Protein–RNA interactions for Protein: Q68DV7

RNF43, E3 ubiquitin-protein ligase RNF43, humanhuman

Predictions only

Length 783 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF43Q68DV7 SLC9A3-AS1-204ENST00000606288 791 ntTSL 2 BASIC17.61■□□□□ 0.41
RNF43Q68DV7 AC106028.4-201ENST00000614509 607 ntBASIC17.61■□□□□ 0.41
RNF43Q68DV7 PCDHGC4-204ENST00000618371 812 ntTSL 3 BASIC17.61■□□□□ 0.41
RNF43Q68DV7 FRMD6-AS1-201ENST00000617151 2229 ntBASIC17.61■□□□□ 0.41
RNF43Q68DV7 PLEKHJ1-211ENST00000589097 2251 ntAPPRIS P1 TSL 2 BASIC17.61■□□□□ 0.41
RNF43Q68DV7 GMDS-AS1-201ENST00000456943 2308 ntTSL 2 BASIC17.61■□□□□ 0.41
RNF43Q68DV7 UBFD1-201ENST00000395878 5110 ntAPPRIS P2 TSL 2 BASIC17.61■□□□□ 0.41
RNF43Q68DV7 AC016396.2-201ENST00000562575 1417 ntBASIC17.61■□□□□ 0.41
RNF43Q68DV7 GPR158-AS1-201ENST00000449643 2433 ntTSL 2 BASIC17.61■□□□□ 0.41
RNF43Q68DV7 ZNF133-204ENST00000396026 2717 ntAPPRIS P3 TSL 3 BASIC17.61■□□□□ 0.41
RNF43Q68DV7 PFKP-202ENST00000381075 2769 ntTSL 2 BASIC17.61■□□□□ 0.41
RNF43Q68DV7 LGMN-201ENST00000334869 2055 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
RNF43Q68DV7 RUNDC3B-203ENST00000394654 2064 ntAPPRIS P4 TSL 2 BASIC17.6■□□□□ 0.41
RNF43Q68DV7 PACS2-203ENST00000447393 6365 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
RNF43Q68DV7 GNG2-213ENST00000556766 2125 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
RNF43Q68DV7 DIAPH2-205ENST00000373061 4983 ntAPPRIS ALT2 TSL 5 BASIC17.6■□□□□ 0.41
RNF43Q68DV7 GCK-209ENST00000616242 2260 ntTSL 5 BASIC17.6■□□□□ 0.41
RNF43Q68DV7 DNMT3A-205ENST00000402667 2300 ntAPPRIS ALT1 TSL 5 BASIC17.6■□□□□ 0.41
RNF43Q68DV7 SARDH-205ENST00000422262 2367 ntTSL 5 BASIC17.6■□□□□ 0.41
RNF43Q68DV7 GATA3-201ENST00000346208 2654 ntAPPRIS P3 TSL 1 (best) BASIC17.6■□□□□ 0.41
RNF43Q68DV7 PCIF1-201ENST00000372409 2747 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
RNF43Q68DV7 LINC02199-201ENST00000506655 2702 ntBASIC17.6■□□□□ 0.41
RNF43Q68DV7 SSPN-201ENST00000242729 2788 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
RNF43Q68DV7 NUAK1-201ENST00000261402 6828 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
RNF43Q68DV7 TMEM205-201ENST00000354882 1034 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
RNF43Q68DV7 THAP7-202ENST00000399133 1144 ntAPPRIS P1 TSL 2 BASIC17.6■□□□□ 0.41
RNF43Q68DV7 AL035633.1-201ENST00000406139 838 ntBASIC17.6■□□□□ 0.41
RNF43Q68DV7 XXYLT1-204ENST00000429994 865 ntTSL 3 BASIC17.6■□□□□ 0.41
RNF43Q68DV7 BARX1-AS1-202ENST00000454594 307 ntTSL 3 BASIC17.6■□□□□ 0.41
RNF43Q68DV7 TIMM17B-208ENST00000495490 939 ntTSL 5 BASIC17.6■□□□□ 0.41
RNF43Q68DV7 AC092384.3-201ENST00000561980 531 ntTSL 4 BASIC17.6■□□□□ 0.41
RNF43Q68DV7 LINC00668-203ENST00000579012 605 ntTSL 3 BASIC17.6■□□□□ 0.41
RNF43Q68DV7 METTL23-202ENST00000586200 465 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
RNF43Q68DV7 TMEM205-205ENST00000586590 677 ntAPPRIS P1 TSL 5 BASIC17.6■□□□□ 0.41
RNF43Q68DV7 TMEM205-207ENST00000586956 1003 ntAPPRIS P1 TSL 2 BASIC17.6■□□□□ 0.41
RNF43Q68DV7 AC005306.1-201ENST00000587498 661 ntTSL 3 BASIC17.6■□□□□ 0.41
RNF43Q68DV7 METTL23-212ENST00000590964 1006 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
RNF43Q68DV7 TRIM29-221ENST00000627238 510 ntTSL 5 BASIC17.6■□□□□ 0.41
RNF43Q68DV7 SERHL2-203ENST00000340239 1315 ntTSL 5 BASIC17.6■□□□□ 0.41
RNF43Q68DV7 PI4KAP1-204ENST00000612579 1703 ntBASIC17.6■□□□□ 0.41
RNF43Q68DV7 IL34-202ENST00000429149 1779 ntAPPRIS P2 TSL 5 BASIC17.6■□□□□ 0.41
RNF43Q68DV7 RABEP1-202ENST00000537505 5365 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
RNF43Q68DV7 C11orf49-204ENST00000395460 1916 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
RNF43Q68DV7 TMUB2-212ENST00000589785 1918 ntAPPRIS P3 TSL 2 BASIC17.6■□□□□ 0.41
RNF43Q68DV7 HCRTR1-203ENST00000403528 2003 ntAPPRIS P1 TSL 5 BASIC17.6■□□□□ 0.41
RNF43Q68DV7 C17orf62-201ENST00000306645 2093 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
RNF43Q68DV7 NUP50-203ENST00000407019 2059 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
RNF43Q68DV7 LGMN-202ENST00000393218 2115 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
RNF43Q68DV7 PTPN5-202ENST00000396166 2299 ntTSL 2 BASIC17.6■□□□□ 0.41
RNF43Q68DV7 ARL14EP-201ENST00000282032 2430 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
RNF43Q68DV7 CSNK1A1L-201ENST00000379800 2406 ntAPPRIS P1 BASIC17.6■□□□□ 0.41
RNF43Q68DV7 PLPPR2-201ENST00000251473 2727 ntAPPRIS P3 TSL 1 (best) BASIC17.6■□□□□ 0.41
RNF43Q68DV7 SFT2D3-201ENST00000310981 3735 ntAPPRIS P1 BASIC17.6■□□□□ 0.41
RNF43Q68DV7 MYO1B-202ENST00000339514 5026 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
RNF43Q68DV7 KDSR-202ENST00000406396 5447 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
RNF43Q68DV7 PKD1P1-201ENST00000458669 6805 ntBASIC17.6■□□□□ 0.41
RNF43Q68DV7 PLEKHM2-201ENST00000375793 4004 ntAPPRIS ALT2 TSL 5 BASIC17.59■□□□□ 0.41
RNF43Q68DV7 DGKZ-201ENST00000318201 3213 ntTSL 2 BASIC17.59■□□□□ 0.41
RNF43Q68DV7 PIGQ-201ENST00000026218 2846 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
RNF43Q68DV7 CSF1-204ENST00000369802 2484 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
RNF43Q68DV7 RPN1-201ENST00000296255 2314 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
RNF43Q68DV7 TSPAN7-202ENST00000378482 1909 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
RNF43Q68DV7 SEMA3C-201ENST00000265361 5174 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
RNF43Q68DV7 BRD2-201ENST00000374825 4894 ntAPPRIS P3 TSL 1 (best) BASIC17.59■□□□□ 0.41
RNF43Q68DV7 ADCY1-204ENST00000621543 1647 ntTSL 5 BASIC17.59■□□□□ 0.41
RNF43Q68DV7 OTUD5-204ENST00000428668 1493 ntTSL 2 BASIC17.59■□□□□ 0.41
RNF43Q68DV7 NDUFV1-223ENST00000532303 1493 ntTSL 2 BASIC17.59■□□□□ 0.41
RNF43Q68DV7 MBL1P-201ENST00000480805 1424 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
RNF43Q68DV7 AC002310.6-201ENST00000624451 1377 ntBASIC17.59■□□□□ 0.41
RNF43Q68DV7 PTPRC-206ENST00000413409 1338 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
RNF43Q68DV7 CIB3-201ENST00000269878 711 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
RNF43Q68DV7 SFTPC-201ENST00000318561 997 ntAPPRIS P3 TSL 1 (best) BASIC17.59■□□□□ 0.41
RNF43Q68DV7 HIST1H2BD-202ENST00000377777 496 ntAPPRIS P1 BASIC17.59■□□□□ 0.41
RNF43Q68DV7 SELENOM-201ENST00000400299 694 ntAPPRIS P2 TSL 1 (best) BASIC17.59■□□□□ 0.41
RNF43Q68DV7 ALG1L5P-201ENST00000482043 771 ntBASIC17.59■□□□□ 0.41
RNF43Q68DV7 ZIC4-214ENST00000491672 925 ntTSL 4 BASIC17.59■□□□□ 0.41
RNF43Q68DV7 SLC25A6P2-201ENST00000497974 877 ntBASIC17.59■□□□□ 0.41
RNF43Q68DV7 HOXD8-204ENST00000544999 1235 ntAPPRIS ALT2 TSL 5 BASIC17.59■□□□□ 0.41
RNF43Q68DV7 AC069503.2-201ENST00000546333 576 ntAPPRIS P1 TSL 5 BASIC17.59■□□□□ 0.41
RNF43Q68DV7 OR5AH1P-202ENST00000597822 431 ntTSL 3 BASIC17.59■□□□□ 0.41
RNF43Q68DV7 AC010507.1-202ENST00000633286 381 ntTSL 3 BASIC17.59■□□□□ 0.41
RNF43Q68DV7 AC010507.1-201ENST00000633895 436 ntBASIC17.59■□□□□ 0.41
RNF43Q68DV7 SLC39A8-201ENST00000356736 3144 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
RNF43Q68DV7 AGK-211ENST00000629555 2765 ntTSL 5 BASIC17.59■□□□□ 0.41
RNF43Q68DV7 SLC6A2-209ENST00000568943 2471 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
RNF43Q68DV7 ARL4C-202ENST00000390645 4013 ntAPPRIS P1 BASIC17.59■□□□□ 0.41
RNF43Q68DV7 PCDHGC3-205ENST00000617641 2346 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
RNF43Q68DV7 PFN2-201ENST00000239940 2261 ntAPPRIS P3 TSL 1 (best) BASIC17.59■□□□□ 0.41
RNF43Q68DV7 MTA2-204ENST00000527204 2265 ntTSL 2 BASIC17.59■□□□□ 0.41
RNF43Q68DV7 ACSF3-204ENST00000406948 2247 ntAPPRIS P1 TSL 2 BASIC17.59■□□□□ 0.41
RNF43Q68DV7 NSFL1C-201ENST00000216879 3568 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
RNF43Q68DV7 LCK-202ENST00000336890 2117 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
RNF43Q68DV7 TTC24-201ENST00000368236 2005 ntAPPRIS P1 TSL 5 BASIC17.59■□□□□ 0.41
RNF43Q68DV7 MOCS1-206ENST00000425303 1920 ntTSL 2 BASIC17.59■□□□□ 0.41
RNF43Q68DV7 MBOAT1-201ENST00000324607 1794 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
RNF43Q68DV7 MYO1B-204ENST00000392318 5082 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
RNF43Q68DV7 NKIRAS1-202ENST00000412028 1605 ntAPPRIS ALT1 TSL 5 BASIC17.58■□□□□ 0.41
RNF43Q68DV7 ATP6V0E2-202ENST00000425642 1649 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
RNF43Q68DV7 CPEB2-AS1-201ENST00000500394 1630 ntTSL 1 (best) BASIC17.58■□□□□ 0.41
RNF43Q68DV7 SRSF12-201ENST00000452027 3599 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
Retrieved 100 of 98,524 protein–RNA pairs in 33.4 ms