Protein–RNA interactions for Protein: Q04837

SSBP1, Single-stranded DNA-binding protein, mitochondrial, humanhuman

Known RBP Predictions only

Length 148 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP1Q04837 DYRK3-201ENST00000367106 2329 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
SSBP1Q04837 C1orf43-201ENST00000350592 1610 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
SSBP1Q04837 CD55-204ENST00000367064 2760 ntAPPRIS P3 TSL 1 (best) BASIC14.22□□□□□ -0.13
SSBP1Q04837 FGFR1OP2-201ENST00000229395 2924 ntTSL 2 BASIC14.22□□□□□ -0.13
SSBP1Q04837 PARVB-203ENST00000404989 1591 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
SSBP1Q04837 PARVB-204ENST00000406477 1569 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
SSBP1Q04837 CACNA1G-201ENST00000352832 7848 ntAPPRIS ALT2 TSL 1 (best) BASIC14.22□□□□□ -0.13
SSBP1Q04837 DRC7-201ENST00000336825 2680 ntAPPRIS ALT2 TSL 2 BASIC14.22□□□□□ -0.13
SSBP1Q04837 MAGEA12-202ENST00000393869 1761 ntAPPRIS P1 TSL 2 BASIC14.22□□□□□ -0.13
SSBP1Q04837 AKAP1-202ENST00000337714 3970 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
SSBP1Q04837 VPS37D-202ENST00000451519 1303 ntTSL 5 BASIC14.22□□□□□ -0.13
SSBP1Q04837 RBFOX1-205ENST00000436368 1530 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
SSBP1Q04837 BAD-201ENST00000309032 929 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
SSBP1Q04837 IMMP2L-201ENST00000331762 1205 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
SSBP1Q04837 KCNK7-202ENST00000342202 1283 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
SSBP1Q04837 USF2-203ENST00000379134 648 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
SSBP1Q04837 ST6GALNAC4P1-201ENST00000435385 499 ntBASIC14.22□□□□□ -0.13
SSBP1Q04837 AL732437.1-201ENST00000442008 595 ntTSL 4 BASIC14.22□□□□□ -0.13
SSBP1Q04837 HMGB3P22-201ENST00000442010 597 ntTSL 2 BASIC14.22□□□□□ -0.13
SSBP1Q04837 DANCR-204ENST00000444958 709 ntTSL 3 BASIC14.22□□□□□ -0.13
SSBP1Q04837 RPL39L-203ENST00000455270 653 ntAPPRIS P1 TSL 2 BASIC14.22□□□□□ -0.13
SSBP1Q04837 AC098590.1-201ENST00000468126 897 ntBASIC14.22□□□□□ -0.13
SSBP1Q04837 MOK-234ENST00000524370 1165 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
SSBP1Q04837 KLK12-205ENST00000529888 735 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
SSBP1Q04837 AC008687.7-201ENST00000593309 920 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
SSBP1Q04837 NFIB-212ENST00000622520 1274 ntTSL 5 BASIC14.22□□□□□ -0.13
SSBP1Q04837 AD001527.2-201ENST00000622994 785 ntBASIC14.22□□□□□ -0.13
SSBP1Q04837 ABBA01031661.1-201ENST00000634362 1253 ntBASIC14.22□□□□□ -0.13
SSBP1Q04837 NBEAL2-205ENST00000450053 8827 ntAPPRIS P1 TSL 2 BASIC14.22□□□□□ -0.13
SSBP1Q04837 SPON1-201ENST00000576479 4837 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
SSBP1Q04837 AQP1-201ENST00000311813 2913 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
SSBP1Q04837 MBD1-222ENST00000590208 2913 ntAPPRIS ALT2 TSL 1 (best) BASIC14.22□□□□□ -0.13
SSBP1Q04837 AC023157.3-201ENST00000619086 2088 ntBASIC14.22□□□□□ -0.13
SSBP1Q04837 RFK-201ENST00000376736 2684 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
SSBP1Q04837 LINC00884-202ENST00000448892 2680 ntTSL 5 BASIC14.22□□□□□ -0.13
SSBP1Q04837 TRIM73-205ENST00000450434 1425 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
SSBP1Q04837 PHKA1-202ENST00000373539 4476 ntTSL 5 BASIC14.22□□□□□ -0.13
SSBP1Q04837 ATP2A3-205ENST00000397041 4675 ntAPPRIS P4 TSL 1 (best) BASIC14.22□□□□□ -0.13
SSBP1Q04837 NR2E3-204ENST00000621736 2032 ntTSL 2 BASIC14.22□□□□□ -0.13
SSBP1Q04837 DNAJB8-AS1-201ENST00000471626 1798 ntTSL 2 BASIC14.22□□□□□ -0.13
SSBP1Q04837 UBE3A-227ENST00000638011 8742 ntAPPRIS ALT1 TSL 5 BASIC14.21□□□□□ -0.13
SSBP1Q04837 MPL-201ENST00000372470 1908 ntAPPRIS P2 TSL 1 (best) BASIC14.21□□□□□ -0.13
SSBP1Q04837 LHCGR-203ENST00000403273 1921 ntTSL 5 BASIC14.21□□□□□ -0.13
SSBP1Q04837 AC092718.8-201ENST00000640345 2892 ntAPPRIS P1 TSL 5 BASIC14.21□□□□□ -0.13
SSBP1Q04837 FADS2-202ENST00000278840 3630 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
SSBP1Q04837 MDFIC-202ENST00000393486 4393 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
SSBP1Q04837 TNXB-208ENST00000611016 6083 ntTSL 5 BASIC14.21□□□□□ -0.13
SSBP1Q04837 GRID2IP-201ENST00000435185 3215 ntTSL 5 BASIC14.21□□□□□ -0.13
SSBP1Q04837 RFXANK-205ENST00000456252 1325 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
SSBP1Q04837 TXNDC2-201ENST00000306084 1873 ntAPPRIS ALT2 TSL 1 (best) BASIC14.21□□□□□ -0.13
SSBP1Q04837 DBET-201ENST00000630918 3363 ntBASIC14.21□□□□□ -0.13
SSBP1Q04837 PITPNA-201ENST00000313486 3912 ntAPPRIS P2 TSL 5 BASIC14.21□□□□□ -0.13
SSBP1Q04837 DNM1-208ENST00000486160 3181 ntAPPRIS ALT1 TSL 1 (best) BASIC14.21□□□□□ -0.13
SSBP1Q04837 PTHLH-202ENST00000395868 1674 ntAPPRIS P3 TSL 1 (best) BASIC14.21□□□□□ -0.13
SSBP1Q04837 COL26A1-203ENST00000613501 2970 ntAPPRIS ALT2 TSL 1 (best) BASIC14.21□□□□□ -0.13
SSBP1Q04837 ESPNL-201ENST00000343063 4836 ntAPPRIS P1 TSL 2 BASIC14.21□□□□□ -0.13
SSBP1Q04837 SPOCK1-202ENST00000394945 4846 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
SSBP1Q04837 FP565260.3-204ENST00000623795 2238 ntTSL 2 BASIC14.21□□□□□ -0.13
SSBP1Q04837 AC013268.4-201ENST00000637413 2228 ntBASIC14.21□□□□□ -0.13
SSBP1Q04837 TGFBR2-202ENST00000359013 4605 ntAPPRIS ALT2 TSL 1 (best) BASIC14.21□□□□□ -0.13
SSBP1Q04837 TUBB6-211ENST00000591208 1492 ntTSL 5 BASIC14.21□□□□□ -0.13
SSBP1Q04837 FBN2-205ENST00000508989 4987 ntTSL 2 BASIC14.21□□□□□ -0.13
SSBP1Q04837 ZNF219-202ENST00000421093 2908 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
SSBP1Q04837 FAM181A-201ENST00000267594 1816 ntTSL 2 BASIC14.21□□□□□ -0.13
SSBP1Q04837 RABAC1-201ENST00000222008 821 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
SSBP1Q04837 TMEM53-201ENST00000372235 890 ntTSL 2 BASIC14.21□□□□□ -0.13
SSBP1Q04837 HDAC11-204ENST00000404040 967 ntTSL 3 BASIC14.21□□□□□ -0.13
SSBP1Q04837 TSPY7P-201ENST00000431358 1114 ntBASIC14.21□□□□□ -0.13
SSBP1Q04837 AC092718.1-201ENST00000501068 1088 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
SSBP1Q04837 LINC01184-202ENST00000501173 949 ntTSL 5 BASIC14.21□□□□□ -0.13
SSBP1Q04837 GUSBP12-201ENST00000513727 720 ntBASIC14.21□□□□□ -0.13
SSBP1Q04837 AC087623.2-201ENST00000528407 534 ntTSL 4 BASIC14.21□□□□□ -0.13
SSBP1Q04837 CD320-202ENST00000537716 1119 ntTSL 2 BASIC14.21□□□□□ -0.13
SSBP1Q04837 AC097641.1-201ENST00000580671 588 ntTSL 4 BASIC14.21□□□□□ -0.13
SSBP1Q04837 RABAC1-208ENST00000601078 728 ntTSL 3 BASIC14.21□□□□□ -0.13
SSBP1Q04837 CYB561D2-210ENST00000607121 1004 ntTSL 2 BASIC14.21□□□□□ -0.13
SSBP1Q04837 AL023973.1-201ENST00000624619 620 ntBASIC14.21□□□□□ -0.13
SSBP1Q04837 RAB34-226ENST00000636772 1180 ntTSL 5 BASIC14.21□□□□□ -0.13
SSBP1Q04837 DACT3-203ENST00000410105 3085 ntTSL 2 BASIC14.21□□□□□ -0.13
SSBP1Q04837 KDM8-202ENST00000441782 1612 ntTSL 2 BASIC14.21□□□□□ -0.13
SSBP1Q04837 GALNT10-203ENST00000425427 4344 ntTSL 2 BASIC14.21□□□□□ -0.13
SSBP1Q04837 BCAT2-209ENST00000599246 1449 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
SSBP1Q04837 ARHGAP5-205ENST00000433497 3047 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
SSBP1Q04837 ANO1-201ENST00000316296 2118 ntTSL 2 BASIC14.21□□□□□ -0.13
SSBP1Q04837 ASAH1-231ENST00000636577 2129 ntTSL 5 BASIC14.21□□□□□ -0.13
SSBP1Q04837 SIK3-205ENST00000446921 3858 ntAPPRIS ALT2 TSL 1 (best) BASIC14.21□□□□□ -0.14
SSBP1Q04837 HPS1-202ENST00000338546 1580 ntTSL 1 (best) BASIC14.21□□□□□ -0.14
SSBP1Q04837 ASAH1-223ENST00000636171 2283 ntTSL 5 BASIC14.21□□□□□ -0.14
SSBP1Q04837 CXorf40A-209ENST00000441248 2411 ntAPPRIS P3 TSL 1 (best) BASIC14.21□□□□□ -0.14
SSBP1Q04837 NR4A2-203ENST00000409108 1735 ntTSL 5 BASIC14.21□□□□□ -0.14
SSBP1Q04837 CCDC74B-202ENST00000392984 1353 ntAPPRIS ALT2 TSL 5 BASIC14.21□□□□□ -0.14
SSBP1Q04837 TRAPPC11-202ENST00000357207 4435 ntTSL 1 (best) BASIC14.21□□□□□ -0.14
SSBP1Q04837 TMPO-AS1-202ENST00000548760 3357 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
SSBP1Q04837 EPHA10-203ENST00000427468 3167 ntAPPRIS ALT2 TSL 5 BASIC14.2□□□□□ -0.14
SSBP1Q04837 AL355315.1-201ENST00000370649 1848 ntAPPRIS P1 TSL 2 BASIC14.2□□□□□ -0.14
SSBP1Q04837 RPLP0-219ENST00000551150 1344 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
SSBP1Q04837 NDRG1-202ENST00000414097 3755 ntAPPRIS P1 TSL 2 BASIC14.2□□□□□ -0.14
SSBP1Q04837 NOVA2-201ENST00000263257 7803 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
SSBP1Q04837 PCDH19-202ENST00000373034 9756 ntAPPRIS ALT2 TSL 1 (best) BASIC14.2□□□□□ -0.14
SSBP1Q04837 MAGEA8-201ENST00000286482 1778 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Retrieved 100 of 98,524 protein–RNA pairs in 39.8 ms