Protein–RNA interactions for Protein: Q12805

EFEMP1, EGF-containing fibulin-like extracellular matrix protein 1, humanhuman

Predictions only

Length 493 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EFEMP1Q12805 CLDN11-201ENST00000064724 2169 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
EFEMP1Q12805 ARHGAP11A-201ENST00000361627 5898 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
EFEMP1Q12805 BHMT2-205ENST00000521567 1537 ntTSL 2 BASIC17.4■□□□□ 0.38
EFEMP1Q12805 RAB11FIP5-205ENST00000486777 6120 ntTSL 5 BASIC17.4■□□□□ 0.38
EFEMP1Q12805 NMD3-202ENST00000460469 3061 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
EFEMP1Q12805 TJP2-202ENST00000377245 4611 ntAPPRIS P4 TSL 1 (best) BASIC17.4■□□□□ 0.38
EFEMP1Q12805 OPCML-202ENST00000374778 1302 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
EFEMP1Q12805 STARD3NL-204ENST00000434197 1341 ntTSL 5 BASIC17.4■□□□□ 0.38
EFEMP1Q12805 SYT6-205ENST00000609117 4424 ntTSL 5 BASIC17.4■□□□□ 0.38
EFEMP1Q12805 AC105020.1-201ENST00000435356 2205 ntBASIC17.4■□□□□ 0.38
EFEMP1Q12805 PAX4-202ENST00000341640 2010 ntAPPRIS P2 TSL 1 (best) BASIC17.4■□□□□ 0.38
EFEMP1Q12805 ZNF584-209ENST00000599238 2288 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
EFEMP1Q12805 INPP5J-213ENST00000620191 2306 ntTSL 1 (best) BASIC17.39■□□□□ 0.38
EFEMP1Q12805 SLC18B1-201ENST00000275227 2368 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.38
EFEMP1Q12805 SEPHS1-202ENST00000378614 2387 ntTSL 1 (best) BASIC17.39■□□□□ 0.38
EFEMP1Q12805 KCNK9-203ENST00000520439 1441 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.38
EFEMP1Q12805 ZNF84-201ENST00000327668 7162 ntAPPRIS P2 TSL 1 (best) BASIC17.39■□□□□ 0.37
EFEMP1Q12805 COPS3-212ENST00000539941 1699 ntTSL 2 BASIC17.39■□□□□ 0.37
EFEMP1Q12805 HMCN2-204ENST00000611173 1920 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
EFEMP1Q12805 ARID5A-201ENST00000357485 2188 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
EFEMP1Q12805 PCDHA13-202ENST00000409494 4884 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
EFEMP1Q12805 ATG2A-203ENST00000421419 1481 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
EFEMP1Q12805 SH2B1-206ENST00000545570 1488 ntTSL 2 BASIC17.39■□□□□ 0.37
EFEMP1Q12805 KCNC4-204ENST00000438661 2953 ntAPPRIS ALT2 TSL 1 (best) BASIC17.39■□□□□ 0.37
EFEMP1Q12805 VEGFA-205ENST00000372067 3535 ntAPPRIS ALT2 TSL 1 (best) BASIC17.39■□□□□ 0.37
EFEMP1Q12805 PTPA-223ENST00000452489 2526 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
EFEMP1Q12805 ORMDL1-203ENST00000392350 2009 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
EFEMP1Q12805 RPS5-202ENST00000596046 1520 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
EFEMP1Q12805 TRPC1-201ENST00000273482 4324 ntAPPRIS P3 TSL 1 (best) BASIC17.39■□□□□ 0.37
EFEMP1Q12805 BLZF1-202ENST00000367807 1295 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
EFEMP1Q12805 HSD17B8-203ENST00000374662 990 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
EFEMP1Q12805 PRORY-201ENST00000382764 878 ntAPPRIS P1 TSL 5 BASIC17.39■□□□□ 0.37
EFEMP1Q12805 WDR53-204ENST00000433160 887 ntTSL 5 BASIC17.39■□□□□ 0.37
EFEMP1Q12805 RPS27L-204ENST00000455271 923 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
EFEMP1Q12805 GSTO1-207ENST00000539281 1052 ntTSL 5 BASIC17.39■□□□□ 0.37
EFEMP1Q12805 OTUB2-202ENST00000553723 708 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
EFEMP1Q12805 FAM227B-204ENST00000558594 1139 ntAPPRIS ALT2 TSL 5 BASIC17.39■□□□□ 0.37
EFEMP1Q12805 IGFLR1-205ENST00000588992 730 ntAPPRIS ALT2 TSL 2 BASIC17.39■□□□□ 0.37
EFEMP1Q12805 RAB9A-203ENST00000618931 737 ntAPPRIS P1 TSL 2 BASIC17.39■□□□□ 0.37
EFEMP1Q12805 PDCD6-214ENST00000628729 1073 ntTSL 5 BASIC17.39■□□□□ 0.37
EFEMP1Q12805 CDC42EP4-209ENST00000630622 240 ntTSL 5 BASIC17.39■□□□□ 0.37
EFEMP1Q12805 UBE2Q2-201ENST00000267938 3130 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
EFEMP1Q12805 CD9-203ENST00000382518 1556 ntAPPRIS P1 TSL 5 BASIC17.39■□□□□ 0.37
EFEMP1Q12805 ELP5-201ENST00000354429 1304 ntAPPRIS P2 TSL 5 BASIC17.39■□□□□ 0.37
EFEMP1Q12805 LINC02138-201ENST00000378340 1326 ntTSL 2 BASIC17.39■□□□□ 0.37
EFEMP1Q12805 WWTR1-201ENST00000360632 2103 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
EFEMP1Q12805 PRMT2-208ENST00000451211 1878 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
EFEMP1Q12805 WWTR1-204ENST00000467467 1603 ntAPPRIS P1 TSL 5 BASIC17.39■□□□□ 0.37
EFEMP1Q12805 MIB2-201ENST00000355826 3290 ntAPPRIS ALT2 TSL 1 (best) BASIC17.39■□□□□ 0.37
EFEMP1Q12805 PTPN20-203ENST00000374342 1929 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
EFEMP1Q12805 SSR4-201ENST00000320857 1671 ntAPPRIS P1 TSL 2 BASIC17.39■□□□□ 0.37
EFEMP1Q12805 KLC1-202ENST00000334553 2524 ntTSL 5 BASIC17.39■□□□□ 0.37
EFEMP1Q12805 AL139300.1-201ENST00000472726 2505 ntAPPRIS P1 TSL 2 BASIC17.39■□□□□ 0.37
EFEMP1Q12805 CD8A-202ENST00000352580 1977 ntAPPRIS ALT2 TSL 2 BASIC17.39■□□□□ 0.37
EFEMP1Q12805 C2orf54-203ENST00000402775 1958 ntAPPRIS ALT2 TSL 2 BASIC17.39■□□□□ 0.37
EFEMP1Q12805 WASH6P-202ENST00000359512 1437 ntBASIC17.38■□□□□ 0.37
EFEMP1Q12805 SIN3A-203ENST00000394949 4930 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
EFEMP1Q12805 ABCF3-203ENST00000429586 2624 ntAPPRIS P2 TSL 1 (best) BASIC17.38■□□□□ 0.37
EFEMP1Q12805 DNM2-201ENST00000355667 3541 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
EFEMP1Q12805 EIF4H-201ENST00000265753 2679 ntAPPRIS P4 TSL 2 BASIC17.38■□□□□ 0.37
EFEMP1Q12805 TNIP1-208ENST00000520931 2680 ntAPPRIS ALT2 TSL 1 (best) BASIC17.38■□□□□ 0.37
EFEMP1Q12805 SPOP-201ENST00000347630 2965 ntAPPRIS P1 TSL 5 BASIC17.38■□□□□ 0.37
EFEMP1Q12805 VPS51-201ENST00000279281 2714 ntAPPRIS P2 TSL 1 (best) BASIC17.38■□□□□ 0.37
EFEMP1Q12805 STEAP3-204ENST00000409811 2103 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
EFEMP1Q12805 LINC00336-201ENST00000477984 2107 ntTSL 2 BASIC17.38■□□□□ 0.37
EFEMP1Q12805 PSMD5-203ENST00000373904 1538 ntTSL 2 BASIC17.38■□□□□ 0.37
EFEMP1Q12805 LITAF-202ENST00000381810 1527 ntTSL 5 BASIC17.38■□□□□ 0.37
EFEMP1Q12805 SLC25A35-205ENST00000580340 1541 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
EFEMP1Q12805 C1orf115-201ENST00000294889 3413 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
EFEMP1Q12805 PHGDH-202ENST00000369409 1882 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
EFEMP1Q12805 PHF19-201ENST00000312189 836 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
EFEMP1Q12805 GBGT1-201ENST00000372036 871 ntTSL 3 BASIC17.38■□□□□ 0.37
EFEMP1Q12805 LCN2-203ENST00000373017 848 ntAPPRIS P2 TSL 5 BASIC17.38■□□□□ 0.37
EFEMP1Q12805 CLIC1-208ENST00000375784 1254 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
EFEMP1Q12805 CCND3-213ENST00000510503 1257 ntTSL 3 BASIC17.38■□□□□ 0.37
EFEMP1Q12805 RIMS4-202ENST00000541604 1036 ntAPPRIS ALT1 TSL 1 (best) BASIC17.38■□□□□ 0.37
EFEMP1Q12805 COX14-202ENST00000548985 677 ntAPPRIS P1 TSL 2 BASIC17.38■□□□□ 0.37
EFEMP1Q12805 AC010615.2-202ENST00000597444 832 ntTSL 3 BASIC17.38■□□□□ 0.37
EFEMP1Q12805 AC004835.2-201ENST00000603762 682 ntBASIC17.38■□□□□ 0.37
EFEMP1Q12805 AC004832.1-201ENST00000610936 1005 ntTSL 5 BASIC17.38■□□□□ 0.37
EFEMP1Q12805 ATP6AP2-225ENST00000637482 1648 ntAPPRIS ALT2 TSL 5 BASIC17.38■□□□□ 0.37
EFEMP1Q12805 TMEM225B-202ENST00000431679 1314 ntAPPRIS P1 TSL 5 BASIC17.38■□□□□ 0.37
EFEMP1Q12805 PRRG3-205ENST00000538575 1303 ntAPPRIS P1 TSL 5 BASIC17.38■□□□□ 0.37
EFEMP1Q12805 MAP6-202ENST00000434603 4329 ntAPPRIS ALT2 TSL 1 (best) BASIC17.38■□□□□ 0.37
EFEMP1Q12805 LPAR5-202ENST00000431922 2695 ntAPPRIS P1 TSL 2 BASIC17.38■□□□□ 0.37
EFEMP1Q12805 C12orf40-202ENST00000405531 1656 ntAPPRIS ALT2 TSL 1 (best) BASIC17.38■□□□□ 0.37
EFEMP1Q12805 AC016027.1-202ENST00000607927 1699 ntBASIC17.38■□□□□ 0.37
EFEMP1Q12805 BCL2L12-203ENST00000441864 1371 ntAPPRIS ALT2 TSL 1 (best) BASIC17.38■□□□□ 0.37
EFEMP1Q12805 MAP4K1-203ENST00000586296 1363 ntTSL 5 BASIC17.38■□□□□ 0.37
EFEMP1Q12805 GALNT9-202ENST00000397325 1727 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
EFEMP1Q12805 AL355987.1-201ENST00000435202 2420 ntAPPRIS P1 TSL 2 BASIC17.38■□□□□ 0.37
EFEMP1Q12805 DCAF17-211ENST00000539783 5623 ntAPPRIS ALT2 TSL 5 BASIC17.38■□□□□ 0.37
EFEMP1Q12805 C6orf47-202ENST00000375911 2475 ntAPPRIS P1 BASIC17.38■□□□□ 0.37
EFEMP1Q12805 SNX33P1-201ENST00000592116 1762 ntBASIC17.38■□□□□ 0.37
EFEMP1Q12805 ASIC3-203ENST00000357922 2232 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
EFEMP1Q12805 CHCHD3-201ENST00000262570 1598 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
EFEMP1Q12805 HOXB6-203ENST00000484302 1960 ntAPPRIS P1 TSL 2 BASIC17.37■□□□□ 0.37
EFEMP1Q12805 CCDC142-201ENST00000290418 2835 ntAPPRIS P2 TSL 2 BASIC17.37■□□□□ 0.37
EFEMP1Q12805 PROSER2-201ENST00000277570 3333 ntAPPRIS P2 TSL 1 (best) BASIC17.37■□□□□ 0.37
EFEMP1Q12805 WDR90-209ENST00000547944 1672 ntTSL 2 BASIC17.37■□□□□ 0.37
Retrieved 100 of 98,524 protein–RNA pairs in 27 ms