Protein–RNA interactions for Protein: Q7Z398

ZNF550, Zinc finger protein 550, humanhuman

Predictions only

Length 422 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF550Q7Z398 PLXDC2-202ENST00000377242 2822 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
ZNF550Q7Z398 MMP15-201ENST00000219271 4250 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
ZNF550Q7Z398 NBL1-210ENST00000615215 2160 ntAPPRIS ALT2 TSL 1 (best) BASIC15.48■□□□□ 0.07
ZNF550Q7Z398 TVP23C-201ENST00000225576 1527 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
ZNF550Q7Z398 KPNA2-202ENST00000537025 2456 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
ZNF550Q7Z398 SH2D2A-202ENST00000368199 1658 ntAPPRIS P3 TSL 1 (best) BASIC15.48■□□□□ 0.07
ZNF550Q7Z398 AGTPBP1-201ENST00000337006 4473 ntTSL 5 BASIC15.47■□□□□ 0.07
ZNF550Q7Z398 ICMT-201ENST00000343813 4771 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
ZNF550Q7Z398 SARDH-202ENST00000371867 1326 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
ZNF550Q7Z398 ARFGAP1-220ENST00000547204 1327 ntTSL 2 BASIC15.47■□□□□ 0.07
ZNF550Q7Z398 ILDR1-203ENST00000393631 1456 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
ZNF550Q7Z398 GHR-201ENST00000230882 4560 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
ZNF550Q7Z398 SLC38A11-202ENST00000409058 1647 ntAPPRIS ALT2 TSL 5 BASIC15.47■□□□□ 0.07
ZNF550Q7Z398 STIM2-203ENST00000467011 3925 ntAPPRIS ALT2 TSL 1 (best) BASIC15.47■□□□□ 0.07
ZNF550Q7Z398 ZFYVE28-208ENST00000511071 3273 ntAPPRIS ALT2 TSL 5 BASIC15.47■□□□□ 0.07
ZNF550Q7Z398 ZDHHC24-201ENST00000310442 4721 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
ZNF550Q7Z398 ACTRT2-201ENST00000378404 1421 ntAPPRIS P1 BASIC15.47■□□□□ 0.07
ZNF550Q7Z398 IGHV3-15-201ENST00000390603 437 ntAPPRIS P1 BASIC15.47■□□□□ 0.07
ZNF550Q7Z398 FERMT2-203ENST00000395631 3369 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
ZNF550Q7Z398 TIMM17B-202ENST00000396779 1099 ntTSL 5 BASIC15.47■□□□□ 0.07
ZNF550Q7Z398 LINC00894-202ENST00000425602 1597 ntTSL 2 BASIC15.47■□□□□ 0.07
ZNF550Q7Z398 MOBP-208ENST00000441980 830 ntAPPRIS P4 TSL 4 BASIC15.47■□□□□ 0.07
ZNF550Q7Z398 AL589182.1-202ENST00000548416 533 ntTSL 4 BASIC15.47■□□□□ 0.07
ZNF550Q7Z398 RPL18-208ENST00000549920 1004 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
ZNF550Q7Z398 SLC8B1-210ENST00000550047 2493 ntTSL 2 BASIC15.47■□□□□ 0.07
ZNF550Q7Z398 RPL18-209ENST00000550645 463 ntTSL 5 BASIC15.47■□□□□ 0.07
ZNF550Q7Z398 RPL18-214ENST00000552588 559 ntTSL 3 BASIC15.47■□□□□ 0.07
ZNF550Q7Z398 SEC23A-206ENST00000553970 574 ntTSL 4 BASIC15.47■□□□□ 0.07
ZNF550Q7Z398 L2HGDH-205ENST00000555423 841 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
ZNF550Q7Z398 UBE2Q2P1-205ENST00000559871 534 ntTSL 5 BASIC15.47■□□□□ 0.07
ZNF550Q7Z398 AC012640.2-201ENST00000561606 901 ntBASIC15.47■□□□□ 0.07
ZNF550Q7Z398 AC106730.1-201ENST00000566722 1090 ntBASIC15.47■□□□□ 0.07
ZNF550Q7Z398 NUBP2-214ENST00000568706 913 ntTSL 2 BASIC15.47■□□□□ 0.07
ZNF550Q7Z398 GRTP1-205ENST00000620217 1073 ntTSL 2 BASIC15.47■□□□□ 0.07
ZNF550Q7Z398 AC092902.2-205ENST00000622381 394 ntTSL 5 BASIC15.47■□□□□ 0.07
ZNF550Q7Z398 BX276092.9-201ENST00000636797 1563 ntAPPRIS ALT2 TSL 5 BASIC15.47■□□□□ 0.07
ZNF550Q7Z398 EPB41L3-207ENST00000545076 3190 ntAPPRIS ALT2 TSL 2 BASIC15.47■□□□□ 0.07
ZNF550Q7Z398 RBM47-212ENST00000514014 2419 ntTSL 2 BASIC15.47■□□□□ 0.07
ZNF550Q7Z398 BNC1-201ENST00000345382 4610 ntAPPRIS P3 TSL 1 (best) BASIC15.47■□□□□ 0.07
ZNF550Q7Z398 SCAF1-201ENST00000360565 4306 ntAPPRIS P2 TSL 2 BASIC15.47■□□□□ 0.07
ZNF550Q7Z398 AC226118.1-201ENST00000515213 2146 ntTSL 2 BASIC15.47■□□□□ 0.07
ZNF550Q7Z398 ADARB2-203ENST00000381312 8421 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
ZNF550Q7Z398 CACNB3-203ENST00000540990 1814 ntTSL 2 BASIC15.47■□□□□ 0.07
ZNF550Q7Z398 STK35-201ENST00000381482 6685 ntAPPRIS P1 TSL 5 BASIC15.47■□□□□ 0.07
ZNF550Q7Z398 HSF5-201ENST00000323777 4094 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
ZNF550Q7Z398 TMC5-202ENST00000381414 4755 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
ZNF550Q7Z398 SHISA6-204ENST00000441885 7575 ntAPPRIS P3 TSL 5 BASIC15.47■□□□□ 0.07
ZNF550Q7Z398 HMGXB3-202ENST00000503427 5275 ntAPPRIS ALT2 TSL 5 BASIC15.46■□□□□ 0.07
ZNF550Q7Z398 AC083864.1-201ENST00000381493 1497 ntTSL 1 (best) BASIC15.46■□□□□ 0.07
ZNF550Q7Z398 HNF1A-212ENST00000544413 2014 ntTSL 1 (best) BASIC15.46■□□□□ 0.07
ZNF550Q7Z398 AMT-206ENST00000458307 1860 ntTSL 2 BASIC15.46■□□□□ 0.07
ZNF550Q7Z398 PC-204ENST00000524491 1714 ntTSL 2 BASIC15.46■□□□□ 0.07
ZNF550Q7Z398 SENP1-204ENST00000549518 2260 ntAPPRIS P2 TSL 1 (best) BASIC15.46■□□□□ 0.07
ZNF550Q7Z398 MRFAP1-205ENST00000617365 2112 ntTSL 5 BASIC15.46■□□□□ 0.07
ZNF550Q7Z398 PITPNA-202ENST00000539476 3612 ntAPPRIS ALT1 TSL 5 BASIC15.46■□□□□ 0.07
ZNF550Q7Z398 TSPAN4-205ENST00000397406 1426 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
ZNF550Q7Z398 C17orf113-201ENST00000587304 3746 ntAPPRIS P1 TSL 5 BASIC15.46■□□□□ 0.07
ZNF550Q7Z398 PALM-201ENST00000264560 2755 ntAPPRIS ALT2 TSL 4 BASIC15.46■□□□□ 0.07
ZNF550Q7Z398 ISCA2-201ENST00000298818 851 ntTSL 5 BASIC15.46■□□□□ 0.07
ZNF550Q7Z398 OTOS-202ENST00000391989 645 ntAPPRIS P1 TSL 3 BASIC15.46■□□□□ 0.07
ZNF550Q7Z398 HCG15-203ENST00000438190 1032 ntTSL 3 BASIC15.46■□□□□ 0.07
ZNF550Q7Z398 KRT18P58-201ENST00000527480 1120 ntBASIC15.46■□□□□ 0.07
ZNF550Q7Z398 RPL27-206ENST00000589913 697 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
ZNF550Q7Z398 AC018529.2-201ENST00000612024 828 ntTSL 4 BASIC15.46■□□□□ 0.07
ZNF550Q7Z398 TMEM178A-206ENST00000618232 1286 ntTSL 5 BASIC15.46■□□□□ 0.07
ZNF550Q7Z398 MIR1199-201ENST00000621445 119 ntBASIC15.46■□□□□ 0.07
ZNF550Q7Z398 FAM238C-204ENST00000640224 1268 ntTSL 5 BASIC15.46■□□□□ 0.07
ZNF550Q7Z398 CHGA-201ENST00000216492 2063 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
ZNF550Q7Z398 RUNDC3B-203ENST00000394654 2064 ntAPPRIS P4 TSL 2 BASIC15.46■□□□□ 0.07
ZNF550Q7Z398 TNK2-AS1-201ENST00000458180 2096 ntTSL 2 BASIC15.46■□□□□ 0.07
ZNF550Q7Z398 SH2B3-202ENST00000538307 2062 ntTSL 2 BASIC15.46■□□□□ 0.07
ZNF550Q7Z398 YPEL3-203ENST00000562641 1941 ntTSL 3 BASIC15.46■□□□□ 0.07
ZNF550Q7Z398 PURB-201ENST00000395699 9069 ntAPPRIS P1 BASIC15.46■□□□□ 0.07
ZNF550Q7Z398 DCAF12L2-201ENST00000360028 2599 ntAPPRIS P1 BASIC15.46■□□□□ 0.07
ZNF550Q7Z398 CSNK1A1L-201ENST00000379800 2406 ntAPPRIS P1 BASIC15.46■□□□□ 0.07
ZNF550Q7Z398 AC002310.6-201ENST00000624451 1377 ntBASIC15.46■□□□□ 0.07
ZNF550Q7Z398 SEPT9-202ENST00000423034 3984 ntAPPRIS ALT1 TSL 1 (best) BASIC15.46■□□□□ 0.06
ZNF550Q7Z398 SCUBE2-202ENST00000450649 2912 ntTSL 1 (best) BASIC15.46■□□□□ 0.06
ZNF550Q7Z398 CLIC5-202ENST00000339561 2390 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.06
ZNF550Q7Z398 SIGLEC7-201ENST00000305628 1469 ntTSL 1 (best) BASIC15.46■□□□□ 0.06
ZNF550Q7Z398 AC062028.1-203ENST00000447433 1472 ntTSL 1 (best) BASIC15.46■□□□□ 0.06
ZNF550Q7Z398 NFASC-205ENST00000403080 2462 ntTSL 2 BASIC15.45■□□□□ 0.06
ZNF550Q7Z398 BICD1-205ENST00000550207 1328 ntTSL 3 BASIC15.45■□□□□ 0.06
ZNF550Q7Z398 LDLRAP1-201ENST00000374338 2940 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
ZNF550Q7Z398 CLIP4-201ENST00000320081 4293 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
ZNF550Q7Z398 C3orf58-201ENST00000315691 4346 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
ZNF550Q7Z398 REL-202ENST00000394479 2398 ntAPPRIS ALT2 TSL 1 (best) BASIC15.45■□□□□ 0.06
ZNF550Q7Z398 UBR5-207ENST00000520539 10297 ntAPPRIS P3 TSL 1 (best) BASIC15.45■□□□□ 0.06
ZNF550Q7Z398 LYPLA2-204ENST00000374505 907 ntTSL 3 BASIC15.45■□□□□ 0.06
ZNF550Q7Z398 KRT18P27-201ENST00000427733 1299 ntBASIC15.45■□□□□ 0.06
ZNF550Q7Z398 RPS15P9-201ENST00000494093 319 ntBASIC15.45■□□□□ 0.06
ZNF550Q7Z398 AC136632.2-201ENST00000512891 861 ntBASIC15.45■□□□□ 0.06
ZNF550Q7Z398 AC103957.2-201ENST00000521218 510 ntTSL 2 BASIC15.45■□□□□ 0.06
ZNF550Q7Z398 EEF1D-238ENST00000531621 840 ntTSL 3 BASIC15.45■□□□□ 0.06
ZNF550Q7Z398 FAU-209ENST00000531743 697 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
ZNF550Q7Z398 AL450267.1-201ENST00000557174 520 ntTSL 5 BASIC15.45■□□□□ 0.06
ZNF550Q7Z398 ZFPM1-204ENST00000563351 808 ntTSL 2 BASIC15.45■□□□□ 0.06
ZNF550Q7Z398 AC091167.2-201ENST00000579581 588 ntBASIC15.45■□□□□ 0.06
ZNF550Q7Z398 PGM5P2-202ENST00000637225 1043 ntBASIC15.45■□□□□ 0.06
ZNF550Q7Z398 GYG1-201ENST00000296048 1890 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
Retrieved 100 of 98,524 protein–RNA pairs in 27.6 ms