Protein–RNA interactions for Protein: Q4VXA5

KHDC1, KH homology domain-containing protein 1, humanhuman

Known RBP Predictions only

Length 237 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KHDC1Q4VXA5 CDKN2AIP-203ENST00000504169 2721 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
KHDC1Q4VXA5 HSPA8-224ENST00000534624 2463 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
KHDC1Q4VXA5 CCDC59-201ENST00000256151 1983 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
KHDC1Q4VXA5 CLCNKA-203ENST00000439316 1997 ntTSL 2 BASIC17.03■□□□□ 0.32
KHDC1Q4VXA5 HINT1-201ENST00000304043 1081 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
KHDC1Q4VXA5 TBC1D7-202ENST00000356436 1116 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
KHDC1Q4VXA5 TBC1D7-204ENST00000379300 1276 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
KHDC1Q4VXA5 PTCHD3P3-201ENST00000403073 906 ntBASIC17.03■□□□□ 0.32
KHDC1Q4VXA5 DHRS12-203ENST00000444610 1162 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
KHDC1Q4VXA5 AC093909.1-201ENST00000504731 1122 ntBASIC17.03■□□□□ 0.32
KHDC1Q4VXA5 AC136632.2-201ENST00000512891 861 ntBASIC17.03■□□□□ 0.32
KHDC1Q4VXA5 AL121820.2-201ENST00000556301 279 ntTSL 2 BASIC17.03■□□□□ 0.32
KHDC1Q4VXA5 HEXA-210ENST00000567213 1000 ntTSL 3 BASIC17.03■□□□□ 0.32
KHDC1Q4VXA5 WDR88-203ENST00000592765 651 ntTSL 5 BASIC17.03■□□□□ 0.32
KHDC1Q4VXA5 AC120114.3-201ENST00000611923 658 ntBASIC17.03■□□□□ 0.32
KHDC1Q4VXA5 ASB10-202ENST00000377867 1738 ntTSL 2 BASIC17.03■□□□□ 0.32
KHDC1Q4VXA5 TFAP2D-201ENST00000008391 1711 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
KHDC1Q4VXA5 ELP5-202ENST00000356683 2197 ntTSL 5 BASIC17.03■□□□□ 0.32
KHDC1Q4VXA5 AHRR-203ENST00000505113 2173 ntAPPRIS ALT2 TSL 1 (best) BASIC17.03■□□□□ 0.32
KHDC1Q4VXA5 PDPK2P-201ENST00000382326 2387 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
KHDC1Q4VXA5 RHOT1-203ENST00000358365 3297 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
KHDC1Q4VXA5 ABLIM2-201ENST00000341937 2589 ntAPPRIS ALT2 TSL 1 (best) BASIC17.03■□□□□ 0.32
KHDC1Q4VXA5 PSMD2-201ENST00000310118 3449 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
KHDC1Q4VXA5 IKBIP-201ENST00000299157 3189 ntAPPRIS P4 TSL 1 (best) BASIC17.03■□□□□ 0.32
KHDC1Q4VXA5 LRCH2-201ENST00000317135 4929 ntAPPRIS P3 TSL 1 (best) BASIC17.03■□□□□ 0.32
KHDC1Q4VXA5 KDM6A-213ENST00000611820 5924 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
KHDC1Q4VXA5 THAP8-201ENST00000292894 1825 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
KHDC1Q4VXA5 SCARB1-202ENST00000339570 3329 ntTSL 5 BASIC17.03■□□□□ 0.32
KHDC1Q4VXA5 TNFRSF13B-201ENST00000261652 1357 ntAPPRIS P2 TSL 1 (best) BASIC17.02■□□□□ 0.32
KHDC1Q4VXA5 THAP3-201ENST00000054650 1366 ntAPPRIS ALT2 TSL 1 (best) BASIC17.02■□□□□ 0.32
KHDC1Q4VXA5 OPRK1-205ENST00000612786 5196 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
KHDC1Q4VXA5 TUBB-206ENST00000330914 2632 ntTSL 2 BASIC17.02■□□□□ 0.32
KHDC1Q4VXA5 CDH15-201ENST00000289746 2847 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
KHDC1Q4VXA5 EGLN2-207ENST00000593726 2821 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
KHDC1Q4VXA5 UGT8-201ENST00000310836 4084 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
KHDC1Q4VXA5 ANHX-201ENST00000419717 1765 ntAPPRIS P1 TSL 2 BASIC17.02■□□□□ 0.32
KHDC1Q4VXA5 CDKN1A-201ENST00000244741 2180 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
KHDC1Q4VXA5 MBD4-206ENST00000507208 2194 ntAPPRIS ALT2 TSL 2 BASIC17.02■□□□□ 0.32
KHDC1Q4VXA5 ATXN2-219ENST00000550104 4648 ntAPPRIS P3 TSL 1 (best) BASIC17.02■□□□□ 0.32
KHDC1Q4VXA5 CLN6-202ENST00000538696 1343 ntTSL 2 BASIC17.02■□□□□ 0.32
KHDC1Q4VXA5 AC092143.3-201ENST00000565150 1900 ntTSL 5 BASIC17.02■□□□□ 0.32
KHDC1Q4VXA5 TM9SF1-201ENST00000261789 2452 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
KHDC1Q4VXA5 DLGAP1-220ENST00000581699 2258 ntTSL 2 BASIC17.02■□□□□ 0.32
KHDC1Q4VXA5 KDM5C-204ENST00000375401 6031 ntAPPRIS P3 TSL 1 (best) BASIC17.02■□□□□ 0.32
KHDC1Q4VXA5 GPR89P-201ENST00000407924 1495 ntBASIC17.02■□□□□ 0.32
KHDC1Q4VXA5 NDUFV1-223ENST00000532303 1493 ntTSL 2 BASIC17.02■□□□□ 0.32
KHDC1Q4VXA5 GUK1-202ENST00000366716 940 ntAPPRIS P3 TSL 1 (best) BASIC17.02■□□□□ 0.32
KHDC1Q4VXA5 LYPLA2-204ENST00000374505 907 ntTSL 3 BASIC17.02■□□□□ 0.32
KHDC1Q4VXA5 OTOS-202ENST00000391989 645 ntAPPRIS P1 TSL 3 BASIC17.02■□□□□ 0.32
KHDC1Q4VXA5 AL031587.1-201ENST00000410099 1055 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
KHDC1Q4VXA5 TRMT112-203ENST00000535750 823 ntTSL 2 BASIC17.02■□□□□ 0.32
KHDC1Q4VXA5 CHMP1A-208ENST00000550102 803 ntTSL 5 BASIC17.02■□□□□ 0.32
KHDC1Q4VXA5 AL049869.3-201ENST00000554918 558 ntTSL 3 BASIC17.02■□□□□ 0.32
KHDC1Q4VXA5 PDCD2L-203ENST00000587065 492 ntTSL 3 BASIC17.02■□□□□ 0.32
KHDC1Q4VXA5 BX640515.1-201ENST00000617215 977 ntBASIC17.02■□□□□ 0.32
KHDC1Q4VXA5 NME4-212ENST00000621774 904 ntTSL 3 BASIC17.02■□□□□ 0.32
KHDC1Q4VXA5 BAZ1A-203ENST00000382422 5775 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
KHDC1Q4VXA5 YARS-201ENST00000373477 3238 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
KHDC1Q4VXA5 AL513523.2-202ENST00000427283 2040 ntBASIC17.02■□□□□ 0.32
KHDC1Q4VXA5 ICAM3-205ENST00000589261 2024 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
KHDC1Q4VXA5 TMTC2-201ENST00000321196 5681 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
KHDC1Q4VXA5 SPRED2-206ENST00000443619 1800 ntAPPRIS P1 TSL 2 BASIC17.02■□□□□ 0.31
KHDC1Q4VXA5 IFT140-201ENST00000361339 2987 ntTSL 1 (best) BASIC17.02■□□□□ 0.31
KHDC1Q4VXA5 CRAT-201ENST00000318080 2763 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
KHDC1Q4VXA5 LMCD1-204ENST00000426878 1431 ntTSL 2 BASIC17.02■□□□□ 0.31
KHDC1Q4VXA5 ZNF232-201ENST00000250076 2179 ntAPPRIS P3 TSL 5 BASIC17.02■□□□□ 0.31
KHDC1Q4VXA5 NUCB1-202ENST00000407032 2158 ntAPPRIS P2 TSL 5 BASIC17.02■□□□□ 0.31
KHDC1Q4VXA5 NKX3-1-201ENST00000380871 3271 ntAPPRIS P3 TSL 1 (best) BASIC17.02■□□□□ 0.31
KHDC1Q4VXA5 PCDHA8-202ENST00000531613 5260 ntAPPRIS P2 TSL 1 (best) BASIC17.02■□□□□ 0.31
KHDC1Q4VXA5 CALU-205ENST00000535011 3210 ntTSL 1 (best) BASIC17.02■□□□□ 0.31
KHDC1Q4VXA5 SELENBP1-204ENST00000426705 1928 ntTSL 2 BASIC17.02■□□□□ 0.31
KHDC1Q4VXA5 ANKIB1-201ENST00000265742 6081 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
KHDC1Q4VXA5 RABGGTA-201ENST00000216840 2088 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
KHDC1Q4VXA5 PTPRO-209ENST00000543886 2070 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
KHDC1Q4VXA5 EPB41L4A-AS1-201ENST00000413221 2969 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
KHDC1Q4VXA5 ITM2C-201ENST00000326407 1888 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
KHDC1Q4VXA5 FIP1L1-207ENST00000507922 1335 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
KHDC1Q4VXA5 BICD1-205ENST00000550207 1328 ntTSL 3 BASIC17.01■□□□□ 0.31
KHDC1Q4VXA5 PUF60-201ENST00000313352 1804 ntAPPRIS ALT1 TSL 1 (best) BASIC17.01■□□□□ 0.31
KHDC1Q4VXA5 GPR137-212ENST00000539851 1843 ntTSL 2 BASIC17.01■□□□□ 0.31
KHDC1Q4VXA5 ILDR1-203ENST00000393631 1456 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
KHDC1Q4VXA5 PAX6-203ENST00000379109 3182 ntAPPRIS ALT1 TSL 2 BASIC17.01■□□□□ 0.31
KHDC1Q4VXA5 TEF-201ENST00000266304 4394 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
KHDC1Q4VXA5 RALGPS1-203ENST00000373434 2466 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
KHDC1Q4VXA5 PIH1D1-201ENST00000262265 1192 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
KHDC1Q4VXA5 NTMT1-205ENST00000459968 1123 ntTSL 2 BASIC17.01■□□□□ 0.31
KHDC1Q4VXA5 NTMT1-207ENST00000482347 1072 ntTSL 2 BASIC17.01■□□□□ 0.31
KHDC1Q4VXA5 RPS15P9-201ENST00000494093 319 ntBASIC17.01■□□□□ 0.31
KHDC1Q4VXA5 RPL18-208ENST00000549920 1004 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
KHDC1Q4VXA5 RPL18-209ENST00000550645 463 ntTSL 5 BASIC17.01■□□□□ 0.31
KHDC1Q4VXA5 RPL18-214ENST00000552588 559 ntTSL 3 BASIC17.01■□□□□ 0.31
KHDC1Q4VXA5 SLC26A1-205ENST00000622731 1057 ntTSL 5 BASIC17.01■□□□□ 0.31
KHDC1Q4VXA5 DFFA-201ENST00000377036 1403 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
KHDC1Q4VXA5 DMKN-209ENST00000429837 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC17.01■□□□□ 0.31
KHDC1Q4VXA5 LINC00942-201ENST00000515614 2417 ntTSL 5 BASIC17.01■□□□□ 0.31
KHDC1Q4VXA5 ADARB1-204ENST00000389863 3563 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
KHDC1Q4VXA5 PCDHA7-202ENST00000525929 5221 ntAPPRIS P2 TSL 1 (best) BASIC17.01■□□□□ 0.31
KHDC1Q4VXA5 PHYH-202ENST00000396913 1732 ntTSL 5 BASIC17.01■□□□□ 0.31
KHDC1Q4VXA5 CACNA1A-227ENST00000636549 6792 ntAPPRIS ALT2 TSL 5 BASIC17.01■□□□□ 0.31
KHDC1Q4VXA5 SUZ12-201ENST00000322652 4491 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Retrieved 100 of 98,524 protein–RNA pairs in 31.4 ms