Protein–RNA interactions for Protein: Q6ZMY6

WDR88, WD repeat-containing protein 88, humanhuman

Predictions only

Length 472 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
WDR88Q6ZMY6 DIXDC1-208ENST00000615255 4825 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
WDR88Q6ZMY6 HIST1H2AK-201ENST00000618958 393 ntAPPRIS P1 BASIC15.3■□□□□ 0.04
WDR88Q6ZMY6 PSEN2-211ENST00000626989 1972 ntTSL 5 BASIC15.3■□□□□ 0.04
WDR88Q6ZMY6 AF228730.7-201ENST00000641842 219 ntBASIC15.3■□□□□ 0.04
WDR88Q6ZMY6 ASTN2-202ENST00000313400 4747 ntAPPRIS ALT2 TSL 5 BASIC15.3■□□□□ 0.04
WDR88Q6ZMY6 ADGRG2-202ENST00000354791 4494 ntTSL 5 BASIC15.3■□□□□ 0.04
WDR88Q6ZMY6 PIAS4-201ENST00000262971 3159 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
WDR88Q6ZMY6 PLIN1-202ENST00000430628 2900 ntAPPRIS P1 TSL 5 BASIC15.3■□□□□ 0.04
WDR88Q6ZMY6 CBWD5-204ENST00000377392 2863 ntTSL 2 BASIC15.3■□□□□ 0.04
WDR88Q6ZMY6 AGK-211ENST00000629555 2765 ntTSL 5 BASIC15.3■□□□□ 0.04
WDR88Q6ZMY6 GCFC2-202ENST00000409857 2516 ntTSL 5 BASIC15.3■□□□□ 0.04
WDR88Q6ZMY6 ZSCAN10-201ENST00000252463 2463 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
WDR88Q6ZMY6 ABLIM2-202ENST00000361581 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC15.29■□□□□ 0.04
WDR88Q6ZMY6 TSC22D4-201ENST00000300181 2383 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
WDR88Q6ZMY6 DAP-201ENST00000230895 2339 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
WDR88Q6ZMY6 AC105760.2-201ENST00000418430 2341 ntTSL 2 BASIC15.29■□□□□ 0.04
WDR88Q6ZMY6 CACNA1I-201ENST00000401624 6740 ntAPPRIS ALT2 TSL 1 (best) BASIC15.29■□□□□ 0.04
WDR88Q6ZMY6 MAP3K9-206ENST00000555993 4449 ntAPPRIS P3 TSL 1 (best) BASIC15.29■□□□□ 0.04
WDR88Q6ZMY6 VARS-215ENST00000375663 4312 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
WDR88Q6ZMY6 DZIP1L-204ENST00000469243 2107 ntAPPRIS ALT2 TSL 2 BASIC15.29■□□□□ 0.04
WDR88Q6ZMY6 CTSB-201ENST00000345125 2028 ntAPPRIS P1 TSL 5 BASIC15.29■□□□□ 0.04
WDR88Q6ZMY6 CD72-204ENST00000396757 2035 ntAPPRIS P2 TSL 5 BASIC15.29■□□□□ 0.04
WDR88Q6ZMY6 MAP3K9-201ENST00000381250 4025 ntAPPRIS ALT2 TSL 5 BASIC15.29■□□□□ 0.04
WDR88Q6ZMY6 AC009292.1-201ENST00000502156 1986 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
WDR88Q6ZMY6 MARCO-201ENST00000327097 1838 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
WDR88Q6ZMY6 ARHGEF4-205ENST00000409359 5489 ntTSL 5 BASIC15.29■□□□□ 0.04
WDR88Q6ZMY6 RANBP3-201ENST00000034275 1762 ntAPPRIS ALT2 TSL 1 (best) BASIC15.29■□□□□ 0.04
WDR88Q6ZMY6 CDIP1-207ENST00000564828 1636 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
WDR88Q6ZMY6 ZNF84-208ENST00000539354 3237 ntAPPRIS P2 TSL 1 (best) BASIC15.29■□□□□ 0.04
WDR88Q6ZMY6 SIGLEC7-201ENST00000305628 1469 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
WDR88Q6ZMY6 GPN3-202ENST00000537466 1491 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
WDR88Q6ZMY6 CROCCP1-201ENST00000426910 5675 ntBASIC15.29■□□□□ 0.04
WDR88Q6ZMY6 PTRHD1-201ENST00000328379 1105 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
WDR88Q6ZMY6 TRIM36-203ENST00000379618 693 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
WDR88Q6ZMY6 GYG2P1-204ENST00000382966 639 ntTSL 3 BASIC15.29■□□□□ 0.04
WDR88Q6ZMY6 AC073621.1-201ENST00000392730 636 ntBASIC15.29■□□□□ 0.04
WDR88Q6ZMY6 CYCS-202ENST00000409409 974 ntAPPRIS P1 TSL 3 BASIC15.29■□□□□ 0.04
WDR88Q6ZMY6 ELOB-202ENST00000409477 997 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
WDR88Q6ZMY6 RPS2P1-201ENST00000434010 821 ntBASIC15.29■□□□□ 0.04
WDR88Q6ZMY6 MRPL2-208ENST00000489623 570 ntTSL 2 BASIC15.29■□□□□ 0.04
WDR88Q6ZMY6 AC107918.2-201ENST00000530817 355 ntBASIC15.29■□□□□ 0.04
WDR88Q6ZMY6 MRPL49-206ENST00000531705 489 ntTSL 5 BASIC15.29■□□□□ 0.04
WDR88Q6ZMY6 SMIM22-210ENST00000615471 928 ntAPPRIS ALT2 TSL 3 BASIC15.29■□□□□ 0.04
WDR88Q6ZMY6 SBDS-205ENST00000617799 953 ntAPPRIS ALT1 TSL 5 BASIC15.29■□□□□ 0.04
WDR88Q6ZMY6 NR2C2-201ENST00000323373 2406 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
WDR88Q6ZMY6 SATB1-201ENST00000338745 7810 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
WDR88Q6ZMY6 HDHD2-201ENST00000300605 2212 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
WDR88Q6ZMY6 CPNE6-201ENST00000397016 2235 ntAPPRIS P1 TSL 2 BASIC15.29■□□□□ 0.04
WDR88Q6ZMY6 CPNE6-203ENST00000537691 2233 ntTSL 2 BASIC15.29■□□□□ 0.04
WDR88Q6ZMY6 KDM6B-202ENST00000448097 5422 ntAPPRIS ALT2 TSL 5 BASIC15.29■□□□□ 0.04
WDR88Q6ZMY6 KIAA1147-202ENST00000536163 7296 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
WDR88Q6ZMY6 ABCB10-201ENST00000344517 3857 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
WDR88Q6ZMY6 AC139530.2-201ENST00000571730 1922 ntAPPRIS P1 TSL 2 BASIC15.29■□□□□ 0.04
WDR88Q6ZMY6 ARMC6-203ENST00000392336 1866 ntTSL 2 BASIC15.29■□□□□ 0.04
WDR88Q6ZMY6 PCGF1-201ENST00000233630 1792 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
WDR88Q6ZMY6 SGO1-203ENST00000412997 2587 ntAPPRIS P4 TSL 1 (best) BASIC15.29■□□□□ 0.04
WDR88Q6ZMY6 HIBCH-202ENST00000392332 2463 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
WDR88Q6ZMY6 AP001372.2-201ENST00000526036 2493 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
WDR88Q6ZMY6 HLA-F-216ENST00000259951 1635 ntAPPRIS P4 BASIC15.28■□□□□ 0.04
WDR88Q6ZMY6 FAM83C-201ENST00000374408 3145 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
WDR88Q6ZMY6 PC-214ENST00000628663 1470 ntTSL 5 BASIC15.28■□□□□ 0.04
WDR88Q6ZMY6 PDE1C-201ENST00000321453 2898 ntAPPRIS ALT1 TSL 2 BASIC15.28■□□□□ 0.04
WDR88Q6ZMY6 SERINC2-202ENST00000373710 2146 ntTSL 2 BASIC15.28■□□□□ 0.04
WDR88Q6ZMY6 ARFGAP1-201ENST00000353546 2776 ntAPPRIS P4 TSL 1 (best) BASIC15.28■□□□□ 0.04
WDR88Q6ZMY6 KRT85-202ENST00000544265 1387 ntTSL 2 BASIC15.28■□□□□ 0.04
WDR88Q6ZMY6 CICP6-201ENST00000457191 2729 ntBASIC15.28■□□□□ 0.04
WDR88Q6ZMY6 TMEM216-201ENST00000334888 1306 ntAPPRIS ALT2 TSL 2 BASIC15.28■□□□□ 0.04
WDR88Q6ZMY6 BBS2-218ENST00000568104 2623 ntTSL 5 BASIC15.28■□□□□ 0.04
WDR88Q6ZMY6 PCDHGA12-202ENST00000613314 2634 ntAPPRIS ALT2 BASIC15.28■□□□□ 0.04
WDR88Q6ZMY6 PNMA6E-202ENST00000633844 2596 ntTSL 3 BASIC15.28■□□□□ 0.04
WDR88Q6ZMY6 EFCAB14-201ENST00000371933 5767 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
WDR88Q6ZMY6 TBC1D7-201ENST00000343141 1027 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
WDR88Q6ZMY6 HIST2H3DP1-201ENST00000401004 416 ntBASIC15.28■□□□□ 0.04
WDR88Q6ZMY6 PMS2P1-201ENST00000431037 1228 ntBASIC15.28■□□□□ 0.04
WDR88Q6ZMY6 AGBL5-AS1-201ENST00000444217 407 ntTSL 5 BASIC15.28■□□□□ 0.04
WDR88Q6ZMY6 LINC01615-202ENST00000449466 603 ntTSL 3 BASIC15.28■□□□□ 0.04
WDR88Q6ZMY6 C9orf147-204ENST00000463223 863 ntTSL 3 BASIC15.28■□□□□ 0.04
WDR88Q6ZMY6 AC080013.1-203ENST00000468242 720 ntTSL 5 BASIC15.28■□□□□ 0.04
WDR88Q6ZMY6 AC080013.1-201ENST00000495318 566 ntTSL 4 BASIC15.28■□□□□ 0.04
WDR88Q6ZMY6 IRF8-202ENST00000562492 946 ntTSL 3 BASIC15.28■□□□□ 0.04
WDR88Q6ZMY6 AC008992.1-201ENST00000591132 446 ntTSL 2 BASIC15.28■□□□□ 0.04
WDR88Q6ZMY6 CIRBP-235ENST00000591935 746 ntAPPRIS ALT1 TSL 3 BASIC15.28■□□□□ 0.04
WDR88Q6ZMY6 AC006557.2-201ENST00000592985 1240 ntBASIC15.28■□□□□ 0.04
WDR88Q6ZMY6 AL022328.2-201ENST00000608016 640 ntTSL 3 BASIC15.28■□□□□ 0.04
WDR88Q6ZMY6 SSBP1-215ENST00000612337 884 ntAPPRIS P1 TSL 2 BASIC15.28■□□□□ 0.04
WDR88Q6ZMY6 SMN2-213ENST00000614240 804 ntAPPRIS ALT2 TSL 5 BASIC15.28■□□□□ 0.04
WDR88Q6ZMY6 TST-204ENST00000622841 1105 ntAPPRIS P1 TSL 5 BASIC15.28■□□□□ 0.04
WDR88Q6ZMY6 TP73-AS1-207ENST00000624167 988 ntBASIC15.28■□□□□ 0.04
WDR88Q6ZMY6 FGFR4-201ENST00000292408 3122 ntAPPRIS P4 TSL 1 (best) BASIC15.28■□□□□ 0.04
WDR88Q6ZMY6 EIF2B4-212ENST00000622434 1771 ntTSL 5 BASIC15.28■□□□□ 0.04
WDR88Q6ZMY6 GFAP-233ENST00000639277 1783 ntTSL 5 BASIC15.28■□□□□ 0.04
WDR88Q6ZMY6 TAOK2-202ENST00000308893 5169 ntAPPRIS P4 TSL 1 (best) BASIC15.28■□□□□ 0.04
WDR88Q6ZMY6 BCAR1-206ENST00000535626 2894 ntTSL 2 BASIC15.28■□□□□ 0.04
WDR88Q6ZMY6 GGT4P-201ENST00000623672 1708 ntBASIC15.28■□□□□ 0.04
WDR88Q6ZMY6 STK17A-201ENST00000319357 3368 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
WDR88Q6ZMY6 BAP1-202ENST00000460680 3937 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
WDR88Q6ZMY6 WDR53-201ENST00000332629 1679 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
WDR88Q6ZMY6 CCDC183-201ENST00000338005 1671 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
WDR88Q6ZMY6 PPA2-201ENST00000341695 1684 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
WDR88Q6ZMY6 ADCY1-202ENST00000432715 1693 ntTSL 2 BASIC15.28■□□□□ 0.04
Retrieved 100 of 98,524 protein–RNA pairs in 58 ms