Protein–RNA interactions for Protein: Q6NVH7

SWSAP1, ATPase SWSAP1, humanhuman

Predictions only

Length 229 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SWSAP1Q6NVH7 CERCAM-201ENST00000372838 2685 ntAPPRIS P3 TSL 1 (best) BASIC18.6■□□□□ 0.57
SWSAP1Q6NVH7 TBX4-201ENST00000240335 2470 ntAPPRIS P3 TSL 1 (best) BASIC18.6■□□□□ 0.57
SWSAP1Q6NVH7 OGFOD2-224ENST00000545612 1465 ntTSL 2 BASIC18.6■□□□□ 0.57
SWSAP1Q6NVH7 LINC00963-208ENST00000454968 1403 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
SWSAP1Q6NVH7 GADD45B-201ENST00000215631 1373 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
SWSAP1Q6NVH7 CGREF1-205ENST00000404694 1376 ntAPPRIS ALT2 TSL 2 BASIC18.6■□□□□ 0.57
SWSAP1Q6NVH7 WDR74-206ENST00000529106 1366 ntAPPRIS P1 TSL 2 BASIC18.6■□□□□ 0.57
SWSAP1Q6NVH7 EHMT1-236ENST00000637161 5049 ntAPPRIS ALT2 TSL 5 BASIC18.6■□□□□ 0.57
SWSAP1Q6NVH7 CAMK2D-201ENST00000296402 5820 ntAPPRIS P3 TSL 5 BASIC18.6■□□□□ 0.57
SWSAP1Q6NVH7 SHANK1-201ENST00000293441 6643 ntAPPRIS P2 TSL 1 (best) BASIC18.6■□□□□ 0.57
SWSAP1Q6NVH7 ZDHHC4-206ENST00000405731 1348 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
SWSAP1Q6NVH7 CORO1A-208ENST00000565497 1348 ntTSL 5 BASIC18.6■□□□□ 0.57
SWSAP1Q6NVH7 USP27X-AS1-201ENST00000437322 2175 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
SWSAP1Q6NVH7 TPM2-201ENST00000329305 1018 ntAPPRIS ALT1 TSL 2 BASIC18.6■□□□□ 0.57
SWSAP1Q6NVH7 LINC01143-201ENST00000449073 625 ntTSL 2 BASIC18.6■□□□□ 0.57
SWSAP1Q6NVH7 KRT18P34-201ENST00000488218 1270 ntBASIC18.6■□□□□ 0.57
SWSAP1Q6NVH7 IGLL5-201ENST00000526893 1050 ntAPPRIS P2 TSL 1 (best) BASIC18.6■□□□□ 0.57
SWSAP1Q6NVH7 FXYD6-209ENST00000530956 579 ntAPPRIS P2 TSL 2 BASIC18.6■□□□□ 0.57
SWSAP1Q6NVH7 IGLL5-202ENST00000531372 882 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
SWSAP1Q6NVH7 AC025678.2-201ENST00000562061 970 ntBASIC18.6■□□□□ 0.57
SWSAP1Q6NVH7 SSH2-211ENST00000590153 570 ntTSL 4 BASIC18.6■□□□□ 0.57
SWSAP1Q6NVH7 AC005759.1-201ENST00000594805 855 ntTSL 3 BASIC18.6■□□□□ 0.57
SWSAP1Q6NVH7 CHGA-201ENST00000216492 2063 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
SWSAP1Q6NVH7 HMCN2-204ENST00000611173 1920 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
SWSAP1Q6NVH7 DYRK1B-205ENST00000597639 1806 ntTSL 5 BASIC18.6■□□□□ 0.57
SWSAP1Q6NVH7 KLC1-202ENST00000334553 2524 ntTSL 5 BASIC18.6■□□□□ 0.57
SWSAP1Q6NVH7 GPX3-210ENST00000622181 1757 ntAPPRIS ALT1 TSL 5 BASIC18.6■□□□□ 0.57
SWSAP1Q6NVH7 PSMD12-202ENST00000357146 2437 ntTSL 2 BASIC18.6■□□□□ 0.57
SWSAP1Q6NVH7 RCC1-202ENST00000373832 2424 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
SWSAP1Q6NVH7 RTN4-204ENST00000357732 2390 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
SWSAP1Q6NVH7 HLA-F-216ENST00000259951 1635 ntAPPRIS P4 BASIC18.6■□□□□ 0.57
SWSAP1Q6NVH7 SETD7-204ENST00000506866 1602 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
SWSAP1Q6NVH7 UBE2O-201ENST00000319380 5436 ntAPPRIS P2 TSL 1 (best) BASIC18.6■□□□□ 0.57
SWSAP1Q6NVH7 CMIP-201ENST00000398040 2825 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
SWSAP1Q6NVH7 PDXDC1-204ENST00000455313 2183 ntTSL 2 BASIC18.59■□□□□ 0.57
SWSAP1Q6NVH7 NIPAL2-201ENST00000341166 4581 ntTSL 2 BASIC18.59■□□□□ 0.57
SWSAP1Q6NVH7 LITAF-202ENST00000381810 1527 ntTSL 5 BASIC18.59■□□□□ 0.57
SWSAP1Q6NVH7 LINC00595-204ENST00000434974 2692 ntTSL 2 BASIC18.59■□□□□ 0.57
SWSAP1Q6NVH7 FHAD1-205ENST00000375997 1459 ntTSL 3 BASIC18.59■□□□□ 0.57
SWSAP1Q6NVH7 AP2A2-222ENST00000534328 1491 ntTSL 5 BASIC18.59■□□□□ 0.57
SWSAP1Q6NVH7 POLR2J4-203ENST00000326391 1422 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
SWSAP1Q6NVH7 TMEM25-202ENST00000354064 1965 ntTSL 2 BASIC18.59■□□□□ 0.57
SWSAP1Q6NVH7 FUT5-201ENST00000252675 1916 ntAPPRIS P1 BASIC18.59■□□□□ 0.57
SWSAP1Q6NVH7 EML3-201ENST00000278845 3017 ntAPPRIS ALT1 TSL 5 BASIC18.59■□□□□ 0.57
SWSAP1Q6NVH7 IRF9-203ENST00000557894 1391 ntTSL 5 BASIC18.59■□□□□ 0.57
SWSAP1Q6NVH7 PLXNB2-214ENST00000614805 1387 ntTSL 5 BASIC18.59■□□□□ 0.57
SWSAP1Q6NVH7 GALNT9-201ENST00000328957 2410 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
SWSAP1Q6NVH7 TINF2-208ENST00000558566 1874 ntAPPRIS ALT2 TSL 2 BASIC18.59■□□□□ 0.57
SWSAP1Q6NVH7 MAP4K2-202ENST00000377350 2931 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
SWSAP1Q6NVH7 SLC18B1-201ENST00000275227 2368 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
SWSAP1Q6NVH7 RNF128-201ENST00000255499 2817 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
SWSAP1Q6NVH7 HNRNPFP1-201ENST00000391730 1133 ntBASIC18.59■□□□□ 0.57
SWSAP1Q6NVH7 MAPK15-202ENST00000395107 834 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
SWSAP1Q6NVH7 GRTP1-AS1-201ENST00000419199 867 ntTSL 5 BASIC18.59■□□□□ 0.57
SWSAP1Q6NVH7 GPS2P2-201ENST00000430745 888 ntBASIC18.59■□□□□ 0.57
SWSAP1Q6NVH7 RBPMS2P1-201ENST00000437762 623 ntBASIC18.59■□□□□ 0.57
SWSAP1Q6NVH7 RPS3A-212ENST00000514682 985 ntTSL 5 BASIC18.59■□□□□ 0.57
SWSAP1Q6NVH7 AL138781.1-202ENST00000563018 775 ntTSL 3 BASIC18.59■□□□□ 0.57
SWSAP1Q6NVH7 AL356481.3-201ENST00000630523 575 ntTSL 5 BASIC18.59■□□□□ 0.57
SWSAP1Q6NVH7 TMED3-203ENST00000536821 2265 ntTSL 2 BASIC18.59■□□□□ 0.57
SWSAP1Q6NVH7 AC105020.1-201ENST00000435356 2205 ntBASIC18.59■□□□□ 0.57
SWSAP1Q6NVH7 TACR2-202ENST00000373307 1740 ntTSL 2 BASIC18.59■□□□□ 0.57
SWSAP1Q6NVH7 SSR4-201ENST00000320857 1671 ntAPPRIS P1 TSL 2 BASIC18.59■□□□□ 0.57
SWSAP1Q6NVH7 GUCD1-203ENST00000404664 1606 ntTSL 2 BASIC18.59■□□□□ 0.57
SWSAP1Q6NVH7 STX17-205ENST00000525640 2523 ntAPPRIS P1 TSL 2 BASIC18.59■□□□□ 0.57
SWSAP1Q6NVH7 SPOP-201ENST00000347630 2965 ntAPPRIS P1 TSL 5 BASIC18.59■□□□□ 0.57
SWSAP1Q6NVH7 STK32C-204ENST00000368622 2010 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
SWSAP1Q6NVH7 SPATC1-201ENST00000377470 2007 ntAPPRIS P3 TSL 1 (best) BASIC18.59■□□□□ 0.57
SWSAP1Q6NVH7 NQO2-201ENST00000338130 1515 ntAPPRIS P1 TSL 2 BASIC18.59■□□□□ 0.57
SWSAP1Q6NVH7 GRAMD1B-214ENST00000635736 2814 ntAPPRIS P1 TSL 5 BASIC18.59■□□□□ 0.57
SWSAP1Q6NVH7 DGKI-203ENST00000446122 4070 ntAPPRIS ALT2 TSL 5 BASIC18.59■□□□□ 0.57
SWSAP1Q6NVH7 PTPN20-203ENST00000374342 1929 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
SWSAP1Q6NVH7 DNAJB2-201ENST00000336576 3176 ntTSL 1 (best) BASIC18.58■□□□□ 0.57
SWSAP1Q6NVH7 BRPF1-203ENST00000424362 4712 ntAPPRIS ALT1 TSL 1 (best) BASIC18.58■□□□□ 0.57
SWSAP1Q6NVH7 APP-202ENST00000348990 3355 ntTSL 1 (best) BASIC18.58■□□□□ 0.57
SWSAP1Q6NVH7 SNHG18-201ENST00000508179 1799 ntTSL 2 BASIC18.58■□□□□ 0.57
SWSAP1Q6NVH7 RHBG-204ENST00000537040 1789 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
SWSAP1Q6NVH7 AP005329.2-201ENST00000580139 1771 ntTSL 2 BASIC18.58■□□□□ 0.57
SWSAP1Q6NVH7 FAM208A-209ENST00000493960 5600 ntAPPRIS P2 TSL 5 BASIC18.58■□□□□ 0.57
SWSAP1Q6NVH7 QRFPR-202ENST00000394427 1708 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
SWSAP1Q6NVH7 MIR346-201ENST00000362234 95 ntBASIC18.58■□□□□ 0.56
SWSAP1Q6NVH7 ITGA9-AS1-201ENST00000366441 895 ntTSL 3 BASIC18.58■□□□□ 0.56
SWSAP1Q6NVH7 CTRC-202ENST00000375949 898 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
SWSAP1Q6NVH7 PTMS-202ENST00000389462 773 ntTSL 2 BASIC18.58■□□□□ 0.56
SWSAP1Q6NVH7 PNMT-202ENST00000394246 821 ntTSL 2 BASIC18.58■□□□□ 0.56
SWSAP1Q6NVH7 IL32-206ENST00000440815 920 ntAPPRIS P4 TSL 2 BASIC18.58■□□□□ 0.56
SWSAP1Q6NVH7 IL32-207ENST00000444393 892 ntAPPRIS P4 TSL 2 BASIC18.58■□□□□ 0.56
SWSAP1Q6NVH7 CYMP-203ENST00000474680 1263 ntBASIC18.58■□□□□ 0.56
SWSAP1Q6NVH7 SWI5-205ENST00000495313 466 ntAPPRIS ALT2 TSL 3 BASIC18.58■□□□□ 0.56
SWSAP1Q6NVH7 AL391335.1-201ENST00000504583 535 ntTSL 4 BASIC18.58■□□□□ 0.56
SWSAP1Q6NVH7 UBE2V2-201ENST00000517630 612 ntTSL 4 BASIC18.58■□□□□ 0.56
SWSAP1Q6NVH7 KBTBD4-203ENST00000525720 980 ntTSL 3 BASIC18.58■□□□□ 0.56
SWSAP1Q6NVH7 IL32-219ENST00000531965 746 ntAPPRIS ALT2 TSL 1 (best) BASIC18.58■□□□□ 0.56
SWSAP1Q6NVH7 SLC25A39P2-201ENST00000537614 270 ntBASIC18.58■□□□□ 0.56
SWSAP1Q6NVH7 IL32-226ENST00000548476 1014 ntAPPRIS ALT2 TSL 2 BASIC18.58■□□□□ 0.56
SWSAP1Q6NVH7 AL133467.1-201ENST00000554161 993 ntTSL 2 BASIC18.58■□□□□ 0.56
SWSAP1Q6NVH7 UBE2Q2L-201ENST00000558195 498 ntAPPRIS P1 TSL 2 BASIC18.58■□□□□ 0.56
SWSAP1Q6NVH7 AC108449.3-201ENST00000560714 585 ntTSL 3 BASIC18.58■□□□□ 0.56
SWSAP1Q6NVH7 AP000842.3-202ENST00000569238 1080 ntBASIC18.58■□□□□ 0.56
SWSAP1Q6NVH7 LSM12-202ENST00000585388 942 ntTSL 3 BASIC18.58■□□□□ 0.56
Retrieved 100 of 98,524 protein–RNA pairs in 32.4 ms