Protein–RNA interactions for Protein: P61619

SEC61A1, Protein transport protein Sec61 subunit alpha isoform 1, humanhuman

Known RBP Predictions only

Length 476 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SEC61A1P61619 COX5A-204ENST00000567270 579 ntTSL 3 BASIC14.76□□□□□ -0.05
SEC61A1P61619 AC010632.1-201ENST00000590376 572 ntTSL 4 BASIC14.76□□□□□ -0.05
SEC61A1P61619 AC005944.1-201ENST00000592758 564 ntTSL 3 BASIC14.76□□□□□ -0.05
SEC61A1P61619 AC005632.4-201ENST00000613759 431 ntTSL 3 BASIC14.76□□□□□ -0.05
SEC61A1P61619 CDK2AP1-207ENST00000618072 1144 ntTSL 3 BASIC14.76□□□□□ -0.05
SEC61A1P61619 VPS51-217ENST00000639871 243 ntTSL 5 BASIC14.76□□□□□ -0.05
SEC61A1P61619 PCDH10-201ENST00000264360 8489 ntAPPRIS P3 TSL 1 (best) BASIC14.76□□□□□ -0.05
SEC61A1P61619 WDR1-205ENST00000502702 1691 ntTSL 5 BASIC14.76□□□□□ -0.05
SEC61A1P61619 KCNC2-209ENST00000550433 2931 ntAPPRIS ALT2 TSL 1 (best) BASIC14.76□□□□□ -0.05
SEC61A1P61619 CHMP1A-201ENST00000397901 2483 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
SEC61A1P61619 KCNQ2-202ENST00000344462 2750 ntAPPRIS ALT2 TSL 1 (best) BASIC14.76□□□□□ -0.05
SEC61A1P61619 PPP1R16B-202ENST00000373331 6106 ntTSL 5 BASIC14.76□□□□□ -0.05
SEC61A1P61619 AC023830.1-201ENST00000569678 1543 ntTSL 2 BASIC14.76□□□□□ -0.05
SEC61A1P61619 CD151-203ENST00000397421 1486 ntAPPRIS P2 TSL 1 (best) BASIC14.76□□□□□ -0.05
SEC61A1P61619 BAGE2-202ENST00000474011 1482 ntTSL 2 BASIC14.76□□□□□ -0.05
SEC61A1P61619 TNFSF14-202ENST00000599359 1476 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
SEC61A1P61619 RBFOX1-212ENST00000550418 4775 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
SEC61A1P61619 ABHD14B-203ENST00000395008 1818 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
SEC61A1P61619 AC006460.2-201ENST00000638173 4744 ntTSL 5 BASIC14.75□□□□□ -0.05
SEC61A1P61619 PGRMC1-202ENST00000535419 1762 ntTSL 2 BASIC14.75□□□□□ -0.05
SEC61A1P61619 SLC4A2-214ENST00000485713 4925 ntAPPRIS P3 TSL 1 (best) BASIC14.75□□□□□ -0.05
SEC61A1P61619 EPHX2-201ENST00000380476 2064 ntTSL 2 BASIC14.75□□□□□ -0.05
SEC61A1P61619 PTCHD3-202ENST00000622555 1720 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
SEC61A1P61619 TNFRSF10A-201ENST00000221132 2714 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
SEC61A1P61619 ABCB6-201ENST00000265316 3016 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
SEC61A1P61619 H1F0-201ENST00000340857 2344 ntAPPRIS P1 BASIC14.75□□□□□ -0.05
SEC61A1P61619 CLDN14-203ENST00000399136 1330 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
SEC61A1P61619 SDR39U1-206ENST00000553930 1325 ntTSL 5 BASIC14.75□□□□□ -0.05
SEC61A1P61619 EPHX2-204ENST00000518379 1959 ntAPPRIS ALT2 TSL 5 BASIC14.75□□□□□ -0.05
SEC61A1P61619 ANTXRL-206ENST00000622632 1964 ntAPPRIS ALT2 TSL 5 BASIC14.75□□□□□ -0.05
SEC61A1P61619 CTDSP1-201ENST00000273062 2638 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
SEC61A1P61619 CCDC78-201ENST00000293889 1611 ntAPPRIS P2 TSL 1 (best) BASIC14.75□□□□□ -0.05
SEC61A1P61619 USP42-201ENST00000306177 5155 ntAPPRIS P1 TSL 5 BASIC14.75□□□□□ -0.05
SEC61A1P61619 SAP130-203ENST00000357702 4173 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
SEC61A1P61619 UBE3D-203ENST00000369747 1917 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
SEC61A1P61619 FTMT-201ENST00000321339 879 ntAPPRIS P1 BASIC14.75□□□□□ -0.05
SEC61A1P61619 TBC1D7-202ENST00000356436 1116 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
SEC61A1P61619 C6orf48-204ENST00000375639 712 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
SEC61A1P61619 TBC1D7-204ENST00000379300 1276 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
SEC61A1P61619 AC092725.1-201ENST00000565783 499 ntTSL 4 BASIC14.75□□□□□ -0.05
SEC61A1P61619 DCTPP1-204ENST00000568434 853 ntTSL 2 BASIC14.75□□□□□ -0.05
SEC61A1P61619 FAM25C-201ENST00000617224 319 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
SEC61A1P61619 SLC6A8-201ENST00000253122 3763 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
SEC61A1P61619 KPNA2-202ENST00000537025 2456 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
SEC61A1P61619 ARHGEF28-201ENST00000296794 5246 ntTSL 5 BASIC14.75□□□□□ -0.05
SEC61A1P61619 RWDD1-202ENST00000466444 5522 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
SEC61A1P61619 CACNA2D3-201ENST00000288197 3671 ntAPPRIS ALT2 TSL 1 (best) BASIC14.75□□□□□ -0.05
SEC61A1P61619 CACNA2D3-206ENST00000474759 3675 ntAPPRIS P2 TSL 1 (best) BASIC14.75□□□□□ -0.05
SEC61A1P61619 SETD1B-201ENST00000267197 5772 ntAPPRIS ALT2 TSL 5 BASIC14.75□□□□□ -0.05
SEC61A1P61619 LINC00942-201ENST00000515614 2417 ntTSL 5 BASIC14.75□□□□□ -0.05
SEC61A1P61619 MBOAT1-201ENST00000324607 1794 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
SEC61A1P61619 MTFR2-203ENST00000420702 1793 ntAPPRIS P2 TSL 2 BASIC14.75□□□□□ -0.05
SEC61A1P61619 C15orf52-202ENST00000397536 4717 ntAPPRIS ALT2 TSL 1 (best) BASIC14.75□□□□□ -0.05
SEC61A1P61619 ADAMTSL4-204ENST00000369041 2908 ntTSL 5 BASIC14.75□□□□□ -0.05
SEC61A1P61619 KIF26A-201ENST00000315264 6714 ntAPPRIS ALT2 TSL 1 (best) BASIC14.75□□□□□ -0.05
SEC61A1P61619 PLEKHA4-202ENST00000355496 2614 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
SEC61A1P61619 CHFR-203ENST00000432561 2648 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
SEC61A1P61619 SEPT11-203ENST00000502584 2615 ntAPPRIS ALT1 TSL 5 BASIC14.75□□□□□ -0.05
SEC61A1P61619 HOXD3-201ENST00000249440 2303 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
SEC61A1P61619 SVOPL-204ENST00000436657 1420 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
SEC61A1P61619 CFC1B-203ENST00000620207 1444 ntTSL 5 BASIC14.75□□□□□ -0.05
SEC61A1P61619 MFSD4B-201ENST00000368847 5958 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
SEC61A1P61619 BRF1-201ENST00000327359 2292 ntTSL 2 BASIC14.75□□□□□ -0.05
SEC61A1P61619 GALNT18-201ENST00000227756 2504 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
SEC61A1P61619 LGR6-205ENST00000439764 2487 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
SEC61A1P61619 TRIM11-201ENST00000284551 2715 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
SEC61A1P61619 EPS8-201ENST00000281172 4061 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
SEC61A1P61619 NCOA1-205ENST00000406961 7289 ntAPPRIS P4 TSL 5 BASIC14.74□□□□□ -0.05
SEC61A1P61619 LRRC57-204ENST00000563454 2407 ntAPPRIS P1 TSL 2 BASIC14.74□□□□□ -0.05
SEC61A1P61619 CPEB2-201ENST00000259997 5612 ntAPPRIS ALT2 TSL 5 BASIC14.74□□□□□ -0.05
SEC61A1P61619 SNCAIP-202ENST00000261368 3745 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
SEC61A1P61619 ZFP41-201ENST00000330701 4797 ntAPPRIS P1 TSL 2 BASIC14.74□□□□□ -0.05
SEC61A1P61619 COX10-201ENST00000261643 2873 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
SEC61A1P61619 PCCB-207ENST00000466072 1844 ntAPPRIS ALT2 TSL 3 BASIC14.74□□□□□ -0.05
SEC61A1P61619 TMEM237-213ENST00000621467 1824 ntAPPRIS ALT2 TSL 1 (best) BASIC14.74□□□□□ -0.05
SEC61A1P61619 TSSC2-204ENST00000529482 2337 ntTSL 2 BASIC14.74□□□□□ -0.05
SEC61A1P61619 MCRIP2-201ENST00000307650 946 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
SEC61A1P61619 MRPL52-202ENST00000355151 1118 ntAPPRIS ALT1 TSL 1 (best) BASIC14.74□□□□□ -0.05
SEC61A1P61619 ROMO1-203ENST00000374077 422 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
SEC61A1P61619 PCDH1-203ENST00000394536 3827 ntAPPRIS ALT2 TSL 1 (best) BASIC14.74□□□□□ -0.05
SEC61A1P61619 MRPL52-203ENST00000397496 1111 ntAPPRIS P3 TSL 2 BASIC14.74□□□□□ -0.05
SEC61A1P61619 MCFD2-208ENST00000409973 821 ntAPPRIS P1 TSL 2 BASIC14.74□□□□□ -0.05
SEC61A1P61619 AL022314.1-201ENST00000414203 464 ntTSL 5 BASIC14.74□□□□□ -0.05
SEC61A1P61619 LINC01237-203ENST00000430555 843 ntTSL 4 BASIC14.74□□□□□ -0.05
SEC61A1P61619 FAM197Y8-203ENST00000450145 560 ntBASIC14.74□□□□□ -0.05
SEC61A1P61619 AC099669.1-201ENST00000457331 456 ntTSL 3 BASIC14.74□□□□□ -0.05
SEC61A1P61619 MOK-208ENST00000519058 917 ntTSL 2 BASIC14.74□□□□□ -0.05
SEC61A1P61619 RAD52-211ENST00000536177 1139 ntAPPRIS ALT2 TSL 2 BASIC14.74□□□□□ -0.05
SEC61A1P61619 ATP5G2-204ENST00000549164 745 ntAPPRIS P1 TSL 3 BASIC14.74□□□□□ -0.05
SEC61A1P61619 MTDHP3-201ENST00000594186 672 ntBASIC14.74□□□□□ -0.05
SEC61A1P61619 ATP5G2-209ENST00000602871 668 ntAPPRIS P1 TSL 2 BASIC14.74□□□□□ -0.05
SEC61A1P61619 DEF8-228ENST00000610455 816 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
SEC61A1P61619 GRK6-202ENST00000355958 1789 ntAPPRIS ALT1 TSL 1 (best) BASIC14.74□□□□□ -0.05
SEC61A1P61619 ACTG1-208ENST00000575087 2001 ntAPPRIS P1 TSL 5 BASIC14.74□□□□□ -0.05
SEC61A1P61619 ZNF346-202ENST00000503039 2774 ntTSL 2 BASIC14.74□□□□□ -0.05
SEC61A1P61619 TAP2-202ENST00000374899 2497 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
SEC61A1P61619 SCOC-211ENST00000614192 1959 ntAPPRIS P2 TSL 1 (best) BASIC14.74□□□□□ -0.05
SEC61A1P61619 APOA4-201ENST00000357780 1473 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
SEC61A1P61619 TRMT2A-202ENST00000403707 2928 ntAPPRIS P3 TSL 1 (best) BASIC14.74□□□□□ -0.05
SEC61A1P61619 SARAF-201ENST00000256255 2154 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Retrieved 100 of 98,524 protein–RNA pairs in 24.7 ms