Protein–RNA interactions for Protein: P57055

RIPPLY3, Protein ripply3, humanhuman

Predictions only

Length 190 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RIPPLY3P57055 MRPL52-208ENST00000553711 586 ntTSL 3 BASIC13.93□□□□□ -0.18
RIPPLY3P57055 VASH1-204ENST00000554743 1096 ntTSL 3 BASIC13.93□□□□□ -0.18
RIPPLY3P57055 PSME1-205ENST00000559123 1033 ntTSL 5 BASIC13.93□□□□□ -0.18
RIPPLY3P57055 AC111170.2-201ENST00000585369 768 ntTSL 3 BASIC13.93□□□□□ -0.18
RIPPLY3P57055 SPCS2P2-201ENST00000603270 608 ntBASIC13.93□□□□□ -0.18
RIPPLY3P57055 RNA5-8SN1-201ENST00000610460 153 ntBASIC13.93□□□□□ -0.18
RIPPLY3P57055 RNA5-8SN5-202ENST00000612463 153 ntBASIC13.93□□□□□ -0.18
RIPPLY3P57055 RNA5-8SN4-201ENST00000613359 153 ntBASIC13.93□□□□□ -0.18
RIPPLY3P57055 RNA5-8SN5-201ENST00000619471 153 ntBASIC13.93□□□□□ -0.18
RIPPLY3P57055 DDX42-208ENST00000578681 4337 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
RIPPLY3P57055 SDCBP-201ENST00000260130 2167 ntAPPRIS P3 TSL 1 (best) BASIC13.93□□□□□ -0.18
RIPPLY3P57055 PLCB2-201ENST00000260402 4616 ntAPPRIS P3 TSL 2 BASIC13.93□□□□□ -0.18
RIPPLY3P57055 POLR1D-207ENST00000621089 1606 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
RIPPLY3P57055 NOVA2-201ENST00000263257 7803 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
RIPPLY3P57055 GNAS-203ENST00000306120 1878 ntBASIC13.93□□□□□ -0.18
RIPPLY3P57055 CRAMP1-201ENST00000293925 7671 ntAPPRIS P1 TSL 5 BASIC13.93□□□□□ -0.18
RIPPLY3P57055 ALDOA-212ENST00000564546 2104 ntAPPRIS P2 TSL 1 (best) BASIC13.93□□□□□ -0.18
RIPPLY3P57055 SATB2-202ENST00000417098 5730 ntAPPRIS P1 TSL 2 BASIC13.93□□□□□ -0.18
RIPPLY3P57055 NR4A2-204ENST00000409572 2878 ntAPPRIS P1 TSL 5 BASIC13.93□□□□□ -0.18
RIPPLY3P57055 LINC01185-202ENST00000452343 1705 ntTSL 2 BASIC13.93□□□□□ -0.18
RIPPLY3P57055 NR1H2-201ENST00000253727 1998 ntAPPRIS P2 TSL 1 (best) BASIC13.92□□□□□ -0.18
RIPPLY3P57055 ICA1-206ENST00000402384 2458 ntAPPRIS P3 TSL 2 BASIC13.92□□□□□ -0.18
RIPPLY3P57055 TRMT2A-203ENST00000404751 2498 ntAPPRIS ALT2 TSL 2 BASIC13.92□□□□□ -0.18
RIPPLY3P57055 AQP1-204ENST00000441328 2487 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
RIPPLY3P57055 PHACTR3-204ENST00000371015 2728 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
RIPPLY3P57055 SNRK-204ENST00000454177 2961 ntAPPRIS P1 TSL 2 BASIC13.92□□□□□ -0.18
RIPPLY3P57055 PROSER1-211ENST00000625998 5102 ntAPPRIS ALT2 TSL 5 BASIC13.92□□□□□ -0.18
RIPPLY3P57055 COMMD5-202ENST00000402718 1305 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
RIPPLY3P57055 CYB5R2-204ENST00000524790 1338 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
RIPPLY3P57055 FAM60A-203ENST00000454658 1555 ntAPPRIS P1 TSL 2 BASIC13.92□□□□□ -0.18
RIPPLY3P57055 DNAJA3-202ENST00000355296 2591 ntAPPRIS ALT1 TSL 1 (best) BASIC13.92□□□□□ -0.18
RIPPLY3P57055 AC118553.2-203ENST00000639037 2590 ntAPPRIS P5 TSL 5 BASIC13.92□□□□□ -0.18
RIPPLY3P57055 OSBPL1A-204ENST00000399443 3317 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
RIPPLY3P57055 STBD1-201ENST00000237642 3420 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
RIPPLY3P57055 FAM83E-201ENST00000263266 1926 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
RIPPLY3P57055 CROCCP3-202ENST00000420820 1947 ntBASIC13.92□□□□□ -0.18
RIPPLY3P57055 TM9SF1-203ENST00000524835 1938 ntTSL 2 BASIC13.92□□□□□ -0.18
RIPPLY3P57055 NAA30-204ENST00000556492 7644 ntAPPRIS P2 TSL 1 (best) BASIC13.92□□□□□ -0.18
RIPPLY3P57055 CPZ-203ENST00000382480 2538 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
RIPPLY3P57055 FBXO33-201ENST00000298097 3853 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
RIPPLY3P57055 IMP3-201ENST00000314852 2028 ntAPPRIS P1 TSL 2 BASIC13.92□□□□□ -0.18
RIPPLY3P57055 PRR5-ARHGAP8-201ENST00000352766 2043 ntAPPRIS P1 TSL 2 BASIC13.92□□□□□ -0.18
RIPPLY3P57055 WIPI2-201ENST00000288828 4476 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
RIPPLY3P57055 SMIM4-203ENST00000477703 1770 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
RIPPLY3P57055 TEPSIN-213ENST00000637944 1782 ntAPPRIS ALT2 TSL 5 BASIC13.92□□□□□ -0.18
RIPPLY3P57055 PCNX2-201ENST00000258229 7518 ntAPPRIS P2 TSL 5 BASIC13.92□□□□□ -0.18
RIPPLY3P57055 EFEMP2-210ENST00000528176 1504 ntTSL 5 BASIC13.92□□□□□ -0.18
RIPPLY3P57055 PHLDA2-201ENST00000314222 955 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
RIPPLY3P57055 C1QA-201ENST00000374642 1143 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
RIPPLY3P57055 AL355334.1-201ENST00000417713 215 ntBASIC13.92□□□□□ -0.18
RIPPLY3P57055 AFG3L1P-203ENST00000418696 2965 ntTSL 2 BASIC13.92□□□□□ -0.18
RIPPLY3P57055 AC093702.1-201ENST00000423433 367 ntTSL 3 BASIC13.92□□□□□ -0.18
RIPPLY3P57055 AC087294.1-202ENST00000439136 487 ntTSL 3 BASIC13.92□□□□□ -0.18
RIPPLY3P57055 AC091390.4-201ENST00000484974 491 ntTSL 3 BASIC13.92□□□□□ -0.18
RIPPLY3P57055 AGGF1-204ENST00000506806 1142 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
RIPPLY3P57055 TRMT112-206ENST00000544844 1106 ntAPPRIS P3 TSL 1 (best) BASIC13.92□□□□□ -0.18
RIPPLY3P57055 LINC01481-204ENST00000550216 494 ntTSL 2 BASIC13.92□□□□□ -0.18
RIPPLY3P57055 AC087294.1-201ENST00000580291 1152 ntTSL 2 BASIC13.92□□□□□ -0.18
RIPPLY3P57055 SPDYE12P-201ENST00000618416 771 ntBASIC13.92□□□□□ -0.18
RIPPLY3P57055 LINC00466-208ENST00000635218 1217 ntTSL 5 BASIC13.92□□□□□ -0.18
RIPPLY3P57055 TCEA1-201ENST00000396401 2718 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
RIPPLY3P57055 RNH1-204ENST00000397614 1864 ntAPPRIS P1 TSL 5 BASIC13.92□□□□□ -0.18
RIPPLY3P57055 CARD10-201ENST00000251973 3934 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
RIPPLY3P57055 LRCH2-202ENST00000538422 4868 ntAPPRIS ALT2 TSL 1 (best) BASIC13.92□□□□□ -0.18
RIPPLY3P57055 SLC2A10-201ENST00000359271 4389 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
RIPPLY3P57055 RAD51D-201ENST00000335858 1353 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
RIPPLY3P57055 PRDM14-201ENST00000276594 2344 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
RIPPLY3P57055 ERCC2-203ENST00000391944 2334 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
RIPPLY3P57055 TMEM59L-205ENST00000600490 1717 ntAPPRIS P1 TSL 5 BASIC13.92□□□□□ -0.18
RIPPLY3P57055 LONRF1-208ENST00000533751 3043 ntTSL 5 BASIC13.92□□□□□ -0.18
RIPPLY3P57055 GPC1-201ENST00000264039 3713 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
RIPPLY3P57055 VIPR1-201ENST00000325123 2773 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
RIPPLY3P57055 TUBGCP6-204ENST00000439308 6078 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
RIPPLY3P57055 NEXN-AS1-201ENST00000421331 2292 ntTSL 2 BASIC13.92□□□□□ -0.18
RIPPLY3P57055 LINC00271-201ENST00000421378 1580 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
RIPPLY3P57055 SKP2-208ENST00000546211 1589 ntTSL 5 BASIC13.92□□□□□ -0.18
RIPPLY3P57055 MTDH-201ENST00000336273 6177 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
RIPPLY3P57055 VEGFA-206ENST00000372077 2834 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
RIPPLY3P57055 RAD51C-215ENST00000583539 1319 ntAPPRIS ALT2 TSL 2 BASIC13.91□□□□□ -0.18
RIPPLY3P57055 ANKRD13D-216ENST00000514166 2138 ntTSL 2 BASIC13.91□□□□□ -0.18
RIPPLY3P57055 AC148477.3-202ENST00000376617 1766 ntTSL 2 BASIC13.91□□□□□ -0.18
RIPPLY3P57055 GOSR2-210ENST00000576910 1891 ntAPPRIS ALT1 TSL 5 BASIC13.91□□□□□ -0.18
RIPPLY3P57055 ZNF346-201ENST00000358149 2314 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
RIPPLY3P57055 FRMD5-202ENST00000417257 5011 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
RIPPLY3P57055 BAIAP2-204ENST00000428708 2095 ntAPPRIS ALT2 TSL 1 (best) BASIC13.91□□□□□ -0.18
RIPPLY3P57055 C11orf49-201ENST00000278460 1645 ntAPPRIS P3 TSL 1 (best) BASIC13.91□□□□□ -0.18
RIPPLY3P57055 DMKN-213ENST00000447113 1611 ntAPPRIS ALT2 TSL 1 (best) BASIC13.91□□□□□ -0.18
RIPPLY3P57055 DAB2IP-205ENST00000408936 6784 ntAPPRIS ALT2 TSL 5 BASIC13.91□□□□□ -0.18
RIPPLY3P57055 TSLP-203ENST00000420978 2621 ntAPPRIS ALT2 TSL 1 (best) BASIC13.91□□□□□ -0.18
RIPPLY3P57055 SMARCC2-201ENST00000267064 4076 ntAPPRIS P4 TSL 1 (best) BASIC13.91□□□□□ -0.18
RIPPLY3P57055 SLC9A1-203ENST00000374086 2183 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
RIPPLY3P57055 SLC34A2-202ENST00000503434 2174 ntAPPRIS ALT2 TSL 1 (best) BASIC13.91□□□□□ -0.18
RIPPLY3P57055 FAM208A-209ENST00000493960 5600 ntAPPRIS P2 TSL 5 BASIC13.91□□□□□ -0.18
RIPPLY3P57055 ABI3-202ENST00000419580 1718 ntAPPRIS P1 TSL 5 BASIC13.91□□□□□ -0.18
RIPPLY3P57055 TNXB-204ENST00000479795 2742 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
RIPPLY3P57055 SPAG11A-203ENST00000351436 534 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
RIPPLY3P57055 SPAG11B-204ENST00000361111 534 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
RIPPLY3P57055 SS18L1-202ENST00000370848 1238 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
RIPPLY3P57055 NPM2-202ENST00000381530 925 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
RIPPLY3P57055 PPP1R14B-202ENST00000392210 600 ntTSL 3 BASIC13.91□□□□□ -0.18
Retrieved 100 of 98,524 protein–RNA pairs in 31 ms