Protein–RNA interactions for Protein: P67809

YBX1, Nuclease-sensitive element-binding protein 1, humanhuman

Known RBP Predictions only

Length 324 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
YBX1P67809 MPP1-202ENST00000369534 2042 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
YBX1P67809 HCG11-201ENST00000411553 5696 ntBASIC16.35■□□□□ 0.21
YBX1P67809 EVPLL-201ENST00000399134 2095 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
YBX1P67809 VCAN-204ENST00000502527 2087 ntAPPRIS ALT1 TSL 1 (best) BASIC16.35■□□□□ 0.21
YBX1P67809 PTK6-202ENST00000542869 2931 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
YBX1P67809 ADCY1-202ENST00000432715 1693 ntTSL 2 BASIC16.35■□□□□ 0.21
YBX1P67809 ELAVL2-208ENST00000544538 3789 ntAPPRIS P3 TSL 5 BASIC16.35■□□□□ 0.21
YBX1P67809 NICN1-204ENST00000436744 1271 ntTSL 2 BASIC16.35■□□□□ 0.21
YBX1P67809 HCG15-203ENST00000438190 1032 ntTSL 3 BASIC16.35■□□□□ 0.21
YBX1P67809 HCG4B-203ENST00000450128 991 ntBASIC16.35■□□□□ 0.21
YBX1P67809 MRVI1-AS1-203ENST00000529979 784 ntTSL 3 BASIC16.35■□□□□ 0.21
YBX1P67809 AP000442.1-201ENST00000533552 769 ntTSL 5 BASIC16.35■□□□□ 0.21
YBX1P67809 ZFPM1-203ENST00000562437 502 ntTSL 2 BASIC16.35■□□□□ 0.21
YBX1P67809 ANAPC11-210ENST00000574924 722 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
YBX1P67809 PGPEP1-209ENST00000604499 769 ntTSL 5 BASIC16.35■□□□□ 0.21
YBX1P67809 AC011270.2-201ENST00000624293 2550 ntBASIC16.35■□□□□ 0.21
YBX1P67809 EIF4A3-201ENST00000269349 1734 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
YBX1P67809 RUSC1-209ENST00000471876 1749 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
YBX1P67809 PLBD2-201ENST00000280800 4800 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
YBX1P67809 PRMT1-202ENST00000454376 1327 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
YBX1P67809 NIPA2-204ENST00000398014 3130 ntAPPRIS P1 TSL 5 BASIC16.35■□□□□ 0.21
YBX1P67809 FNBP1-202ENST00000420781 5410 ntAPPRIS ALT1 TSL 1 (best) BASIC16.35■□□□□ 0.21
YBX1P67809 TMEM138-201ENST00000278826 1848 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
YBX1P67809 ZNF259P1-201ENST00000407656 1365 ntBASIC16.35■□□□□ 0.21
YBX1P67809 ANAPC13-206ENST00000514612 1420 ntAPPRIS P1 TSL 2 BASIC16.35■□□□□ 0.21
YBX1P67809 ELFN2-208ENST00000430883 1970 ntTSL 2 BASIC16.35■□□□□ 0.21
YBX1P67809 ANKK1-201ENST00000303941 2543 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
YBX1P67809 TPT1-AS1-215ENST00000522673 1519 ntTSL 5 BASIC16.35■□□□□ 0.21
YBX1P67809 FAM189B-202ENST00000361361 3082 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
YBX1P67809 EDC3-202ENST00000426797 2093 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
YBX1P67809 AC138932.1-201ENST00000534164 6830 ntBASIC16.34■□□□□ 0.21
YBX1P67809 CCDC8-201ENST00000307522 3213 ntAPPRIS P1 BASIC16.34■□□□□ 0.21
YBX1P67809 PGAP3-201ENST00000300658 2737 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
YBX1P67809 NKX3-1-201ENST00000380871 3271 ntAPPRIS P3 TSL 1 (best) BASIC16.34■□□□□ 0.21
YBX1P67809 TDRD7-201ENST00000355295 3834 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
YBX1P67809 RECQL4-210ENST00000621189 3896 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
YBX1P67809 PTHLH-202ENST00000395868 1674 ntAPPRIS P3 TSL 1 (best) BASIC16.34■□□□□ 0.21
YBX1P67809 L1CAM-205ENST00000370060 5113 ntAPPRIS P4 TSL 5 BASIC16.34■□□□□ 0.21
YBX1P67809 PRRC2A-201ENST00000376007 6861 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
YBX1P67809 HARS-204ENST00000438307 1789 ntTSL 2 BASIC16.34■□□□□ 0.21
YBX1P67809 WDR81-206ENST00000446363 2968 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
YBX1P67809 LINC00942-201ENST00000515614 2417 ntTSL 5 BASIC16.34■□□□□ 0.21
YBX1P67809 HOXC5-201ENST00000312492 1805 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
YBX1P67809 FCN3-201ENST00000270879 1030 ntAPPRIS P4 TSL 1 (best) BASIC16.34■□□□□ 0.21
YBX1P67809 FCN3-202ENST00000354982 997 ntAPPRIS ALT2 TSL 1 (best) BASIC16.34■□□□□ 0.21
YBX1P67809 KAZN-201ENST00000361144 3838 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
YBX1P67809 ABHD11-203ENST00000395147 812 ntTSL 3 BASIC16.34■□□□□ 0.21
YBX1P67809 WWOX-204ENST00000408984 1227 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
YBX1P67809 PDE6D-202ENST00000409772 672 ntTSL 3 BASIC16.34■□□□□ 0.21
YBX1P67809 WNT7B-203ENST00000410058 714 ntTSL 3 BASIC16.34■□□□□ 0.21
YBX1P67809 CRYGEP-201ENST00000412192 528 ntBASIC16.34■□□□□ 0.21
YBX1P67809 CRCP-205ENST00000431089 942 ntTSL 2 BASIC16.34■□□□□ 0.21
YBX1P67809 AL133375.1-201ENST00000500590 980 ntTSL 5 BASIC16.34■□□□□ 0.21
YBX1P67809 TPD52L1-211ENST00000532429 1022 ntTSL 2 BASIC16.34■□□□□ 0.21
YBX1P67809 AC025162.1-201ENST00000554022 565 ntTSL 4 BASIC16.34■□□□□ 0.21
YBX1P67809 TCAP-202ENST00000578283 583 ntTSL 5 BASIC16.34■□□□□ 0.21
YBX1P67809 FBF1-204ENST00000586631 621 ntAPPRIS ALT2 TSL 2 BASIC16.34■□□□□ 0.21
YBX1P67809 AC064836.3-201ENST00000607928 673 ntBASIC16.34■□□□□ 0.21
YBX1P67809 AC010654.1-201ENST00000615722 808 ntBASIC16.34■□□□□ 0.21
YBX1P67809 HMGCLL1-202ENST00000308161 1314 ntTSL 2 BASIC16.34■□□□□ 0.21
YBX1P67809 FAM3D-201ENST00000358781 1319 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
YBX1P67809 SARDH-202ENST00000371867 1326 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
YBX1P67809 CLN3-216ENST00000565316 1318 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
YBX1P67809 IQSEC2-218ENST00000640694 5958 ntAPPRIS ALT2 TSL 5 BASIC16.34■□□□□ 0.21
YBX1P67809 SEPT11-201ENST00000264893 5593 ntAPPRIS P2 TSL 1 (best) BASIC16.34■□□□□ 0.21
YBX1P67809 NEUROD1-201ENST00000295108 2852 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
YBX1P67809 CYP46A1-201ENST00000261835 2181 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
YBX1P67809 RALYL-208ENST00000522455 2168 ntAPPRIS ALT2 TSL 2 BASIC16.34■□□□□ 0.21
YBX1P67809 UNKL-204ENST00000389221 5116 ntAPPRIS ALT2 TSL 5 BASIC16.34■□□□□ 0.21
YBX1P67809 LRFN2-201ENST00000338305 3270 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
YBX1P67809 RUFY2-205ENST00000454950 2613 ntTSL 2 BASIC16.33■□□□□ 0.21
YBX1P67809 SDK1-202ENST00000404826 10397 ntAPPRIS P2 TSL 1 (best) BASIC16.33■□□□□ 0.21
YBX1P67809 SMTNL2-201ENST00000338859 1919 ntTSL 1 (best) BASIC16.33■□□□□ 0.21
YBX1P67809 PTPN20-203ENST00000374342 1929 ntTSL 1 (best) BASIC16.33■□□□□ 0.21
YBX1P67809 STIM2-203ENST00000467011 3925 ntAPPRIS ALT2 TSL 1 (best) BASIC16.33■□□□□ 0.21
YBX1P67809 FGFR3-204ENST00000412135 3951 ntTSL 5 BASIC16.33■□□□□ 0.21
YBX1P67809 TVP23B-201ENST00000307767 2064 ntAPPRIS P2 TSL 1 (best) BASIC16.33■□□□□ 0.21
YBX1P67809 NF1-211ENST00000487476 2265 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
YBX1P67809 SLC9A7-201ENST00000328306 3838 ntAPPRIS P3 TSL 1 (best) BASIC16.33■□□□□ 0.2
YBX1P67809 PRSS29P-201ENST00000440800 595 ntBASIC16.33■□□□□ 0.2
YBX1P67809 ACTL9-202ENST00000612068 1252 ntBASIC16.33■□□□□ 0.2
YBX1P67809 AP1AR-201ENST00000274000 2902 ntAPPRIS P3 TSL 1 (best) BASIC16.33■□□□□ 0.2
YBX1P67809 PRRT2-205ENST00000567659 1470 ntTSL 2 BASIC16.33■□□□□ 0.2
YBX1P67809 PHF20L1-209ENST00000395386 6237 ntAPPRIS P1 TSL 5 BASIC16.33■□□□□ 0.2
YBX1P67809 MUTYH-201ENST00000354383 1744 ntAPPRIS P4 TSL 1 (best) BASIC16.33■□□□□ 0.2
YBX1P67809 ENC1-201ENST00000302351 5520 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
YBX1P67809 HLA-A-202ENST00000376806 1854 ntBASIC16.33■□□□□ 0.2
YBX1P67809 PDCD1-201ENST00000334409 2114 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
YBX1P67809 ZNF12-204ENST00000405858 5051 ntAPPRIS P4 TSL 1 (best) BASIC16.33■□□□□ 0.2
YBX1P67809 DAG1-219ENST00000538711 5582 ntAPPRIS P1 TSL 5 BASIC16.32■□□□□ 0.2
YBX1P67809 PF4-201ENST00000296029 604 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
YBX1P67809 SHQ1-201ENST00000325599 2879 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
YBX1P67809 KRT76-201ENST00000332411 2529 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
YBX1P67809 RREB1-201ENST00000334984 5789 ntAPPRIS ALT2 TSL 1 (best) BASIC16.32■□□□□ 0.2
YBX1P67809 RNF19A-201ENST00000341084 4285 ntAPPRIS P1 TSL 5 BASIC16.32■□□□□ 0.2
YBX1P67809 DGKZ-202ENST00000343674 3816 ntAPPRIS P3 TSL 2 BASIC16.32■□□□□ 0.2
YBX1P67809 BSG-202ENST00000346916 1605 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
YBX1P67809 RBPJ-204ENST00000348160 1752 ntAPPRIS ALT1 TSL 1 (best) BASIC16.32■□□□□ 0.2
YBX1P67809 MAPKAP1-202ENST00000350766 3256 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
YBX1P67809 BSG-203ENST00000353555 1616 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
Retrieved 100 of 98,524 protein–RNA pairs in 40.8 ms