Protein–RNA interactions for Protein: Q5VSP4

LCN1P1, Putative lipocalin 1-like protein 1, humanhuman

Predictions only

Length 162 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LCN1P1Q5VSP4 AC126755.2-202ENST00000427999 1547 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
LCN1P1Q5VSP4 MFF-201ENST00000304593 2004 ntAPPRIS P1 TSL 2 BASIC15.25■□□□□ 0.03
LCN1P1Q5VSP4 ACTG1-208ENST00000575087 2001 ntAPPRIS P1 TSL 5 BASIC15.25■□□□□ 0.03
LCN1P1Q5VSP4 ST14-201ENST00000278742 3539 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
LCN1P1Q5VSP4 TAP2-202ENST00000374899 2497 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
LCN1P1Q5VSP4 TBX5-203ENST00000405440 2203 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
LCN1P1Q5VSP4 BID-213ENST00000615414 2236 ntTSL 5 BASIC15.25■□□□□ 0.03
LCN1P1Q5VSP4 PSD4-201ENST00000245796 5188 ntAPPRIS P2 TSL 1 (best) BASIC15.25■□□□□ 0.03
LCN1P1Q5VSP4 AC136759.1-201ENST00000534201 2163 ntTSL 2 BASIC15.25■□□□□ 0.03
LCN1P1Q5VSP4 CCDC90B-203ENST00000525503 1919 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
LCN1P1Q5VSP4 KCTD14-201ENST00000353172 1691 ntAPPRIS P3 TSL 1 (best) BASIC15.25■□□□□ 0.03
LCN1P1Q5VSP4 TRIM60-203ENST00000508504 1674 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
LCN1P1Q5VSP4 RECQL4-209ENST00000617875 3809 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
LCN1P1Q5VSP4 LONRF1-201ENST00000398246 3594 ntAPPRIS P1 TSL 5 BASIC15.25■□□□□ 0.03
LCN1P1Q5VSP4 LILRB5-202ENST00000345866 1864 ntTSL 2 BASIC15.25■□□□□ 0.03
LCN1P1Q5VSP4 GPBAR1-201ENST00000479077 1869 ntAPPRIS P1 TSL 2 BASIC15.25■□□□□ 0.03
LCN1P1Q5VSP4 NKX3-1-201ENST00000380871 3271 ntAPPRIS P3 TSL 1 (best) BASIC15.25■□□□□ 0.03
LCN1P1Q5VSP4 TPD52L2-204ENST00000351424 2302 ntAPPRIS P4 TSL 2 BASIC15.25■□□□□ 0.03
LCN1P1Q5VSP4 TSSC2-204ENST00000529482 2337 ntTSL 2 BASIC15.25■□□□□ 0.03
LCN1P1Q5VSP4 AC068944.1-201ENST00000514855 1604 ntTSL 2 BASIC15.25■□□□□ 0.03
LCN1P1Q5VSP4 CALU-205ENST00000535011 3210 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
LCN1P1Q5VSP4 AL021920.2-201ENST00000624828 1351 ntBASIC15.24■□□□□ 0.03
LCN1P1Q5VSP4 CES4A-206ENST00000540579 1825 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
LCN1P1Q5VSP4 TRMT2A-202ENST00000403707 2928 ntAPPRIS P3 TSL 1 (best) BASIC15.24■□□□□ 0.03
LCN1P1Q5VSP4 CLN6-202ENST00000538696 1343 ntTSL 2 BASIC15.24■□□□□ 0.03
LCN1P1Q5VSP4 SIN3B-201ENST00000248054 5037 ntAPPRIS ALT2 TSL 1 (best) BASIC15.24■□□□□ 0.03
LCN1P1Q5VSP4 SLC43A2-204ENST00000571650 3261 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
LCN1P1Q5VSP4 MYOG-201ENST00000241651 1528 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
LCN1P1Q5VSP4 CLDN7-201ENST00000360325 1542 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
LCN1P1Q5VSP4 MX1-210ENST00000455164 2810 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
LCN1P1Q5VSP4 TMTC4-203ENST00000376234 3483 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
LCN1P1Q5VSP4 FAF1-202ENST00000396153 6817 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
LCN1P1Q5VSP4 PTCRA-201ENST00000304672 1080 ntAPPRIS P3 TSL 1 (best) BASIC15.24■□□□□ 0.03
LCN1P1Q5VSP4 HRAS-201ENST00000311189 894 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
LCN1P1Q5VSP4 DDRGK1-202ENST00000380201 1128 ntTSL 2 BASIC15.24■□□□□ 0.03
LCN1P1Q5VSP4 LINC00487-201ENST00000382045 2131 ntTSL 2 BASIC15.24■□□□□ 0.03
LCN1P1Q5VSP4 MIEN1-201ENST00000394231 1006 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
LCN1P1Q5VSP4 PLPP5-202ENST00000422581 853 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
LCN1P1Q5VSP4 AC004540.1-201ENST00000439120 891 ntTSL 2 BASIC15.24■□□□□ 0.03
LCN1P1Q5VSP4 PTCRA-202ENST00000441198 1005 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
LCN1P1Q5VSP4 PTCRA-203ENST00000446507 759 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
LCN1P1Q5VSP4 LINC01128-207ENST00000449005 874 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
LCN1P1Q5VSP4 ST20-202ENST00000485386 529 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
LCN1P1Q5VSP4 LCN10-205ENST00000497771 723 ntAPPRIS P2 TSL 1 (best) BASIC15.24■□□□□ 0.03
LCN1P1Q5VSP4 AC079848.1-202ENST00000507924 444 ntTSL 3 BASIC15.24■□□□□ 0.03
LCN1P1Q5VSP4 ABR-204ENST00000543210 1049 ntTSL 2 BASIC15.24■□□□□ 0.03
LCN1P1Q5VSP4 JPH4-203ENST00000544177 1124 ntTSL 2 BASIC15.24■□□□□ 0.03
LCN1P1Q5VSP4 AC104640.1-201ENST00000562617 2109 ntBASIC15.24■□□□□ 0.03
LCN1P1Q5VSP4 ABR-217ENST00000572441 563 ntTSL 4 BASIC15.24■□□□□ 0.03
LCN1P1Q5VSP4 FUT6-212ENST00000592563 1095 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
LCN1P1Q5VSP4 LAPTM4B-201ENST00000445593 3173 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
LCN1P1Q5VSP4 PCDHA4-203ENST00000530339 5251 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
LCN1P1Q5VSP4 SURF6-201ENST00000372022 4447 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
LCN1P1Q5VSP4 ARSE-206ENST00000545496 2506 ntTSL 2 BASIC15.24■□□□□ 0.03
LCN1P1Q5VSP4 ITPK1-201ENST00000267615 6066 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
LCN1P1Q5VSP4 APPL1-201ENST00000288266 6058 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
LCN1P1Q5VSP4 BVES-202ENST00000336775 1663 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
LCN1P1Q5VSP4 EPS8L2-201ENST00000318562 3148 ntAPPRIS P2 TSL 1 (best) BASIC15.24■□□□□ 0.03
LCN1P1Q5VSP4 BRF1-201ENST00000327359 2292 ntTSL 2 BASIC15.24■□□□□ 0.03
LCN1P1Q5VSP4 MOV10L1-203ENST00000395852 1422 ntTSL 2 BASIC15.24■□□□□ 0.03
LCN1P1Q5VSP4 CRB3-203ENST00000598494 1443 ntAPPRIS ALT2 TSL 2 BASIC15.24■□□□□ 0.03
LCN1P1Q5VSP4 TVP23B-202ENST00000476139 2989 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
LCN1P1Q5VSP4 ABTB1-202ENST00000453791 1961 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
LCN1P1Q5VSP4 RGS19-202ENST00000395042 1593 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
LCN1P1Q5VSP4 TFAP2A-AS1-201ENST00000420777 1575 ntTSL 5 BASIC15.24■□□□□ 0.03
LCN1P1Q5VSP4 TNFRSF10A-201ENST00000221132 2714 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
LCN1P1Q5VSP4 STEAP3-204ENST00000409811 2103 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
LCN1P1Q5VSP4 APBB1-224ENST00000621678 1907 ntTSL 5 BASIC15.23■□□□□ 0.03
LCN1P1Q5VSP4 CACNB3-201ENST00000301050 2696 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
LCN1P1Q5VSP4 DIO3OS-208ENST00000556120 2473 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
LCN1P1Q5VSP4 AC007728.2-201ENST00000563315 2296 ntTSL 5 BASIC15.23■□□□□ 0.03
LCN1P1Q5VSP4 RBM47-212ENST00000514014 2419 ntTSL 2 BASIC15.23■□□□□ 0.03
LCN1P1Q5VSP4 CALHM3-201ENST00000369783 1652 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
LCN1P1Q5VSP4 CELF6-204ENST00000543764 1676 ntTSL 2 BASIC15.23■□□□□ 0.03
LCN1P1Q5VSP4 APOA4-201ENST00000357780 1473 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
LCN1P1Q5VSP4 TBC1D25-201ENST00000376771 4042 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
LCN1P1Q5VSP4 GPS1-226ENST00000623691 1839 ntAPPRIS ALT1 TSL 5 BASIC15.23■□□□□ 0.03
LCN1P1Q5VSP4 AGTRAP-201ENST00000314340 1107 ntAPPRIS P3 TSL 1 (best) BASIC15.23■□□□□ 0.03
LCN1P1Q5VSP4 FAM239B-201ENST00000381106 1099 ntTSL 2 BASIC15.23■□□□□ 0.03
LCN1P1Q5VSP4 AL096828.1-201ENST00000423020 542 ntTSL 4 BASIC15.23■□□□□ 0.03
LCN1P1Q5VSP4 ACTG1P4-201ENST00000425123 1122 ntBASIC15.23■□□□□ 0.03
LCN1P1Q5VSP4 SIGLEC30P-201ENST00000455569 941 ntBASIC15.23■□□□□ 0.03
LCN1P1Q5VSP4 RNASEH2C-202ENST00000527610 835 ntTSL 2 BASIC15.23■□□□□ 0.03
LCN1P1Q5VSP4 AC015712.1-203ENST00000559331 593 ntTSL 3 BASIC15.23■□□□□ 0.03
LCN1P1Q5VSP4 TNFRSF13B-206ENST00000583789 859 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
LCN1P1Q5VSP4 ANKRD23-203ENST00000418232 2156 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
LCN1P1Q5VSP4 CKAP4-201ENST00000378026 3093 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
LCN1P1Q5VSP4 CDC25C-207ENST00000513970 1968 ntAPPRIS P1 TSL 2 BASIC15.23■□□□□ 0.03
LCN1P1Q5VSP4 CFC1B-203ENST00000620207 1444 ntTSL 5 BASIC15.23■□□□□ 0.03
LCN1P1Q5VSP4 CFC1-203ENST00000621673 1444 ntTSL 2 BASIC15.23■□□□□ 0.03
LCN1P1Q5VSP4 ABCB6-201ENST00000265316 3016 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
LCN1P1Q5VSP4 NSUN5P2-201ENST00000388955 1789 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
LCN1P1Q5VSP4 DDOST-202ENST00000415136 2126 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
LCN1P1Q5VSP4 CHMP1A-201ENST00000397901 2483 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
LCN1P1Q5VSP4 MIER1-205ENST00000371014 1728 ntTSL 2 BASIC15.23■□□□□ 0.03
LCN1P1Q5VSP4 CORO6-202ENST00000388767 2397 ntAPPRIS P2 TSL 2 BASIC15.22■□□□□ 0.03
LCN1P1Q5VSP4 GHDC-207ENST00000587427 2396 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
LCN1P1Q5VSP4 KLHL36-204ENST00000564996 2173 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
LCN1P1Q5VSP4 ZC3H12A-201ENST00000373087 2684 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
LCN1P1Q5VSP4 PIGW-204ENST00000614443 2312 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Retrieved 100 of 98,524 protein–RNA pairs in 25.7 ms