Protein–RNA interactions for Protein: Q2M243

CCDC27, Coiled-coil domain-containing protein 27, humanhuman

Predictions only

Length 656 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC27Q2M243 CITED2-204ENST00000618718 901 ntTSL 2 BASIC21.73■■□□□ 1.07
CCDC27Q2M243 ELAC2-203ENST00000426905 2671 ntTSL 2 BASIC21.73■■□□□ 1.07
CCDC27Q2M243 LYPD5-203ENST00000594013 1519 ntAPPRIS P3 TSL 2 BASIC21.73■■□□□ 1.07
CCDC27Q2M243 C2CD3-213ENST00000539061 2722 ntTSL 2 BASIC21.73■■□□□ 1.07
CCDC27Q2M243 PHF1-202ENST00000374516 2330 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
CCDC27Q2M243 MAGEF1-201ENST00000317897 1636 ntAPPRIS P1 BASIC21.73■■□□□ 1.07
CCDC27Q2M243 ARHGEF28-203ENST00000426542 6118 ntAPPRIS ALT2 TSL 1 (best) BASIC21.73■■□□□ 1.07
CCDC27Q2M243 SIRT6-214ENST00000601488 1361 ntTSL 3 BASIC21.73■■□□□ 1.07
CCDC27Q2M243 SLC3A2-203ENST00000377890 2161 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
CCDC27Q2M243 WASH6P-202ENST00000359512 1437 ntBASIC21.72■■□□□ 1.07
CCDC27Q2M243 NKAIN4-202ENST00000370313 1421 ntTSL 3 BASIC21.72■■□□□ 1.07
CCDC27Q2M243 EIF5-201ENST00000216554 5945 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
CCDC27Q2M243 UCKL1-203ENST00000369908 1954 ntAPPRIS P1 TSL 2 BASIC21.72■■□□□ 1.07
CCDC27Q2M243 ARNTL-201ENST00000389707 2776 ntAPPRIS P3 TSL 1 (best) BASIC21.72■■□□□ 1.07
CCDC27Q2M243 MIB2-232ENST00000520777 3321 ntAPPRIS ALT2 TSL 1 (best) BASIC21.72■■□□□ 1.07
CCDC27Q2M243 SLC39A13-201ENST00000354884 2289 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
CCDC27Q2M243 SNAP91-201ENST00000195649 4434 ntAPPRIS ALT2 TSL 5 BASIC21.72■■□□□ 1.07
CCDC27Q2M243 SNAP91-204ENST00000369694 4449 ntAPPRIS P2 TSL 5 BASIC21.72■■□□□ 1.07
CCDC27Q2M243 ACTR3-208ENST00000535589 1530 ntTSL 2 BASIC21.72■■□□□ 1.07
CCDC27Q2M243 ROMO1-201ENST00000336695 496 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
CCDC27Q2M243 SMN1-201ENST00000351205 900 ntAPPRIS P3 TSL 1 (best) BASIC21.72■■□□□ 1.07
CCDC27Q2M243 PNRC2-202ENST00000374468 814 ntAPPRIS P1 TSL 2 BASIC21.72■■□□□ 1.07
CCDC27Q2M243 SMN2-201ENST00000380741 900 ntAPPRIS P4 TSL 1 (best) BASIC21.72■■□□□ 1.07
CCDC27Q2M243 MECP2-203ENST00000407218 1174 ntTSL 5 BASIC21.72■■□□□ 1.07
CCDC27Q2M243 CPSF1-207ENST00000531727 704 ntTSL 3 BASIC21.72■■□□□ 1.07
CCDC27Q2M243 AC099811.2-203ENST00000592574 958 ntAPPRIS P1 TSL 5 BASIC21.72■■□□□ 1.07
CCDC27Q2M243 SBK3-202ENST00000612221 1270 ntAPPRIS P1 TSL 5 BASIC21.72■■□□□ 1.07
CCDC27Q2M243 LINC01635-202ENST00000635097 1023 ntTSL 5 BASIC21.72■■□□□ 1.07
CCDC27Q2M243 SMN2-216ENST00000638794 846 ntAPPRIS ALT2 TSL 5 BASIC21.72■■□□□ 1.07
CCDC27Q2M243 DOK4-201ENST00000340099 2772 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
CCDC27Q2M243 TMEM189-UBE2V1-201ENST00000341698 2757 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
CCDC27Q2M243 PNRC1-202ENST00000354922 1345 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
CCDC27Q2M243 SETD7-204ENST00000506866 1602 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
CCDC27Q2M243 AC110813.1-201ENST00000507934 2209 ntTSL 2 BASIC21.72■■□□□ 1.07
CCDC27Q2M243 TNPO2-201ENST00000356861 4962 ntAPPRIS ALT1 TSL 1 (best) BASIC21.72■■□□□ 1.07
CCDC27Q2M243 AIFM1-201ENST00000287295 2260 ntAPPRIS P4 TSL 1 (best) BASIC21.72■■□□□ 1.07
CCDC27Q2M243 KRT35-202ENST00000393989 1670 ntAPPRIS P1 TSL 5 BASIC21.72■■□□□ 1.07
CCDC27Q2M243 PDE4DIP-230ENST00000530472 1690 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
CCDC27Q2M243 GABRD-218ENST00000640949 1684 ntTSL 5 BASIC21.72■■□□□ 1.07
CCDC27Q2M243 SORCS3-202ENST00000369701 5757 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
CCDC27Q2M243 MAPKAP1-208ENST00000394063 2977 ntTSL 5 BASIC21.72■■□□□ 1.07
CCDC27Q2M243 PPP1R18-201ENST00000274853 4599 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
CCDC27Q2M243 PPP1R18-205ENST00000615527 4597 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
CCDC27Q2M243 PKN3-201ENST00000291906 3375 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
CCDC27Q2M243 TBC1D2-202ENST00000375063 2100 ntTSL 1 (best) BASIC21.71■■□□□ 1.07
CCDC27Q2M243 IL3RA-202ENST00000381469 1476 ntTSL 5 BASIC21.71■■□□□ 1.07
CCDC27Q2M243 GHDC-202ENST00000414034 2496 ntTSL 2 BASIC21.71■■□□□ 1.07
CCDC27Q2M243 GALNT14-201ENST00000324589 2169 ntTSL 2 BASIC21.71■■□□□ 1.07
CCDC27Q2M243 SEPT4-201ENST00000317256 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC21.71■■□□□ 1.07
CCDC27Q2M243 NQO2-201ENST00000338130 1515 ntAPPRIS P1 TSL 2 BASIC21.71■■□□□ 1.07
CCDC27Q2M243 F10-202ENST00000375559 1517 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
CCDC27Q2M243 DEF8-225ENST00000569453 1852 ntAPPRIS P4 TSL 2 BASIC21.71■■□□□ 1.07
CCDC27Q2M243 RAB37-208ENST00000402449 1560 ntAPPRIS P3 TSL 2 BASIC21.71■■□□□ 1.07
CCDC27Q2M243 FAM60A-203ENST00000454658 1555 ntAPPRIS P1 TSL 2 BASIC21.71■■□□□ 1.07
CCDC27Q2M243 PHF20L1-220ENST00000622263 3375 ntAPPRIS P1 TSL 5 BASIC21.71■■□□□ 1.07
CCDC27Q2M243 MEPCE-201ENST00000310512 3030 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
CCDC27Q2M243 NUPR2-201ENST00000329309 603 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
CCDC27Q2M243 PDLIM7-201ENST00000355572 977 ntTSL 1 (best) BASIC21.71■■□□□ 1.07
CCDC27Q2M243 CTBP1-AS2-204ENST00000514984 533 ntTSL 4 BASIC21.71■■□□□ 1.07
CCDC27Q2M243 IGHV3OR16-6-201ENST00000568775 360 ntBASIC21.71■■□□□ 1.07
CCDC27Q2M243 METTL23-202ENST00000586200 465 ntTSL 1 (best) BASIC21.71■■□□□ 1.07
CCDC27Q2M243 IGFLR1-205ENST00000588992 730 ntAPPRIS ALT2 TSL 2 BASIC21.71■■□□□ 1.07
CCDC27Q2M243 METTL23-212ENST00000590964 1006 ntTSL 1 (best) BASIC21.71■■□□□ 1.07
CCDC27Q2M243 SIGLEC7-205ENST00000600577 616 ntTSL 1 (best) BASIC21.71■■□□□ 1.07
CCDC27Q2M243 AC016027.1-202ENST00000607927 1699 ntBASIC21.71■■□□□ 1.07
CCDC27Q2M243 ARCN1-203ENST00000392859 1709 ntTSL 2 BASIC21.71■■□□□ 1.07
CCDC27Q2M243 SLC43A3-203ENST00000395124 2617 ntAPPRIS P3 TSL 1 (best) BASIC21.71■■□□□ 1.07
CCDC27Q2M243 AC087289.2-201ENST00000587267 1419 ntTSL 1 (best) BASIC21.71■■□□□ 1.07
CCDC27Q2M243 HGNC:18790-203ENST00000433139 2254 ntAPPRIS P1 TSL 2 BASIC21.71■■□□□ 1.07
CCDC27Q2M243 CAMKV-204ENST00000466940 1475 ntTSL 2 BASIC21.71■■□□□ 1.07
CCDC27Q2M243 LRCH2-202ENST00000538422 4868 ntAPPRIS ALT2 TSL 1 (best) BASIC21.71■■□□□ 1.07
CCDC27Q2M243 EIF4G3-214ENST00000634879 5325 ntTSL 5 BASIC21.7■■□□□ 1.07
CCDC27Q2M243 NR2C1-219ENST00000622476 1561 ntTSL 5 BASIC21.7■■□□□ 1.06
CCDC27Q2M243 ARID1B-203ENST00000350026 7962 ntAPPRIS P3 TSL 1 (best) BASIC21.7■■□□□ 1.06
CCDC27Q2M243 CDK4-201ENST00000257904 2076 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
CCDC27Q2M243 BX088651.4-201ENST00000435586 2579 ntTSL 2 BASIC21.7■■□□□ 1.06
CCDC27Q2M243 FADS1-216ENST00000542506 1725 ntTSL 2 BASIC21.7■■□□□ 1.06
CCDC27Q2M243 LGMN-211ENST00000555699 1728 ntTSL 5 BASIC21.7■■□□□ 1.06
CCDC27Q2M243 RUBCNL-203ENST00000378787 2731 ntTSL 2 BASIC21.7■■□□□ 1.06
CCDC27Q2M243 SPAG9-202ENST00000357122 4761 ntAPPRIS P2 TSL 1 (best) BASIC21.7■■□□□ 1.06
CCDC27Q2M243 DNAJB8-AS1-201ENST00000471626 1798 ntTSL 2 BASIC21.7■■□□□ 1.06
CCDC27Q2M243 SPACA4-201ENST00000321762 972 ntAPPRIS P1 BASIC21.7■■□□□ 1.06
CCDC27Q2M243 HCCS-203ENST00000380763 1000 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
CCDC27Q2M243 AL355306.1-201ENST00000415580 579 ntBASIC21.7■■□□□ 1.06
CCDC27Q2M243 SAPCD1-209ENST00000425424 820 ntAPPRIS ALT2 TSL 5 BASIC21.7■■□□□ 1.06
CCDC27Q2M243 AC097532.1-201ENST00000440802 322 ntTSL 2 BASIC21.7■■□□□ 1.06
CCDC27Q2M243 ACTG1P14-201ENST00000446382 1122 ntBASIC21.7■■□□□ 1.06
CCDC27Q2M243 CR559946.1-201ENST00000453835 531 ntTSL 4 BASIC21.7■■□□□ 1.06
CCDC27Q2M243 EHMT1-216ENST00000493484 1182 ntTSL 3 BASIC21.7■■□□□ 1.06
CCDC27Q2M243 YBX1P5-201ENST00000509441 847 ntBASIC21.7■■□□□ 1.06
CCDC27Q2M243 TMEM88-202ENST00000574668 510 ntTSL 2 BASIC21.7■■□□□ 1.06
CCDC27Q2M243 HOTTIP_1.1-201ENST00000620415 57 ntBASIC21.7■■□□□ 1.06
CCDC27Q2M243 SMC4-201ENST00000344722 5356 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
CCDC27Q2M243 CLU-215ENST00000523500 2381 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
CCDC27Q2M243 PIKFYVE-204ENST00000407449 1898 ntTSL 1 (best) BASIC21.7■■□□□ 1.06
CCDC27Q2M243 GPS1-202ENST00000320548 1949 ntTSL 2 BASIC21.7■■□□□ 1.06
CCDC27Q2M243 WT1-203ENST00000379079 2466 ntTSL 1 (best) BASIC21.7■■□□□ 1.06
CCDC27Q2M243 HNF1A-212ENST00000544413 2014 ntTSL 1 (best) BASIC21.7■■□□□ 1.06
CCDC27Q2M243 CHRNA4-201ENST00000370263 5577 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
CCDC27Q2M243 FHAD1-205ENST00000375997 1459 ntTSL 3 BASIC21.7■■□□□ 1.06
Retrieved 100 of 98,524 protein–RNA pairs in 28.2 ms