q8N1V8 KRT8P39-201ENST00000396270 1433 ntBASIC11.29□□□□□ -0.6
LINC01561Q8N1V8 RIMS1-210ENST00000491071 5047 ntTSL 5 BASIC11.29□□□□□ -0.6
LINC01561Q8N1V8 INPP5K-201ENST00000320345 2880 ntTSL 5 BASIC11.29□□□□□ -0.6
LINC01561Q8N1V8 HSPA1B-201ENST00000375650 2521 ntAPPRIS P1 BASIC11.29□□□□□ -0.6
LINC01561Q8N1V8 GCFC2-202ENST00000409857 2516 ntTSL 5 BASIC11.29□□□□□ -0.6
LINC01561Q8N1V8 TRIP10-201ENST00000313244 2153 ntTSL 1 (best) BASIC11.29□□□□□ -0.6
LINC01561Q8N1V8 PGLS-201ENST00000252603 1028 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
LINC01561Q8N1V8 DYNLL1-203ENST00000392509 814 ntAPPRIS P1 TSL 3 BASIC11.29□□□□□ -0.6
LINC01561Q8N1V8 DRAXINP1-201ENST00000437611 948 ntBASIC11.29□□□□□ -0.6
LINC01561Q8N1V8 IDH3B-206ENST00000474315 1279 ntAPPRIS ALT1 TSL 1 (best) BASIC11.29□□□□□ -0.6
LINC01561Q8N1V8 ZNF706-204ENST00000518336 501 ntAPPRIS P1 TSL 4 BASIC11.29□□□□□ -0.6
LINC01561Q8N1V8 BARHL1-202ENST00000542090 1197 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
LINC01561Q8N1V8 AC126696.3-202ENST00000570159 553 ntTSL 5 BASIC11.29□□□□□ -0.6
LINC01561Q8N1V8 MIR22HG-204ENST00000571595 767 ntTSL 5 BASIC11.29□□□□□ -0.6
LINC01561Q8N1V8 GNAS-AS1-203ENST00000598163 548 ntTSL 4 BASIC11.29□□□□□ -0.6
LINC01561Q8N1V8 AL353135.1-201ENST00000606729 504 ntBASIC11.29□□□□□ -0.6
LINC01561Q8N1V8 NDUFV2-AS1-203ENST00000608008 779 ntBASIC11.29□□□□□ -0.6
LINC01561Q8N1V8 AC114341.1-201ENST00000618070 349 ntBASIC11.29□□□□□ -0.6
LINC01561Q8N1V8 AL121956.5-201ENST00000625261 221 ntBASIC11.29□□□□□ -0.6
LINC01561Q8N1V8 WDR88-202ENST00000361680 1835 ntAPPRIS ALT2 TSL 1 (best) BASIC11.29□□□□□ -0.6
LINC01561Q8N1V8 FUT7-201ENST00000314412 2584 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
LINC01561Q8N1V8 AC018716.2-201ENST00000528390 2597 ntTSL 2 BASIC11.29□□□□□ -0.6
LINC01561Q8N1V8 DHRS1-201ENST00000288111 1480 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
LINC01561Q8N1V8 TLE3-212ENST00000558201 2766 ntTSL 5 BASIC11.29□□□□□ -0.6
LINC01561Q8N1V8 CRAMP1-202ENST00000397412 7772 ntAPPRIS P1 TSL 5 BASIC11.29□□□□□ -0.6
LINC01561Q8N1V8 SLC17A7-204ENST00000600601 2237 ntTSL 2 BASIC11.29□□□□□ -0.6
LINC01561Q8N1V8 DCLK2-201ENST00000296550 4265 ntAPPRIS P3 TSL 1 (best) BASIC11.29□□□□□ -0.6
LINC01561Q8N1V8 ATP5S-201ENST00000245448 1671 ntTSL 1 (best) BASIC11.29□□□□□ -0.6
LINC01561Q8N1V8 CALHM3-201ENST00000369783 1652 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
LINC01561Q8N1V8 C2orf81-206ENST00000640868 2407 ntAPPRIS ALT2 BASIC11.29□□□□□ -0.6
LINC01561Q8N1V8 MEN1-207ENST00000377326 3150 ntAPPRIS ALT1 TSL 5 BASIC11.29□□□□□ -0.6
LINC01561Q8N1V8 CTCF-201ENST00000264010 3939 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
LINC01561Q8N1V8 PRMT2-208ENST00000451211 1878 ntTSL 1 (best) BASIC11.29□□□□□ -0.6
LINC01561Q8N1V8 HCFC1-201ENST00000310441 8869 ntAPPRIS P2 TSL 1 (best) BASIC11.29□□□□□ -0.6
LINC01561Q8N1V8 AL590787.1-201ENST00000568856 1315 ntBASIC11.29□□□□□ -0.6
LINC01561Q8N1V8 EIF4A1-203ENST00000577269 1319 ntTSL 1 (best) BASIC11.29□□□□□ -0.6
LINC01561Q8N1V8 AMZ2P1-202ENST00000430983 3425 ntTSL 2 BASIC11.29□□□□□ -0.6
LINC01561Q8N1V8 C11orf68-203ENST00000530188 1528 ntAPPRIS ALT2 BASIC11.29□□□□□ -0.6
LINC01561Q8N1V8 LCMT2-202ENST00000567039 1545 ntTSL 2 BASIC11.29□□□□□ -0.6
LINC01561Q8N1V8 ARVCF-204ENST00000406522 2682 ntTSL 5 BASIC11.29□□□□□ -0.6
LINC01561Q8N1V8 CD276-213ENST00000561213 2690 ntAPPRIS ALT2 TSL 2 BASIC11.29□□□□□ -0.6
LINC01561Q8N1V8 FGF11-201ENST00000293829 3063 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
LINC01561Q8N1V8 NAF1-201ENST00000274054 1907 ntAPPRIS P3 TSL 1 (best) BASIC11.29□□□□□ -0.6
LINC01561Q8N1V8 OSGIN1-203ENST00000393306 1940 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
LINC01561Q8N1V8 CRY1-201ENST00000008527 3267 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
LINC01561Q8N1V8 FRMD5-202ENST00000417257 5011 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
LINC01561Q8N1V8 ILVBL-201ENST00000263383 2304 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
LINC01561Q8N1V8 APOPT1-201ENST00000409074 2523 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
LINC01561Q8N1V8 AL139300.1-201ENST00000472726 2505 ntAPPRIS P1 TSL 2 BASIC11.29□□□□□ -0.6
LINC01561Q8N1V8 NTRK3-202ENST00000355254 2938 ntAPPRIS ALT2 TSL 5 BASIC11.29□□□□□ -0.6
LINC01561Q8N1V8 PIGF-201ENST00000281382 1372 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
LINC01561Q8N1V8 SEPT5-204ENST00000406395 1974 ntTSL 5 BASIC11.28□□□□□ -0.6
LINC01561Q8N1V8 RALYL-208ENST00000522455 2168 ntAPPRIS ALT2 TSL 2 BASIC11.28□□□□□ -0.6
Retrieved 100 of 98,524 protein–RNA pairs in 50.2 ms