Protein–RNA interactions for Protein: Q6PIL6

KCNIP4, Kv channel-interacting protein 4, humanhuman

Predictions only

Length 250 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KCNIP4Q6PIL6 NT5C1A-201ENST00000235628 1107 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
KCNIP4Q6PIL6 AL355355.2-201ENST00000442321 338 ntBASIC13.05□□□□□ -0.32
KCNIP4Q6PIL6 BABAM1-202ENST00000447614 930 ntAPPRIS ALT2 TSL 5 BASIC13.05□□□□□ -0.32
KCNIP4Q6PIL6 SMIM29-206ENST00000476320 1297 ntAPPRIS P1 TSL 2 BASIC13.05□□□□□ -0.32
KCNIP4Q6PIL6 ALKAL1-202ENST00000523939 536 ntAPPRIS ALT2 TSL 1 (best) BASIC13.05□□□□□ -0.32
KCNIP4Q6PIL6 TESC-AS1-201ENST00000547006 1053 ntTSL 2 BASIC13.05□□□□□ -0.32
KCNIP4Q6PIL6 AC142381.4-202ENST00000563973 229 ntBASIC13.05□□□□□ -0.32
KCNIP4Q6PIL6 AC026271.3-201ENST00000571884 352 ntBASIC13.05□□□□□ -0.32
KCNIP4Q6PIL6 ARMC4P1-202ENST00000576034 643 ntTSL 2 BASIC13.05□□□□□ -0.32
KCNIP4Q6PIL6 RPS15-203ENST00000586096 570 ntTSL 2 BASIC13.05□□□□□ -0.32
KCNIP4Q6PIL6 CIRBP-235ENST00000591935 746 ntAPPRIS ALT1 TSL 3 BASIC13.05□□□□□ -0.32
KCNIP4Q6PIL6 AC011446.2-202ENST00000592882 756 ntTSL 3 BASIC13.05□□□□□ -0.32
KCNIP4Q6PIL6 Z94160.2-201ENST00000609322 910 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
KCNIP4Q6PIL6 COL26A1-203ENST00000613501 2970 ntAPPRIS ALT2 TSL 1 (best) BASIC13.05□□□□□ -0.32
KCNIP4Q6PIL6 S1PR2-201ENST00000590320 3582 ntAPPRIS P1 TSL 3 BASIC13.05□□□□□ -0.32
KCNIP4Q6PIL6 ZNF114-204ENST00000595607 2478 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
KCNIP4Q6PIL6 CACNA2D3-202ENST00000415676 3661 ntAPPRIS ALT2 TSL 1 (best) BASIC13.05□□□□□ -0.32
KCNIP4Q6PIL6 SMN1-209ENST00000514951 1308 ntTSL 2 BASIC13.05□□□□□ -0.32
KCNIP4Q6PIL6 TPD52L2-203ENST00000348257 2237 ntAPPRIS ALT1 TSL 1 (best) BASIC13.05□□□□□ -0.32
KCNIP4Q6PIL6 GUCA1A-203ENST00000394237 2233 ntAPPRIS P1 TSL 2 BASIC13.05□□□□□ -0.32
KCNIP4Q6PIL6 AC013268.4-201ENST00000637413 2228 ntBASIC13.05□□□□□ -0.32
KCNIP4Q6PIL6 PMS1-221ENST00000624204 3417 ntTSL 2 BASIC13.05□□□□□ -0.32
KCNIP4Q6PIL6 KDM3A-203ENST00000409556 4928 ntAPPRIS P1 TSL 5 BASIC13.05□□□□□ -0.32
KCNIP4Q6PIL6 ABTB2-201ENST00000435224 4902 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
KCNIP4Q6PIL6 HOXB6-203ENST00000484302 1960 ntAPPRIS P1 TSL 2 BASIC13.05□□□□□ -0.32
KCNIP4Q6PIL6 SSBP3-205ENST00000417664 1666 ntTSL 5 BASIC13.05□□□□□ -0.32
KCNIP4Q6PIL6 CEACAM16-202ENST00000587331 1692 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
KCNIP4Q6PIL6 CSF1-203ENST00000369801 1364 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
KCNIP4Q6PIL6 PLAGL1-208ENST00000437412 2640 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
KCNIP4Q6PIL6 GPM6A-210ENST00000506894 2614 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
KCNIP4Q6PIL6 CLCN2-201ENST00000265593 3290 ntAPPRIS P3 TSL 1 (best) BASIC13.05□□□□□ -0.32
KCNIP4Q6PIL6 PTPRK-218ENST00000525459 1722 ntTSL 2 BASIC13.05□□□□□ -0.32
KCNIP4Q6PIL6 TAF1B-201ENST00000263663 2387 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
KCNIP4Q6PIL6 AP003717.1-202ENST00000537019 1412 ntTSL 5 BASIC13.05□□□□□ -0.32
KCNIP4Q6PIL6 KRT17-205ENST00000540235 1438 ntTSL 5 BASIC13.05□□□□□ -0.32
KCNIP4Q6PIL6 TPBG-202ENST00000535040 3392 ntAPPRIS P1 TSL 2 BASIC13.04□□□□□ -0.32
KCNIP4Q6PIL6 ANK1-205ENST00000347528 8237 ntAPPRIS P4 TSL 1 (best) BASIC13.04□□□□□ -0.32
KCNIP4Q6PIL6 HMOX2-204ENST00000414777 1752 ntAPPRIS P1 TSL 5 BASIC13.04□□□□□ -0.32
KCNIP4Q6PIL6 INTS11-203ENST00000419704 1798 ntTSL 2 BASIC13.04□□□□□ -0.32
KCNIP4Q6PIL6 C17orf100-201ENST00000542475 1756 ntAPPRIS P1 BASIC13.04□□□□□ -0.32
KCNIP4Q6PIL6 LDLR-204ENST00000545707 2429 ntTSL 2 BASIC13.04□□□□□ -0.32
KCNIP4Q6PIL6 SPPL3-201ENST00000353487 4148 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
KCNIP4Q6PIL6 TIFA-201ENST00000361717 4157 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
KCNIP4Q6PIL6 LINC01136-203ENST00000457348 2539 ntTSL 2 BASIC13.04□□□□□ -0.32
KCNIP4Q6PIL6 PTPN23-201ENST00000265562 5244 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
KCNIP4Q6PIL6 PAPOLA-223ENST00000557320 3264 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
KCNIP4Q6PIL6 TEN1-CDK3-202ENST00000569284 3287 ntAPPRIS P1 TSL 2 BASIC13.04□□□□□ -0.32
KCNIP4Q6PIL6 KRT71-201ENST00000267119 2265 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
KCNIP4Q6PIL6 OSGIN1-203ENST00000393306 1940 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
KCNIP4Q6PIL6 PALLD-215ENST00000512127 2958 ntTSL 2 BASIC13.04□□□□□ -0.32
KCNIP4Q6PIL6 C2orf81-202ENST00000612891 1902 ntAPPRIS ALT2 TSL 5 BASIC13.04□□□□□ -0.32
KCNIP4Q6PIL6 CEMIP-201ENST00000220244 7226 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
KCNIP4Q6PIL6 GINS2-201ENST00000253462 2673 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
KCNIP4Q6PIL6 SIGIRR-220ENST00000531205 1649 ntTSL 2 BASIC13.04□□□□□ -0.32
KCNIP4Q6PIL6 SIVA1-201ENST00000329967 802 ntAPPRIS P2 TSL 1 (best) BASIC13.04□□□□□ -0.32
KCNIP4Q6PIL6 VSIG2-202ENST00000403470 1191 ntTSL 2 BASIC13.04□□□□□ -0.32
KCNIP4Q6PIL6 UBE2F-203ENST00000409633 837 ntTSL 3 BASIC13.04□□□□□ -0.32
KCNIP4Q6PIL6 AC004980.1-204ENST00000429707 299 ntBASIC13.04□□□□□ -0.32
KCNIP4Q6PIL6 RNF144A-AS1-205ENST00000439208 757 ntTSL 3 BASIC13.04□□□□□ -0.32
KCNIP4Q6PIL6 SFXN1-203ENST00000502393 637 ntTSL 2 BASIC13.04□□□□□ -0.32
KCNIP4Q6PIL6 CERNA3-201ENST00000521403 557 ntTSL 3 BASIC13.04□□□□□ -0.32
KCNIP4Q6PIL6 KDM2B-217ENST00000543852 1188 ntTSL 5 BASIC13.04□□□□□ -0.32
KCNIP4Q6PIL6 ISG20-210ENST00000560741 800 ntAPPRIS P1 TSL 5 BASIC13.04□□□□□ -0.32
KCNIP4Q6PIL6 MIR4651-201ENST00000582622 73 ntBASIC13.04□□□□□ -0.32
KCNIP4Q6PIL6 AC011298.2-201ENST00000617989 482 ntBASIC13.04□□□□□ -0.32
KCNIP4Q6PIL6 NTAN1-211ENST00000622833 1049 ntTSL 2 BASIC13.04□□□□□ -0.32
KCNIP4Q6PIL6 NTAN1-212ENST00000624579 1115 ntTSL 2 BASIC13.04□□□□□ -0.32
KCNIP4Q6PIL6 RNPS1-219ENST00000566397 1685 ntTSL 2 BASIC13.04□□□□□ -0.32
KCNIP4Q6PIL6 CCDC88A-204ENST00000413716 9586 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
KCNIP4Q6PIL6 NPAS1-201ENST00000439365 1341 ntTSL 2 BASIC13.04□□□□□ -0.32
KCNIP4Q6PIL6 DHRS4-204ENST00000543741 1340 ntTSL 2 BASIC13.04□□□□□ -0.32
KCNIP4Q6PIL6 TEX13A-202ENST00000609007 1349 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
KCNIP4Q6PIL6 TBX4-201ENST00000240335 2470 ntAPPRIS P3 TSL 1 (best) BASIC13.04□□□□□ -0.32
KCNIP4Q6PIL6 POFUT2-214ENST00000615172 2472 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
KCNIP4Q6PIL6 RBFADN-204ENST00000568911 5187 ntTSL 2 BASIC13.04□□□□□ -0.32
KCNIP4Q6PIL6 HOXA3-202ENST00000396352 3263 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
KCNIP4Q6PIL6 AL603832.2-201ENST00000566195 2125 ntBASIC13.04□□□□□ -0.32
KCNIP4Q6PIL6 MAGEA8-201ENST00000286482 1778 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
KCNIP4Q6PIL6 TOM1L2-203ENST00000395739 1766 ntTSL 2 BASIC13.04□□□□□ -0.32
KCNIP4Q6PIL6 GRB7-205ENST00000445327 2197 ntTSL 2 BASIC13.04□□□□□ -0.32
KCNIP4Q6PIL6 ABHD10-201ENST00000273359 2590 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
KCNIP4Q6PIL6 PDXK-202ENST00000327574 2583 ntTSL 2 BASIC13.04□□□□□ -0.32
KCNIP4Q6PIL6 CDH1-202ENST00000422392 2567 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
KCNIP4Q6PIL6 LYPLAL1-201ENST00000366927 1819 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
KCNIP4Q6PIL6 SETD1A-201ENST00000262519 6451 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
KCNIP4Q6PIL6 DPYSL2-204ENST00000521913 4805 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
KCNIP4Q6PIL6 ETV2-203ENST00000402764 1487 ntAPPRIS P3 TSL 1 (best) BASIC13.04□□□□□ -0.32
KCNIP4Q6PIL6 SRRD-201ENST00000215917 4020 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
KCNIP4Q6PIL6 ARVCF-201ENST00000263207 4041 ntAPPRIS P2 TSL 1 (best) BASIC13.04□□□□□ -0.32
KCNIP4Q6PIL6 TRIM25-201ENST00000316881 5734 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
KCNIP4Q6PIL6 CHRFAM7A-203ENST00000401522 1913 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
KCNIP4Q6PIL6 STAB1-201ENST00000321725 7928 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
KCNIP4Q6PIL6 PLTP-202ENST00000372420 1530 ntTSL 2 BASIC13.03□□□□□ -0.32
KCNIP4Q6PIL6 NCF1B-201ENST00000423083 1516 ntTSL 2 BASIC13.03□□□□□ -0.32
KCNIP4Q6PIL6 PODN-202ENST00000371500 3287 ntAPPRIS ALT2 TSL 1 (best) BASIC13.03□□□□□ -0.32
KCNIP4Q6PIL6 MIEF2-203ENST00000395704 2879 ntTSL 2 BASIC13.03□□□□□ -0.32
KCNIP4Q6PIL6 GOLGA2P7-202ENST00000400817 2850 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
KCNIP4Q6PIL6 SPEG-205ENST00000396698 3379 ntTSL 5 BASIC13.03□□□□□ -0.32
KCNIP4Q6PIL6 PRKD2-216ENST00000601806 2906 ntAPPRIS ALT2 TSL 5 BASIC13.03□□□□□ -0.32
KCNIP4Q6PIL6 DBNDD1-202ENST00000304733 2081 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
Retrieved 100 of 98,524 protein–RNA pairs in 26.6 ms