Protein–RNA interactions for Protein: P67936

TPM4, Tropomyosin alpha-4 chain, humanhuman

Predictions only

Length 248 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TPM4P67936 CUL3-202ENST00000344951 6592 ntTSL 2 BASIC18.86■□□□□ 0.61
TPM4P67936 MED25-202ENST00000538643 1623 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
TPM4P67936 INA-201ENST00000369849 3231 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
TPM4P67936 ZNF84-208ENST00000539354 3237 ntAPPRIS P2 TSL 1 (best) BASIC18.86■□□□□ 0.61
TPM4P67936 CDS2-203ENST00000460006 9298 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
TPM4P67936 PLIN1-202ENST00000430628 2900 ntAPPRIS P1 TSL 5 BASIC18.86■□□□□ 0.61
TPM4P67936 JMJD7-201ENST00000397299 1416 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
TPM4P67936 CRB3-203ENST00000598494 1443 ntAPPRIS ALT2 TSL 2 BASIC18.86■□□□□ 0.61
TPM4P67936 RAB40B-206ENST00000571995 3859 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
TPM4P67936 PYDC1-201ENST00000302964 813 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
TPM4P67936 AC007731.5-201ENST00000429594 644 ntAPPRIS P1 TSL 5 BASIC18.86■□□□□ 0.61
TPM4P67936 AC136604.3-201ENST00000508188 429 ntTSL 3 BASIC18.86■□□□□ 0.61
TPM4P67936 CLN6-204ENST00000564752 900 ntTSL 3 BASIC18.86■□□□□ 0.61
TPM4P67936 AC008687.7-201ENST00000593309 920 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
TPM4P67936 AD001527.2-201ENST00000622994 785 ntBASIC18.86■□□□□ 0.61
TPM4P67936 CLN6-214ENST00000636314 442 ntTSL 3 BASIC18.86■□□□□ 0.61
TPM4P67936 MPPED1-202ENST00000417669 3657 ntAPPRIS P1 TSL 5 BASIC18.86■□□□□ 0.61
TPM4P67936 TYSND1-201ENST00000287078 3644 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
TPM4P67936 FOXP3-202ENST00000376199 2274 ntTSL 2 BASIC18.86■□□□□ 0.61
TPM4P67936 LSP1-202ENST00000381775 2016 ntAPPRIS ALT2 TSL 2 BASIC18.86■□□□□ 0.61
TPM4P67936 CCDC59-201ENST00000256151 1983 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
TPM4P67936 CCDC40-201ENST00000269318 1970 ntTSL 2 BASIC18.86■□□□□ 0.61
TPM4P67936 RUSC1-203ENST00000368349 1968 ntAPPRIS P3 TSL 1 (best) BASIC18.86■□□□□ 0.61
TPM4P67936 MYH6-201ENST00000356287 5871 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
TPM4P67936 ARHGEF28-211ENST00000512883 2936 ntTSL 2 BASIC18.86■□□□□ 0.61
TPM4P67936 AC132872.4-202ENST00000622924 2756 ntBASIC18.86■□□□□ 0.61
TPM4P67936 CYB5R3-204ENST00000407332 1849 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
TPM4P67936 B3GNT4-206ENST00000546192 2749 ntAPPRIS P1 TSL 2 BASIC18.86■□□□□ 0.61
TPM4P67936 CHTF18-220ENST00000631357 3555 ntAPPRIS ALT2 TSL 5 BASIC18.86■□□□□ 0.61
TPM4P67936 AC092850.2-201ENST00000623821 2697 ntBASIC18.86■□□□□ 0.61
TPM4P67936 UBXN2B-201ENST00000399598 5068 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
TPM4P67936 CYP2D6-203ENST00000360608 1684 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
TPM4P67936 USP43-201ENST00000285199 4169 ntAPPRIS P3 TSL 1 (best) BASIC18.85■□□□□ 0.61
TPM4P67936 SYNM-201ENST00000328642 3960 ntAPPRIS ALT2 TSL 1 (best) BASIC18.85■□□□□ 0.61
TPM4P67936 MYH11-211ENST00000576790 6272 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
TPM4P67936 SPN-201ENST00000360121 6894 ntAPPRIS P2 TSL 1 (best) BASIC18.85■□□□□ 0.61
TPM4P67936 TVP23C-201ENST00000225576 1527 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
TPM4P67936 ZNF799-201ENST00000419318 3036 ntTSL 2 BASIC18.85■□□□□ 0.61
TPM4P67936 PCM1-206ENST00000518537 2171 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
TPM4P67936 KLHL36-204ENST00000564996 2173 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
TPM4P67936 CSAD-208ENST00000444623 2122 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
TPM4P67936 TUBGCP2-203ENST00000368563 4218 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
TPM4P67936 BSCL2-201ENST00000278893 1364 ntAPPRIS ALT2 TSL 2 BASIC18.85■□□□□ 0.61
TPM4P67936 ZNF57-201ENST00000306908 2003 ntAPPRIS P2 TSL 1 (best) BASIC18.85■□□□□ 0.61
TPM4P67936 ZNF57-205ENST00000614108 2002 ntAPPRIS ALT2 TSL 5 BASIC18.85■□□□□ 0.61
TPM4P67936 AL365209.1-201ENST00000624418 6473 ntBASIC18.85■□□□□ 0.61
TPM4P67936 PSMA7-201ENST00000370858 925 ntTSL 2 BASIC18.85■□□□□ 0.61
TPM4P67936 PSMA7-203ENST00000370873 996 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
TPM4P67936 AL645929.1-201ENST00000420084 975 ntBASIC18.85■□□□□ 0.61
TPM4P67936 ADCYAP1-202ENST00000450565 918 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
TPM4P67936 ULK4P3-205ENST00000568486 1158 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
TPM4P67936 LINC00092-202ENST00000580908 580 ntTSL 2 BASIC18.85■□□□□ 0.61
TPM4P67936 AL807752.6-202ENST00000622933 765 ntAPPRIS P5 TSL 3 BASIC18.85■□□□□ 0.61
TPM4P67936 MAPT-204ENST00000344290 6816 ntAPPRIS ALT2 TSL 1 (best) BASIC18.85■□□□□ 0.61
TPM4P67936 GPR161-202ENST00000367835 2400 ntAPPRIS P1 TSL 2 BASIC18.85■□□□□ 0.61
TPM4P67936 MGME1-201ENST00000377704 1781 ntTSL 3 BASIC18.85■□□□□ 0.61
TPM4P67936 SGO1-201ENST00000263753 2338 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
TPM4P67936 MARK4-202ENST00000300843 5209 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
TPM4P67936 SIL1-213ENST00000509534 1714 ntTSL 5 BASIC18.85■□□□□ 0.61
TPM4P67936 MAGI1-201ENST00000330909 7415 ntAPPRIS ALT2 TSL 1 (best) BASIC18.85■□□□□ 0.61
TPM4P67936 YTHDF1-202ENST00000370339 3301 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
TPM4P67936 WWTR1-204ENST00000467467 1603 ntAPPRIS P1 TSL 5 BASIC18.85■□□□□ 0.61
TPM4P67936 ARVCF-204ENST00000406522 2682 ntTSL 5 BASIC18.85■□□□□ 0.61
TPM4P67936 TFAP2A-AS1-201ENST00000420777 1575 ntTSL 5 BASIC18.85■□□□□ 0.61
TPM4P67936 PPP1R21-202ENST00000294952 3142 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
TPM4P67936 DNAH14-206ENST00000400952 1984 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
TPM4P67936 CCDC188-201ENST00000439765 1475 ntAPPRIS P1 TSL 5 BASIC18.84■□□□□ 0.61
TPM4P67936 GCK-202ENST00000345378 2421 ntTSL 2 BASIC18.84■□□□□ 0.61
TPM4P67936 ALOX15-205ENST00000574640 2422 ntTSL 2 BASIC18.84■□□□□ 0.61
TPM4P67936 HSPH1-201ENST00000320027 5191 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
TPM4P67936 ELL-203ENST00000596124 1852 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
TPM4P67936 H1F0-201ENST00000340857 2344 ntAPPRIS P1 BASIC18.84■□□□□ 0.61
TPM4P67936 CCDC8-201ENST00000307522 3213 ntAPPRIS P1 BASIC18.84■□□□□ 0.61
TPM4P67936 APLN-201ENST00000429967 3205 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
TPM4P67936 CALU-205ENST00000535011 3210 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
TPM4P67936 ITPRIPL2-201ENST00000381440 7247 ntAPPRIS P1 BASIC18.84■□□□□ 0.61
TPM4P67936 ZFAND5-204ENST00000376960 2686 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
TPM4P67936 MICAL3-206ENST00000441493 9445 ntAPPRIS P1 TSL 5 BASIC18.84■□□□□ 0.61
TPM4P67936 PTS-201ENST00000280362 935 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
TPM4P67936 CTNS-203ENST00000399306 803 ntTSL 3 BASIC18.84■□□□□ 0.61
TPM4P67936 AC114763.1-202ENST00000414911 867 ntTSL 3 BASIC18.84■□□□□ 0.61
TPM4P67936 ACTG1P4-201ENST00000425123 1122 ntBASIC18.84■□□□□ 0.61
TPM4P67936 USHBP1-203ENST00000431146 2136 ntTSL 2 BASIC18.84■□□□□ 0.61
TPM4P67936 AC246785.2-201ENST00000432512 513 ntBASIC18.84■□□□□ 0.61
TPM4P67936 GFM1-208ENST00000478576 2147 ntTSL 2 BASIC18.84■□□□□ 0.61
TPM4P67936 LY6E-210ENST00000521182 1079 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
TPM4P67936 TGIF1-205ENST00000401449 1670 ntTSL 2 BASIC18.84■□□□□ 0.61
TPM4P67936 CCP110-201ENST00000381396 5446 ntAPPRIS ALT1 TSL 1 (best) BASIC18.84■□□□□ 0.61
TPM4P67936 GCLC-213ENST00000616923 3694 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
TPM4P67936 CCAR2-201ENST00000308511 4853 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
TPM4P67936 GLMP-201ENST00000362007 1604 ntAPPRIS P3 TSL 1 (best) BASIC18.84■□□□□ 0.61
TPM4P67936 AP004609.1-201ENST00000498872 1646 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
TPM4P67936 CD9-203ENST00000382518 1556 ntAPPRIS P1 TSL 5 BASIC18.84■□□□□ 0.61
TPM4P67936 PODNL1-204ENST00000538517 2744 ntTSL 2 BASIC18.84■□□□□ 0.61
TPM4P67936 CNPY4-201ENST00000262932 1502 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
TPM4P67936 EWSR1-201ENST00000331029 2267 ntTSL 5 BASIC18.84■□□□□ 0.61
TPM4P67936 ZBTB22-207ENST00000418724 2645 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
TPM4P67936 PLIN1-201ENST00000300055 2953 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
TPM4P67936 DHX36-202ENST00000329463 2985 ntAPPRIS ALT2 TSL 1 (best) BASIC18.84■□□□□ 0.61
TPM4P67936 FOS-208ENST00000555686 1496 ntTSL 2 BASIC18.84■□□□□ 0.61
Retrieved 100 of 98,524 protein–RNA pairs in 28.3 ms